Ss1.1-Tra1-TCH01B110052.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACCACTTTGTGGAGTATGGCAGAACGGTGTGCATGTTTCGCACAGAGAAGATCCGGAAG CTTGTAGCCATGGGGATCCCTGAGTCTTTACGAGGCAAACTCTGGCTCCTTTTCTCAGAT GCCGTCACTGACCTCGCTGCACATCCCGGTTACTATGGTAACCTGGTGGAGGAGTCCATG GGAAAGTGTTGCCTGGTGACGGAGGAGATAGAGCGGGACCTGCACCGCTCCTTACCGGAG CACCCCGCCTTCCAAAACGAAACGGGAATCGCTGCTTTGAGGAGAGTCCTGACAGCCTAT GCCCACCGGAACCCCCAGATCGGGTACTGCCAGTCCATGAACATCCTGACCTCCGTTCTG CTGCTGTACGCCAAGGAGGAGGAAGCCTTCTGGCTGCTGGTTGCTGTGTGTGAGCGGATG CTGCCTGACTACTTCAACCACCGAGTCATTGGGGCCCAGGTAGACCAGTCCGTCTTTGAG GAGCTCATCAAGGAGCAGCTCCCTGAGCTGGCGGAGCACATGCAGGATCTCTCGGCCCTG GCGTCCATCTCCCTCTCCTGGTTCCTGACTCTGTTCCTCAGCATCATGCCCCTGGAGAGC GCGGTGAACGTGGTCGACTGCTTCTTCTATGACGGCATCAAAGCCATCTTCCAGCTGGGG CTGGCCGTGCTGGAGGCCAACGCCGAGGACCTGTGCCGCAGCAAGGACGACGGCCAGGCC CTGATGGTCCTCAGCAGGTTTCTGGATCACATTAAGAACGAGGACAGCCCTGGACCCCCG GTTGGCAGCCACCATGCCTTTTTCTCCGACGACCAGGAGCCCTGTCCTGTGACCGACATT GCTGACCTGATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACCACTTTGTGGAGTATGGCAGAACGGTGTGCATGTTTCGCACAGAGAAGATCCGGAAG CTTGTAGCCATGGGGATCCCTGAGTCTTTACGAGGCAAACTCTGGCTCCTTTTCTCAGAT GCCGTCACTGACCTCGCTGCACATCCCGGTTACTATGGTAACCTGGTGGAGGAGTCCATG GGAAAGTGTTGCCTGGTGACGGAGGAGATAGAGCGGGACCTGCACCGCTCCTTACCGGAG CACCCCGCCTTCCAAAACGAAACGGGAATCGCTGCTTTGAGGAGAGTCCTGACAGCCTAT GCCCACCGGAACCCCCAGATCGGGTACTGCCAGTCCATGAACATCCTGACCTCCGTTCTG CTGCTGTACGCCAAGGAGGAGGAAGCCTTCTGGCTGCTGGTTGCTGTGTGTGAGCGGATG CTGCCTGACTACTTCAACCACCGAGTCATTGGGGCCCAGGTAGACCAGTCCGTCTTTGAG GAGCTCATCAAGGAGCAGCTCCCTGAGCTGGCGGAGCACATGCAGGATCTCTCGGCCCTG GCGTCCATCTCCCTCTCCTGGTTCCTGACTCTGTTCCTCAGCATCATGCCCCTGGAGAGC GCGGTGAACGTGGTCGACTGCTTCTTCTATGACGGCATCAAAGCCATCTTCCAGCTGGGG CTGGCCGTGCTGGAGGCCAACGCCGAGGACCTGTGCCGCAGCAAGGACGACGGCCAGGCC CTGATGGTCCTCAGCAGGTTTCTGGATCACATTAAGAACGAGGACAGCCCTGGACCCCCG GTTGGCAGCCACCATGCCTTTTTCTCCGACGACCAGGAGCCCTGTCCTGTGACCGACATT GCTGACCTGATT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 111-333, gnl|bosTau2|chr17 (10561187-10560965) | |
| 111-333, gnl|canFam2|chr19 (5225328-5225086) | |
| 111-333, gnl|danRer3|chr1 (52406869-52407106) | |
| 111-333, gnl|dasNov1|scaffold_180702 (3596-3839) | |
| 111-333, gnl|echTel1|scaffold_288136 (109107-108864) | |
| 111-333, gnl|fr1|chrUn (194137752-194137507) | |
| 111-333, gnl|galGal2|chr4 (30207228-30207452) | |
| 111-333, gnl|hg17|chr4 (141940649-141940891) | |
| 111-333, gnl|Hg17|chr4 (141940874-141940652) | |
| 111-333, gnl|loxAfr1|scaffold_1307 (82223-81979) | |
| 111-333, gnl|mm7|chr8 (81818540-81818302) | |
| 111-333, gnl|Mm7|chr8 (81818313-81818535) | |
| 111-333, gnl|monDom2|scaffold_9 (8597570-8597814) | |
| 111-333, gnl|oryCun1|scaffold_210994 (142758-142516) | |
| 111-333, gnl|panTro1|chr3 (159201399-159201641) | |
| 111-333, gnl|rheMac2|chr5 (133115056-133115298) | |
| 111-333, gnl|rn3|chr19 (26599870-26600112) | |
| 111-333, gnl|tetNig1|chr18 (6611188-6611415) | |
| 111-333, gnl|xenTro1|scaffold_429 (770217-770440) | |
| 451-739, gnl|bosTau2|chr17 (10557429-10557141) | |
| 451-739, gnl|canFam2|chr19 (5230122-5229886) | |
| 451-739, gnl|danRer3|chr1 (52403466-52403698) | |
| 451-739, gnl|dasNov1|scaffold_928 (91710-91936) | |
| 451-739, gnl|echTel1|scaffold_288136 (115555-115323) | |
| 451-739, gnl|fr1|chrUn (194138309-194138077) | |
| 451-739, gnl|galGal2|chr4 (30204375-30204610) | |
| 451-739, gnl|hg17|chr4 (141936279-141936516) | |
| 451-739, gnl|Hg17|chr4 (141936572-141936284) | |
| 451-739, gnl|loxAfr1|scaffold_1307 (87260-87023) | |
| 451-739, gnl|mm7|chr8 (81823840-81823603) | |
| 451-739, gnl|Mm7|chr8 (81823545-81823833) | |
| 451-739, gnl|monDom2|scaffold_9 (8593760-8593996) | |
| 451-739, gnl|oryCun1|scaffold_210994 (147256-147019) | |
| 451-739, gnl|panTro1|chr3 (159197021-159197258) | |
| 451-739, gnl|rheMac2|chr5 (133110983-133111220) | |
| 451-739, gnl|rn3|chr19 (26594732-26594968) | |
| 451-739, gnl|tetNig1|chr18 (6610630-6610860) | |
| 451-739, gnl|xenTro1|scaffold_429 (767264-767497) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 111-333, gnl|bosTau2|chr17 (10561187-10560965) | |
| 111-333, gnl|canFam2|chr19 (5225328-5225086) | |
| 111-333, gnl|danRer3|chr1 (52406869-52407106) | |
| 111-333, gnl|dasNov1|scaffold_180702 (3596-3839) | |
| 111-333, gnl|echTel1|scaffold_288136 (109107-108864) | |
| 111-333, gnl|fr1|chrUn (194137752-194137507) | |
| 111-333, gnl|galGal2|chr4 (30207228-30207452) | |
| 111-333, gnl|hg17|chr4 (141940649-141940891) | |
| 111-333, gnl|Hg17|chr4 (141940874-141940652) | |
| 111-333, gnl|loxAfr1|scaffold_1307 (82223-81979) | |
| 111-333, gnl|mm7|chr8 (81818540-81818302) | |
| 111-333, gnl|Mm7|chr8 (81818313-81818535) | |
| 111-333, gnl|monDom2|scaffold_9 (8597570-8597814) | |
| 111-333, gnl|oryCun1|scaffold_210994 (142758-142516) | |
| 111-333, gnl|panTro1|chr3 (159201399-159201641) | |
| 111-333, gnl|rheMac2|chr5 (133115056-133115298) | |
| 111-333, gnl|rn3|chr19 (26599870-26600112) | |
| 111-333, gnl|tetNig1|chr18 (6611188-6611415) | |
| 111-333, gnl|xenTro1|scaffold_429 (770217-770440) | |
| 451-739, gnl|bosTau2|chr17 (10557429-10557141) | |
| 451-739, gnl|canFam2|chr19 (5230122-5229886) | |
| 451-739, gnl|danRer3|chr1 (52403466-52403698) | |
| 451-739, gnl|dasNov1|scaffold_928 (91710-91936) | |
| 451-739, gnl|echTel1|scaffold_288136 (115555-115323) | |
| 451-739, gnl|fr1|chrUn (194138309-194138077) | |
| 451-739, gnl|galGal2|chr4 (30204375-30204610) | |
| 451-739, gnl|hg17|chr4 (141936279-141936516) | |
| 451-739, gnl|Hg17|chr4 (141936572-141936284) | |
| 451-739, gnl|loxAfr1|scaffold_1307 (87260-87023) | |
| 451-739, gnl|mm7|chr8 (81823840-81823603) | |
| 451-739, gnl|Mm7|chr8 (81823545-81823833) | |
| 451-739, gnl|monDom2|scaffold_9 (8593760-8593996) | |
| 451-739, gnl|oryCun1|scaffold_210994 (147256-147019) | |
| 451-739, gnl|panTro1|chr3 (159197021-159197258) | |
| 451-739, gnl|rheMac2|chr5 (133110983-133111220) | |
| 451-739, gnl|rn3|chr19 (26594732-26594968) | |
| 451-739, gnl|tetNig1|chr18 (6610630-6610860) | |
| 451-739, gnl|xenTro1|scaffold_429 (767264-767497) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.126502) |