Ss1.1-Tra1-TCH01C050017.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCCAAGCGCTGGCTAAAGCTAGAGAAGGTCCCGGCGCCTGGAACACACCATGCCCAAGT GGAACGTCCGACGTCCCGGCCGCTTGCTAGGACTGCTGCTGCTGGTGATCTTGAGCTTCC TGGTGCTCCGCAGGTTGAACTGGAGCAGCCTGGCCCCCTCATGGCTGAGACACCGGCAGT TGGGGCTGCAGGCCAAGGACCAGAACTTCATGCTGGAGGACTCGGCTTTCTGGATCTTCG GGGGCTCTGTCCATTACTTCCGAGTGCCCAGGGCATATTGGAGGGACCGGCTGCTGAAGA TGAAGGCCTGCGGTCTGAACACCCTGACCACCTACGTTCCCTGGAACCTCCACGAGCCAG AAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACATGGAGGCCTTCATCCTGCTGGCTG CAGAGGTTGGGTTGTGGGTGATCCTTCGTCCGGGCCCCTACATCTGCAGTGAGATTGACC TCGGGGGCCTGCCCAGCTGGCTTCTCCAAGACTCCAGCATGAAGCTGAGGACAACTTACG AGGGCTTCACGAAAGCAGTGGACCTTTATTTTGACCACCTGATGGCCAGGGTGGTGCCAC TCCAGTACAAGAATGGAGGACCCATCATTGCTGTGCAGGTGGAGAATGAGTACGGCTCCT ATAACAAAGACCCTGCCTACATGCCTTATATCAAGAAAGCCTTGGAGGACCGGGGTATTG TGGAGCTGCTCTTGACCTCAGACAACGAGGATGGCCTGAGCAAGGGCACGGTGGATGGAG TGCTGGCCACCATCAACTTACAGTCACAAAATGAGCTGCGCTTGTTACACAACTTTCTCC AGAGTGTCCAGGGCGTCCGGCCCAAGATGGTGATGGAGTACTGGACGGGCTGGTTTGACT CATGGGGCGGCCCCCACCACATCCTGGATACCTCAGAAGTGTTGAGGACAGTGTCTGCCA TCATTGACGCTGGCGCCTCTATCAACCTCTACATGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCCAAGCGCTGGCTAAAGCTAGAGAAGGTCCCGGCGCCTGGAACACACCATGCCCAAGT GGAACGTCCGACGTCCCGGCCGCTTGCTAGGACTGCTGCTGCTGGTGATCTTGAGCTTCC TGGTGCTCCGCAGGTTGAACTGGAGCAGCCTGGCCCCCTCATGGCTGAGACACCGGCAGT TGGGGCTGCAGGCCAAGGACCAGAACTTCATGCTGGAGGACTCGGCTTTCTGGATCTTCG GGGGCTCTGTCCATTACTTCCGAGTGCCCAGGGCATATTGGAGGGACCGGCTGCTGAAGA TGAAGGCCTGCGGTCTGAACACCCTGACCACCTACGTTCCCTGGAACCTCCACGAGCCAG AAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACATGGAGGCCTTCATCCTGCTGGCTG CAGAGGTTGGGTTGTGGGTGATCCTTCGTCCGGGCCCCTACATCTGCAGTGAGATTGACC TCGGGGGCCTGCCCAGCTGGCTTCTCCAAGACTCCAGCATGAAGCTGAGGACAACTTACG AGGGCTTCACGAAAGCAGTGGACCTTTATTTTGACCACCTGATGGCCAGGGTGGTGCCAC TCCAGTACAAGAATGGAGGACCCATCATTGCTGTGCAGGTGGAGAATGAGTACGGCTCCT ATAACAAAGACCCTGCCTACATGCCTTATATCAAGAAAGCCTTGGAGGACCGGGGTATTG TGGAGCTGCTCTTGACCTCAGACAACGAGGATGGCCTGAGCAAGGGCACGGTGGATGGAG TGCTGGCCACCATCAACTTACAGTCACAAAATGAGCTGCGCTTGTTACACAACTTTCTCC AGAGTGTCCAGGGCGTCCGGCCCAAGATGGTGATGGAGTACTGGACGGGCTGGTTTGACT CATGGGGCGGCCCCCACCACATCCTGGATACCTCAGAAGTGTTGAGGACAGTGTCTGCCA TCATTGACGCTGGCGCCTCTATCAACCTCTACATGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 128-331, gnl|bosTau2|chr15 (53567564-53567767) | |
| 128-331, gnl|Hg17|chr11 (133717853-133718055) | |
| 128-331, gnl|Mm7|chr9 (26679592-26679389) | |
| 495-612, gnl|bosTau2|chr15 (53571900-53572018) | |
| 495-612, gnl|canFam2|chr5 (3776522-3776404) | |
| 495-612, gnl|danRer3|chr8 (34275556-34275443) | |
| 495-612, gnl|dasNov1|scaffold_49848 (4279-4157) | |
| 495-612, gnl|echTel1|scaffold_298687 (68980-69102) | |
| 495-612, gnl|fr1|chrUn (253116393-253116277) | |
| 495-612, gnl|galGal2|chr24 (2506426-2506539) | |
| 495-612, gnl|hg17|chr11 (133722428-133722550) | |
| 495-612, gnl|Hg17|chr11 (133722427-133722543) | |
| 495-612, gnl|loxAfr1|scaffold_8283 (34632-34755) | |
| 495-612, gnl|mm7|chr9 (26674876-26674754) | |
| 495-612, gnl|Mm7|chr9 (26674875-26674757) | |
| 495-612, gnl|monDom2|scaffold_15 (25275064-25275186) | |
| 495-612, gnl|oryCun1|scaffold_162518 (549-428) | |
| 495-612, gnl|panTro1|chr9 (135959836-135959958) | |
| 495-612, gnl|rheMac2|chr14 (132381167-132381289) | |
| 495-612, gnl|rn3|chr8 (26404761-26404639) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 128-331, gnl|bosTau2|chr15 (53567564-53567767) | |
| 128-331, gnl|Hg17|chr11 (133717853-133718055) | |
| 128-331, gnl|Mm7|chr9 (26679592-26679389) | |
| 495-612, gnl|bosTau2|chr15 (53571900-53572018) | |
| 495-612, gnl|canFam2|chr5 (3776522-3776404) | |
| 495-612, gnl|danRer3|chr8 (34275556-34275443) | |
| 495-612, gnl|dasNov1|scaffold_49848 (4279-4157) | |
| 495-612, gnl|echTel1|scaffold_298687 (68980-69102) | |
| 495-612, gnl|fr1|chrUn (253116393-253116277) | |
| 495-612, gnl|galGal2|chr24 (2506426-2506539) | |
| 495-612, gnl|hg17|chr11 (133722428-133722550) | |
| 495-612, gnl|Hg17|chr11 (133722427-133722543) | |
| 495-612, gnl|loxAfr1|scaffold_8283 (34632-34755) | |
| 495-612, gnl|mm7|chr9 (26674876-26674754) | |
| 495-612, gnl|Mm7|chr9 (26674875-26674757) | |
| 495-612, gnl|monDom2|scaffold_15 (25275064-25275186) | |
| 495-612, gnl|oryCun1|scaffold_162518 (549-428) | |
| 495-612, gnl|panTro1|chr9 (135959836-135959958) | |
| 495-612, gnl|rheMac2|chr14 (132381167-132381289) | |
| 495-612, gnl|rn3|chr8 (26404761-26404639) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |