Non-Coding RNA Search

Ss1.1-Tra1-TCH01A040088.5

Sequence:


               
               GCAGATGCAACTGGCTGCGCGCGGGAGCCGGGCGCTAGTAGAGCGCAGCCGCGAGGGAGG
CGCGGAGGAGGAGAGCCAGAGCCGGAGTCCAAGCAGCAGCCTGTGTTGGCGGAGAGCACC
CGGGCGCAGCCGGAGCCGCAGCCGCGATGGCCGTGGCCGTGGGGAGACCGTCTAATGAAG
AGCTTCGAAACTTGTCCCTGTCTGGCCATGTTGGATTCGACAGTCTCCCCGACCAGCTGG
TCAACAAGTCTACGTCTCAAGGGTTCTGTTTCAACATCCTGTGTGTCGGCGAGACGGGCA
TTGGCAAATCCACGCTAATGGACACTTTATTCAACACCAAATTTGAAAGTGACCCAGCTA
CTCACAATGAACCGGGTGTCCGGTTAAAAGCCAGAAGTTATGAGCTTCAGGAAAGCAACG
TGCGGCTGAAGTTAACCATCGTGGACACCGTGGGCTTCGGAGACCAGATAAATAAGGATG
ACAGCTACAAGCCCATAGTGGAATATATCGATGCCCAGTTTGAAGCCTACTTGCAAGAGG
AATTGAAGATCAAACGTTCCCTCTTCAACTACCACGACACCAGGATCCACGCCTGTCTCT
ACTTTATCGCCCCAACCGGGCACTCGCTGAAGTCCCTGGACCTGGTCACCATGAAGAAGC
TGGACAGCAAGGTGAACATCATTCCAATCATTGCAAAAGCCGACACCATCGCCAAGAACG
AACTGCACAAGTTCAAGAGTAAGATCATGAGTGAACTGGTCAGNCATGGCGTCCAGATAT
ATCAGTTCCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGATGCAACTGGCTGCGCGCGGGAGCCGGGCGCTAGTAGAGCGCAGCCGCGAGGGAGG
CGCGGAGGAGGAGAGCCAGAGCCGGAGTCCAAGCAGCAGCCTGTGTTGGCGGAGAGCACC
CGGGCGCAGCCGGAGCCGCAGCCGCGATGGCCGTGGCCGTGGGGAGACCGTCTAATGAAG
AGCTTCGAAACTTGTCCCTGTCTGGCCATGTTGGATTCGACAGTCTCCCCGACCAGCTGG
TCAACAAGTCTACGTCTCAAGGGTTCTGTTTCAACATCCTGTGTGTCGGCGAGACGGGCA
TTGGCAAATCCACGCTAATGGACACTTTATTCAACACCAAATTTGAAAGTGACCCAGCTA
CTCACAATGAACCGGGTGTCCGGTTAAAAGCCAGAAGTTATGAGCTTCAGGAAAGCAACG
TGCGGCTGAAGTTAACCATCGTGGACACCGTGGGCTTCGGAGACCAGATAAATAAGGATG
ACAGCTACAAGCCCATAGTGGAATATATCGATGCCCAGTTTGAAGCCTACTTGCAAGAGG
AATTGAAGATCAAACGTTCCCTCTTCAACTACCACGACACCAGGATCCACGCCTGTCTCT
ACTTTATCGCCCCAACCGGGCACTCGCTGAAGTCCCTGGACCTGGTCACCATGAAGAAGC
TGGACAGCAAGGTGAACATCATTCCAATCATTGCAAAAGCCGACACCATCGCCAAGAACG
AACTGCACAAGTTCAAGAGTAAGATCATGAGTGAACTGGTCAGNCATGGCGTCCAGATAT
ATCAGTTCCCCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|57209159|emb|CAI41429.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57209159|emb|CAI41429.1|

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               134-790, gnl|bosTau2|chr16 (36125028-36125681)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               134-790, gnl|bosTau2|chr16 (36125028-36125681)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nlu (0.383362)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.383362)