Ss1.1-Tra1-TCH01B090011.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGTGTTCTTCTTCCTCTTCTTCCTTGGCGTGTGGCTGGTGGCCTACGGGGTGGCCACGGA GGGGCTCCTTCGGCCCCAGGACCGTAGCCTCCCTAGCATCCTGCGCCGCGTCTTCTACCG GCCCTACCTGCAAATCTTTGGGCAGATCCCCCAGGAGGACATGGACGTGGCCCTCATGGA GCATGTCAACTGTTCAAGTGAGCCGGGCTTCTGGGCGCGCCCAGCGGGAGCCCAGGCGGG CTCCTGCGTCTCACTTTACGCCAACTGGCTGGTAGTGCTCCTCCTGGTCATCTTCCTGCT GGTGGCCAACATCCTGCTGCTCAATTTGCTCATCGCGATGTTCAGCCACACCTTCGGCAA AGTTCAGGGCAACAGCGACCTCTACTGGAAGGCGCAGCGATACAGCCTCATCCGAGAATT TCACTCCAGGCCCGCGCTGGCCCCGCCCCTCATCGTCATCTCGCACGTGCGCTCCCTCAT CCGTCGACTGCGAAGGCGCCGGGCCCGCTTGCCATCTTCCCCAGAGCCATCTTCCCCAGA CTCCGAGCATTTTCGGGTCATCCTCTCGAAGGAAGCGGAGCGGAGGCTGTTGACCTGGGA GTCAGTGCAAAAGGAGAATTTCCTGCTGGCCTGTGCTCGGGACAATCGGGACAGTGACTC GGAACGTCTAAAGCGCACGTCCCAGAAGGTGGACACAGCGCTGAAGCAGCTGAGACAAAT CCGCGAGTATGAGCAGCGCCTGAAAGGGCTGGAACAGGAGGTCCAGCACTGTAGCCGCGT CCTGGGCTGGGTCGCTGAGGCCCTGAGCCGCTCTGCGTTGCTTCCCCCAGGAGGACCGCC GCCCCCAAGCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGTGTTCTTCTTCCTCTTCTTCCTTGGCGTGTGGCTGGTGGCCTACGGGGTGGCCACGGA GGGGCTCCTTCGGCCCCAGGACCGTAGCCTCCCTAGCATCCTGCGCCGCGTCTTCTACCG GCCCTACCTGCAAATCTTTGGGCAGATCCCCCAGGAGGACATGGACGTGGCCCTCATGGA GCATGTCAACTGTTCAAGTGAGCCGGGCTTCTGGGCGCGCCCAGCGGGAGCCCAGGCGGG CTCCTGCGTCTCACTTTACGCCAACTGGCTGGTAGTGCTCCTCCTGGTCATCTTCCTGCT GGTGGCCAACATCCTGCTGCTCAATTTGCTCATCGCGATGTTCAGCCACACCTTCGGCAA AGTTCAGGGCAACAGCGACCTCTACTGGAAGGCGCAGCGATACAGCCTCATCCGAGAATT TCACTCCAGGCCCGCGCTGGCCCCGCCCCTCATCGTCATCTCGCACGTGCGCTCCCTCAT CCGTCGACTGCGAAGGCGCCGGGCCCGCTTGCCATCTTCCCCAGAGCCATCTTCCCCAGA CTCCGAGCATTTTCGGGTCATCCTCTCGAAGGAAGCGGAGCGGAGGCTGTTGACCTGGGA GTCAGTGCAAAAGGAGAATTTCCTGCTGGCCTGTGCTCGGGACAATCGGGACAGTGACTC GGAACGTCTAAAGCGCACGTCCCAGAAGGTGGACACAGCGCTGAAGCAGCTGAGACAAAT CCGCGAGTATGAGCAGCGCCTGAAAGGGCTGGAACAGGAGGTCCAGCACTGTAGCCGCGT CCTGGGCTGGGTCGCTGAGGCCCTGAGCCGCTCTGCGTTGCTTCCCCCAGGAGGACCGCC GCCCCCAAGCCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 2-167, gnl|bosTau2|chr18 (48467141-48467306) | |
| 2-167, gnl|canFam2|chr1 (110156160-110155970) | |
| 2-167, gnl|danRer3|chr3 (27397591-27397404) | |
| 2-167, gnl|dasNov1|scaffold_45536 (3637-3827) | |
| 2-167, gnl|echTel1|scaffold_264486 (11389-11576) | |
| 2-167, gnl|fr1|chrUn (220027549-220027739) | |
| 2-167, gnl|hg17|chr19 (54395670-54395860) | |
| 2-167, gnl|Hg17|chr19 (54395689-54395854) | |
| 2-167, gnl|loxAfr1|scaffold_115055 (4130-3936) | |
| 2-167, gnl|mm7|chr7 (41484462-41484268) | |
| 2-167, gnl|Mm7|chr7 (41484437-41484272) | |
| 2-167, gnl|oryCun1|scaffold_164056 (4203-4016) | |
| 2-167, gnl|panTro1|chr20 (51750781-51750971) | |
| 2-167, gnl|rheMac2|chr19 (55476722-55476912) | |
| 2-167, gnl|rn3|chr1 (95857611-95857417) | |
| 2-167, gnl|tetNig1|chr15 (7142049-7141859) | |
| 2-167, gnl|xenTro1|scaffold_98 (1936968-1937158) | |
| 343-525, gnl|bosTau2|chr18 (48470095-48470277) | |
| 343-525, gnl|canFam2|chr1 (110150970-110150809) | |
| 343-525, gnl|danRer3|chr3 (27395504-27395360) | |
| 343-525, gnl|dasNov1|scaffold_45536 (4440-4601) | |
| 343-525, gnl|echTel1|scaffold_32833 (606-446) | |
| 343-525, gnl|fr1|chrUn (220028034-220028181) | |
| 343-525, gnl|hg17|chr19 (54405273-54405437) | |
| 343-525, gnl|Hg17|chr19 (54405275-54405460) | |
| 343-525, gnl|loxAfr1|scaffold_8655 (3898-3739) | |
| 343-525, gnl|mm7|chr7 (41481229-41481056) | |
| 343-525, gnl|Mm7|chr7 (41481225-41481031) | |
| 343-525, gnl|oryCun1|scaffold_199462 (9097-8933) | |
| 343-525, gnl|panTro1|chr20 (51762922-51763086) | |
| 343-525, gnl|rheMac2|chr19 (55485557-55485721) | |
| 343-525, gnl|rn3|chr1 (95853938-95853774) | |
| 343-525, gnl|tetNig1|chr15 (7141545-7141398) | |
| 343-525, gnl|xenTro1|scaffold_98 (1938181-1938330) | |
| 555-688, gnl|bosTau2|chr18 (48470574-48470707) | |
| 555-688, gnl|Hg17|chr19 (54405779-54405912) | |
| 555-688, gnl|Mm7|chr7 (41480808-41480675) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-167, gnl|bosTau2|chr18 (48467141-48467306) | |
| 2-167, gnl|canFam2|chr1 (110156160-110155970) | |
| 2-167, gnl|danRer3|chr3 (27397591-27397404) | |
| 2-167, gnl|dasNov1|scaffold_45536 (3637-3827) | |
| 2-167, gnl|echTel1|scaffold_264486 (11389-11576) | |
| 2-167, gnl|fr1|chrUn (220027549-220027739) | |
| 2-167, gnl|hg17|chr19 (54395670-54395860) | |
| 2-167, gnl|Hg17|chr19 (54395689-54395854) | |
| 2-167, gnl|loxAfr1|scaffold_115055 (4130-3936) | |
| 2-167, gnl|mm7|chr7 (41484462-41484268) | |
| 2-167, gnl|Mm7|chr7 (41484437-41484272) | |
| 2-167, gnl|oryCun1|scaffold_164056 (4203-4016) | |
| 2-167, gnl|panTro1|chr20 (51750781-51750971) | |
| 2-167, gnl|rheMac2|chr19 (55476722-55476912) | |
| 2-167, gnl|rn3|chr1 (95857611-95857417) | |
| 2-167, gnl|tetNig1|chr15 (7142049-7141859) | |
| 2-167, gnl|xenTro1|scaffold_98 (1936968-1937158) | |
| 343-525, gnl|bosTau2|chr18 (48470095-48470277) | |
| 343-525, gnl|canFam2|chr1 (110150970-110150809) | |
| 343-525, gnl|danRer3|chr3 (27395504-27395360) | |
| 343-525, gnl|dasNov1|scaffold_45536 (4440-4601) | |
| 343-525, gnl|echTel1|scaffold_32833 (606-446) | |
| 343-525, gnl|fr1|chrUn (220028034-220028181) | |
| 343-525, gnl|hg17|chr19 (54405273-54405437) | |
| 343-525, gnl|Hg17|chr19 (54405275-54405460) | |
| 343-525, gnl|loxAfr1|scaffold_8655 (3898-3739) | |
| 343-525, gnl|mm7|chr7 (41481229-41481056) | |
| 343-525, gnl|Mm7|chr7 (41481225-41481031) | |
| 343-525, gnl|oryCun1|scaffold_199462 (9097-8933) | |
| 343-525, gnl|panTro1|chr20 (51762922-51763086) | |
| 343-525, gnl|rheMac2|chr19 (55485557-55485721) | |
| 343-525, gnl|rn3|chr1 (95853938-95853774) | |
| 343-525, gnl|tetNig1|chr15 (7141545-7141398) | |
| 343-525, gnl|xenTro1|scaffold_98 (1938181-1938330) | |
| 555-688, gnl|bosTau2|chr18 (48470574-48470707) | |
| 555-688, gnl|Hg17|chr19 (54405779-54405912) | |
| 555-688, gnl|Mm7|chr7 (41480808-41480675) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) |