Ss1.1-Tra1-TCH01A120005.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCCGCGGAGCGACGGCTCGGAGGCGGCGGCGTAGGCCACGGCGGGGCGTTTGGTTTCGC TTTGGCCCTGACTGGAGTTAGTATTGACGGTCGAAATGGGAGTCCCTAAGTTTTACCGAT GGATCTCTGAGAGATATCCCTGCCTCAGCGAAGTCGTGAAAGAGCATCAGATTCCTGAAT TTGATAACTTGTACCTGGATATGAATGGAATTATACATCAGTGTTCCCATCCTAATGATG ATGATGTTCACTTCAGAATTTCAGATGATAAAATCTTTACTGATATTTTTCACTACTTGG AAGTGTTGTTTCGCATTATTAAACCTAGGAAAGTATTCTTCATGGCTGTTGATGGTGTGG CTCCTCGAGCAAAGATGAACCAGCAGCGTGGGAGGCGTTTTCGGTCAGCAAAGGAAGCAG AAGACAAAATAAAAAAGGCAATAGAAAAAGGAGAAACTCTTCCCACGGAGGCCAGATTTG ATTCCAACTGCATTACACCAGGGACTGAATTCATGGCCAGGTTACATGAACATCTGAAGT ATTTTGTAAACATGAAAATTTCTACAGACAAGTCATGGCAAGGAGTTACCATCTATTTCT CAGGCCATGAGACTCCTGGAGAAGGAGAACATAAAATCATGGAATTTATCAGATCTGAGA AGGCAAAGCCAGATCATGATCCAAACACCAGACACTGTCTTTATGGCTTAGATGCTGACT TGATTATGCTTGGATTAACAAGTCATGAGGCACATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCCGCGGAGCGACGGCTCGGAGGCGGCGGCGTAGGCCACGGCGGGGCGTTTGGTTTCGC TTTGGCCCTGACTGGAGTTAGTATTGACGGTCGAAATGGGAGTCCCTAAGTTTTACCGAT GGATCTCTGAGAGATATCCCTGCCTCAGCGAAGTCGTGAAAGAGCATCAGATTCCTGAAT TTGATAACTTGTACCTGGATATGAATGGAATTATACATCAGTGTTCCCATCCTAATGATG ATGATGTTCACTTCAGAATTTCAGATGATAAAATCTTTACTGATATTTTTCACTACTTGG AAGTGTTGTTTCGCATTATTAAACCTAGGAAAGTATTCTTCATGGCTGTTGATGGTGTGG CTCCTCGAGCAAAGATGAACCAGCAGCGTGGGAGGCGTTTTCGGTCAGCAAAGGAAGCAG AAGACAAAATAAAAAAGGCAATAGAAAAAGGAGAAACTCTTCCCACGGAGGCCAGATTTG ATTCCAACTGCATTACACCAGGGACTGAATTCATGGCCAGGTTACATGAACATCTGAAGT ATTTTGTAAACATGAAAATTTCTACAGACAAGTCATGGCAAGGAGTTACCATCTATTTCT CAGGCCATGAGACTCCTGGAGAAGGAGAACATAAAATCATGGAATTTATCAGATCTGAGA AGGCAAAGCCAGATCATGATCCAAACACCAGACACTGTCTTTATGGCTTAGATGCTGACT TGATTATGCTTGGATTAACAAGTCATGAGGCACATT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 169-405, gnl|bosTau2|chr1 (78953277-78953513) | |
| 169-405, gnl|canFam2|chr23 (41176216-41176475) | |
| 169-405, gnl|danRer3|chr11 (8697016-8696758) | |
| 169-405, gnl|dasNov1|scaffold_24606 (6489-6232) | |
| 169-405, gnl|echTel1|scaffold_301956 (9168-9427) | |
| 169-405, gnl|fr1|chrUn (212315799-212315542) | |
| 169-405, gnl|galGal2|chr9 (3207067-3206818) | |
| 169-405, gnl|hg17|chr3 (143634194-143634452) | |
| 169-405, gnl|Hg17|chr3 (143634435-143634199) | |
| 169-405, gnl|loxAfr1|scaffold_2883 (68279-68536) | |
| 169-405, gnl|mm7|chr9 (95610041-95609784) | |
| 169-405, gnl|Mm7|chr9 (95609798-95610034) | |
| 169-405, gnl|monDom2|scaffold_28 (12918387-12918650) | |
| 169-405, gnl|oryCun1|scaffold_160969 (6261-6519) | |
| 169-405, gnl|panTro1|chr2 (146211023-146211281) | |
| 169-405, gnl|rheMac2|chr2 (145428371-145428113) | |
| 169-405, gnl|rn3|chr8 (101048128-101047871) | |
| 169-405, gnl|tetNig1|chrUn_random (16291240-16291481) | |
| 169-405, gnl|xenTro1|scaffold_1123 (251119-250869) | |
| 610-722, gnl|bosTau2|chr1 (78960322-78960434) | |
| 610-722, gnl|canFam2|chr23 (41170277-41170412) | |
| 610-722, gnl|danRer3|chr11 (8698722-8698605) | |
| 610-722, gnl|dasNov1|scaffold_24606 (11786-11648) | |
| 610-722, gnl|echTel1|scaffold_301956 (2703-2841) | |
| 610-722, gnl|fr1|chrUn (212316947-212316830) | |
| 610-722, gnl|galGal2|chr9 (3208888-3208773) | |
| 610-722, gnl|hg17|chr3 (143626740-143626875) | |
| 610-722, gnl|Hg17|chr3 (143626874-143626762) | |
| 610-722, gnl|loxAfr1|scaffold_2883 (60543-60681) | |
| 610-722, gnl|mm7|chr9 (95615413-95615275) | |
| 610-722, gnl|Mm7|chr9 (95615274-95615386) | |
| 610-722, gnl|monDom2|scaffold_28 (12905582-12905711) | |
| 610-722, gnl|oryCun1|scaffold_160969 (288-426) | |
| 610-722, gnl|panTro1|chr2 (146201818-146201953) | |
| 610-722, gnl|rheMac2|chr2 (145434054-145433919) | |
| 610-722, gnl|rn3|chr8 (101052671-101052533) | |
| 610-722, gnl|tetNig1|chrUn_random (16289976-16290093) | |
| 610-722, gnl|xenTro1|scaffold_1123 (252204-252084) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 169-405, gnl|bosTau2|chr1 (78953277-78953513) | |
| 169-405, gnl|canFam2|chr23 (41176216-41176475) | |
| 169-405, gnl|danRer3|chr11 (8697016-8696758) | |
| 169-405, gnl|dasNov1|scaffold_24606 (6489-6232) | |
| 169-405, gnl|echTel1|scaffold_301956 (9168-9427) | |
| 169-405, gnl|fr1|chrUn (212315799-212315542) | |
| 169-405, gnl|galGal2|chr9 (3207067-3206818) | |
| 169-405, gnl|hg17|chr3 (143634194-143634452) | |
| 169-405, gnl|Hg17|chr3 (143634435-143634199) | |
| 169-405, gnl|loxAfr1|scaffold_2883 (68279-68536) | |
| 169-405, gnl|mm7|chr9 (95610041-95609784) | |
| 169-405, gnl|Mm7|chr9 (95609798-95610034) | |
| 169-405, gnl|monDom2|scaffold_28 (12918387-12918650) | |
| 169-405, gnl|oryCun1|scaffold_160969 (6261-6519) | |
| 169-405, gnl|panTro1|chr2 (146211023-146211281) | |
| 169-405, gnl|rheMac2|chr2 (145428371-145428113) | |
| 169-405, gnl|rn3|chr8 (101048128-101047871) | |
| 169-405, gnl|tetNig1|chrUn_random (16291240-16291481) | |
| 169-405, gnl|xenTro1|scaffold_1123 (251119-250869) | |
| 610-722, gnl|bosTau2|chr1 (78960322-78960434) | |
| 610-722, gnl|canFam2|chr23 (41170277-41170412) | |
| 610-722, gnl|danRer3|chr11 (8698722-8698605) | |
| 610-722, gnl|dasNov1|scaffold_24606 (11786-11648) | |
| 610-722, gnl|echTel1|scaffold_301956 (2703-2841) | |
| 610-722, gnl|fr1|chrUn (212316947-212316830) | |
| 610-722, gnl|galGal2|chr9 (3208888-3208773) | |
| 610-722, gnl|hg17|chr3 (143626740-143626875) | |
| 610-722, gnl|Hg17|chr3 (143626874-143626762) | |
| 610-722, gnl|loxAfr1|scaffold_2883 (60543-60681) | |
| 610-722, gnl|mm7|chr9 (95615413-95615275) | |
| 610-722, gnl|Mm7|chr9 (95615274-95615386) | |
| 610-722, gnl|monDom2|scaffold_28 (12905582-12905711) | |
| 610-722, gnl|oryCun1|scaffold_160969 (288-426) | |
| 610-722, gnl|panTro1|chr2 (146201818-146201953) | |
| 610-722, gnl|rheMac2|chr2 (145434054-145433919) | |
| 610-722, gnl|rn3|chr8 (101052671-101052533) | |
| 610-722, gnl|tetNig1|chrUn_random (16289976-16290093) | |
| 610-722, gnl|xenTro1|scaffold_1123 (252204-252084) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |