Non-Coding RNA Search

Ss1.1-Tra1-TCH01A040047.5

Sequence:


               
               TGGATTATCATGGTTTATCACAAGATACTGAATATATATAATTTCCTGTGGTGTACAGTA
GGACCTTGTTGTTTATCCATCCTGTATGTAATACTTTGCATCTGCTAATCCCAAGCTCCC
AATCCATTCCCCCTACCCCCACTGGCAACCACAGGTCTGTTCTCTGTCTCTGTGAAATGG
TTTCTGTTTCAGAGATAAGTTTGTCATATTTTAGATTCCACGTACAAGTGAAATCATATG
GTATTTGTCTTTCTCTGTCTTATTTCACTTACTATGATCATTTCTAGGTCCATCCTTGTT
GCTGTGTGTTTGTTTCTAAAGAATTTGAATATCACCAGATAACACACACTGTCTGTGATT
TGCCACAGGAGTTCTCCTTCCTGGGAGGCTGCACCAGATTCTTTTCATACATTCGTCTAC
AGAGGAAGTGGAGTTCAAGATGCATGGTCAGGCTTTGTGGGCTGTCCCCAAAGCATGGCG
CCTGCTTAAGTCCTTCCTACCCCTTCGTCTTGTGACTATAGAGCTCATTGTGGACAGTGG
GCATTTCCCTAAGCTCAGCCCTGCTTCTGGAGGAACAACTCCAAGTCTTGCTATGATGAC
AGTGGGTCACAAACCCCAGCCTTCTCTAGGGGACAGAGTCCTTTTCTTGCTGTTGCCACC
ACTGGAAGAAATGTGGGGCCAAAGGCAGATGTTAGGATTCTGACATGGTTTGCTGCAGTG
AGTACTGTTATGACAGAAAGGCCTGAGAAATGCCTTCACCTGCCCCACAATAGCCTGAGT
TGTGGTGCTTGGCTCACCTGGGCCAAGGAGTCCTGGAGCTGGATTGCTGGGTTCCAGCCT
CCTTTCGTTCCTTCCGAGGGGTGTGAACTGAGAGGCCTGGGTGGCTTCTTAGGGGTGAAG
CATGGTGAGCTGGACGAGGATGGAGGAAAAGCAACTGGAGATGCTCTTGACATTAATTTG
AGTTCCAGGAATGGGCCAGTAAATGCCAGTCCCGTGCTCAGATTAATGACTTGATGGACA
CAAGAAAGAGATACACCAGTTAATAGAGCTTAATAACCACTGATGTCAGGGTTGAGGGGA
GGGAAGGAATTCACGGCGAGCAACAGCTAAAGCCCTTCAGAGCATATTCCGCTGTGGGGC
ATTTTCCAGTTTGGGATTAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGATTATCATGGTTTATCACAAGATACTGAATATATATAATTTCCTGTGGTGTACAGTA
GGACCTTGTTGTTTATCCATCCTGTATGTAATACTTTGCATCTGCTAATCCCAAGCTCCC
AATCCATTCCCCCTACCCCCACTGGCAACCACAGGTCTGTTCTCTGTCTCTGTGAAATGG
TTTCTGTTTCAGAGATAAGTTTGTCATATTTTAGATTCCACGTACAAGTGAAATCATATG
GTATTTGTCTTTCTCTGTCTTATTTCACTTACTATGATCATTTCTAGGTCCATCCTTGTT
GCTGTGTGTTTGTTTCTAAAGAATTTGAATATCACCAGATAACACACACTGTCTGTGATT
TGCCACAGGAGTTCTCCTTCCTGGGAGGCTGCACCAGATTCTTTTCATACATTCGTCTAC
AGAGGAAGTGGAGTTCAAGATGCATGGTCAGGCTTTGTGGGCTGTCCCCAAAGCATGGCG
CCTGCTTAAGTCCTTCCTACCCCTTCGTCTTGTGACTATAGAGCTCATTGTGGACAGTGG
GCATTTCCCTAAGCTCAGCCCTGCTTCTGGAGGAACAACTCCAAGTCTTGCTATGATGAC
AGTGGGTCACAAACCCCAGCCTTCTCTAGGGGACAGAGTCCTTTTCTTGCTGTTGCCACC
ACTGGAAGAAATGTGGGGCCAAAGGCAGATGTTAGGATTCTGACATGGTTTGCTGCAGTG
AGTACTGTTATGACAGAAAGGCCTGAGAAATGCCTTCACCTGCCCCACAATAGCCTGAGT
TGTGGTGCTTGGCTCACCTGGGCCAAGGAGTCCTGGAGCTGGATTGCTGGGTTCCAGCCT
CCTTTCGTTCCTTCCGAGGGGTGTGAACTGAGAGGCCTGGGTGGCTTCTTAGGGGTGAAG
CATGGTGAGCTGGACGAGGATGGAGGAAAAGCAACTGGAGATGCTCTTGACATTAATTTG
AGTTCCAGGAATGGGCCAGTAAATGCCAGTCCCGTGCTCAGATTAATGACTTGATGGACA
CAAGAAAGAGATACACCAGTTAATAGAGCTTAATAACCACTGATGTCAGGGTTGAGGGGA
GGGAAGGAATTCACGGCGAGCAACAGCTAAAGCCCTTCAGAGCATATTCCGCTGTGGGGC
ATTTTCCAGTTTGGGATTAAAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               6-305, gnl|bosTau2|chr1 (88652738-88652426)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-305, gnl|bosTau2|chr1 (88652738-88652426)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cje (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cje (0.165235)