Non-Coding RNA Search

Ss1.1-Tra1-TCH01C060011.5

Sequence:


               
               TATTTCTCCAAAATCTTATGTAAGGCAAATTGACAGACAGTAATTTTTCTAGATGTTCTT
CTTGTTTCTTATAAATCAGTTAATGACAACTTCTAACTCCCAGATTTTTAGCTATTTTCA
CTCTCCAACTTCCCTTCCAGACAAGAAGTCATATTTGTGATGAAACATTTAAGTGAAGCA
GAAAGTATATGGAAGAAGAGAACTTCATCTTCTTCTATGAAATGAAATTCTTTTTAATGC
ACATAATCACTCTGATCTCAGCTTTTGTTAAAAAGCAGCATATTTTAGACATTTGCTGTC
TTGAATGGCATGATAACTGTATGGTGGGCTGCAGCCAGATGGTGAGAGTAGCATATGTGA
ATGAGGACAGCCAGATGGACGCTTTCTAGCCCTGATGGTGGTCCATAAGAGGGGTTCGTT
CTGGGCCTGAGAATTCTCTTGGGAAGTTCATTTAGAGTTTTCTCTGGACAGGACATGGAT
TTGTACTTTTATAAACAGCTAAAGAACAGAAGGTCTGTTTTTATTTTTTAAGGATGACTT
TGTATATCTTCACTGTGGGAGCCAAGTCCAGTTTTGTGTGATTGTTACCATCTTGCCAGG
CCTGTCCTTTCAGTAAAGTCAAGAGTCCTGATTCCCTGGGCCTGGCTGTTCTGCTTGGCT
GGCGGGCTTTTCTCAGTAGTACATTTCTCTCCTCCAGTGCCCCTGGTTTCCAGAATATGC
CCAAATGATGTCTGTCGCATTTGGAAAAGTGGTGCCAAGCTGCGTGTGGATATCACATTG
CTGGGATTTGAGAACATGAGCTGGATAAGAGGGAGGCGGAGTTTTATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTTCTCCAAAATCTTATGTAAGGCAAATTGACAGACAGTAATTTTTCTAGATGTTCTT
CTTGTTTCTTATAAATCAGTTAATGACAACTTCTAACTCCCAGATTTTTAGCTATTTTCA
CTCTCCAACTTCCCTTCCAGACAAGAAGTCATATTTGTGATGAAACATTTAAGTGAAGCA
GAAAGTATATGGAAGAAGAGAACTTCATCTTCTTCTATGAAATGAAATTCTTTTTAATGC
ACATAATCACTCTGATCTCAGCTTTTGTTAAAAAGCAGCATATTTTAGACATTTGCTGTC
TTGAATGGCATGATAACTGTATGGTGGGCTGCAGCCAGATGGTGAGAGTAGCATATGTGA
ATGAGGACAGCCAGATGGACGCTTTCTAGCCCTGATGGTGGTCCATAAGAGGGGTTCGTT
CTGGGCCTGAGAATTCTCTTGGGAAGTTCATTTAGAGTTTTCTCTGGACAGGACATGGAT
TTGTACTTTTATAAACAGCTAAAGAACAGAAGGTCTGTTTTTATTTTTTAAGGATGACTT
TGTATATCTTCACTGTGGGAGCCAAGTCCAGTTTTGTGTGATTGTTACCATCTTGCCAGG
CCTGTCCTTTCAGTAAAGTCAAGAGTCCTGATTCCCTGGGCCTGGCTGTTCTGCTTGGCT
GGCGGGCTTTTCTCAGTAGTACATTTCTCTCCTCCAGTGCCCCTGGTTTCCAGAATATGC
CCAAATGATGTCTGTCGCATTTGGAAAAGTGGTGCCAAGCTGCGTGTGGATATCACATTG
CTGGGATTTGAGAACATGAGCTGGATAAGAGGGAGGCGGAGTTTTATA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               2-342, gnl|bosTau2|chr17 (36008961-36009302)
               

               
               2-342, gnl|Hg17|chr12 (108917892-108918575)
               


               
               370-827, gnl|bosTau2|chr17 (36009294-36009749)
               

               
               370-827, gnl|Hg17|chr12 (108918567-108918999)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-342, gnl|bosTau2|chr17 (36008961-36009302)
               

               
               2-342, gnl|Hg17|chr12 (108917892-108918575)
               


               
               370-827, gnl|bosTau2|chr17 (36009294-36009749)
               

               
               370-827, gnl|Hg17|chr12 (108918567-108918999)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	2-342, gnl\|bosTau2\|chr17 (36008961-36009302)
	2-342, gnl\|Hg17\|chr12 (108917892-108918575)

	370-827, gnl\|bosTau2\|chr17 (36009294-36009749)
	370-827, gnl\|Hg17\|chr12 (108918567-108918999)