Ss1.1-Tra1-TCH01C080070.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGCTCAAAGCCAGTGCTGCCCCCGCCCCCGGGCTCCTAGACCGAATGGCCGCCCCTGCC TCCGTCTGTCCCACCCGGGCCCGGACTCTCGACTACCGCCAGCGTAGCCACGCCCCCTGG CGCTGAACGCGGGGGGCCAGCGAGGGCCTGGTCACCCCACCTATATCGCTCCCCCACTAA GGAAAAGGCGCAGGCGCCTCACGCAGCCTCTCTGCATCTTTCAAGCCCTCGTAGGTGCTT TCCTCGCTACCATCCTCTCCGCCCCCGCGCGGTCCGGAGCCGGCCGGCTGGGTGGCCAGG TGGGTGGGCGCAACCTCCTGAGCCCTGCTCCCGAAGGGTCTCTTGGTGGCGGCTGCCCTG TTGCCTCCCTGATGGCACATAGGGCTGAGCCCCCCGACGGGGGCTGGGGATGGATGGTGG TGCTCTCAGCGTTCTTCCAGTCGGCGCTGGTGTTCGGGGTGCTCCGCTCCTTCGGCGTCT TCTTTGTGGAGTTTGTGGCGGCGTTTGAGGAGCAGGCGGCGCGAGTCTCCTGGATCGCTT CCATAGGAATCGCGGTGCAGCAGTTCGGGAGCCCAGTGGGCAGTGCCCTGAGCACGAAGT TCGGACCCAGGCCTGTGGTGATGGCTGGAGGCATCTTGGCTGCATTAGGGATGCTGCTCG CCTCCTTTGCTACCTCTTTGACCCACCTGTACCTGAGTATTGGGCTGCTCTCAGGATCTG GCTGGGCCTTGACCTTCACTCCAACCCTGGCCTGCCTGTCCCGTTACTTCTCTCGCCGGC GGTCCCTGGCCACCGGGCTGGCGCTGACGGGCGTGGGCCTGTCCTCCTTTGCTTTTGCCC CACTCTTCCAATGGCTGCTCAGCCACTATGCCTGGCGGGGGGCCCTACTGCTGGTGTCTG CCCTCTCCCTCCACTTGGTGGCCTGTGGTGCTCTGCTCCGCCCACTCTCCCTGGCTGAGG ACCCTGCTGTGGGTGGCCCCGGGGCCCAGCTCACCTGCCTCCTCCATCACGGCCCCTTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGCTCAAAGCCAGTGCTGCCCCCGCCCCCGGGCTCCTAGACCGAATGGCCGCCCCTGCC TCCGTCTGTCCCACCCGGGCCCGGACTCTCGACTACCGCCAGCGTAGCCACGCCCCCTGG CGCTGAACGCGGGGGGCCAGCGAGGGCCTGGTCACCCCACCTATATCGCTCCCCCACTAA GGAAAAGGCGCAGGCGCCTCACGCAGCCTCTCTGCATCTTTCAAGCCCTCGTAGGTGCTT TCCTCGCTACCATCCTCTCCGCCCCCGCGCGGTCCGGAGCCGGCCGGCTGGGTGGCCAGG TGGGTGGGCGCAACCTCCTGAGCCCTGCTCCCGAAGGGTCTCTTGGTGGCGGCTGCCCTG TTGCCTCCCTGATGGCACATAGGGCTGAGCCCCCCGACGGGGGCTGGGGATGGATGGTGG TGCTCTCAGCGTTCTTCCAGTCGGCGCTGGTGTTCGGGGTGCTCCGCTCCTTCGGCGTCT TCTTTGTGGAGTTTGTGGCGGCGTTTGAGGAGCAGGCGGCGCGAGTCTCCTGGATCGCTT CCATAGGAATCGCGGTGCAGCAGTTCGGGAGCCCAGTGGGCAGTGCCCTGAGCACGAAGT TCGGACCCAGGCCTGTGGTGATGGCTGGAGGCATCTTGGCTGCATTAGGGATGCTGCTCG CCTCCTTTGCTACCTCTTTGACCCACCTGTACCTGAGTATTGGGCTGCTCTCAGGATCTG GCTGGGCCTTGACCTTCACTCCAACCCTGGCCTGCCTGTCCCGTTACTTCTCTCGCCGGC GGTCCCTGGCCACCGGGCTGGCGCTGACGGGCGTGGGCCTGTCCTCCTTTGCTTTTGCCC CACTCTTCCAATGGCTGCTCAGCCACTATGCCTGGCGGGGGGCCCTACTGCTGGTGTCTG CCCTCTCCCTCCACTTGGTGGCCTGTGGTGCTCTGCTCCGCCCACTCTCCCTGGCTGAGG ACCCTGCTGTGGGTGGCCCCGGGGCCCAGCTCACCTGCCTCCTCCATCACGGCCCCTTCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 52-571, gnl|bosTau2|chr19 (14693739-14694248) | |
| 52-571, gnl|Hg17|chr17 (6880105-6880625) | |
| 52-571, gnl|Mm7|chr11 (70302514-70302052) | |
| 712-1020, gnl|bosTau2|chr19 (14695177-14695485) | |
| 712-1020, gnl|canFam2|chr5 (35057109-35057360) | |
| 712-1020, gnl|danRer3|chr7 (9611243-9610991) | |
| 712-1020, gnl|dasNov1|scaffold_82116 (4566-4817) | |
| 712-1020, gnl|echTel1|scaffold_69325 (2897-2649) | |
| 712-1020, gnl|fr1|chrUn (11533808-11533550) | |
| 712-1020, gnl|galGal2|chrUn (112880429-112880198) | |
| 712-1020, gnl|hg17|chr17 (6882173-6882424) | |
| 712-1020, gnl|Hg17|chr17 (6882192-6882500) | |
| 712-1020, gnl|loxAfr1|scaffold_74430 (12454-12203) | |
| 712-1020, gnl|mm7|chr11 (70300932-70300677) | |
| 712-1020, gnl|Mm7|chr11 (70300907-70300599) | |
| 712-1020, gnl|monDom2|scaffold_66 (3987967-3988212) | |
| 712-1020, gnl|oryCun1|scaffold_121699 (1235-1490) | |
| 712-1020, gnl|panTro1|chr19_random (44875978-44875727) | |
| 712-1020, gnl|rheMac2|chr16 (6751368-6751619) | |
| 712-1020, gnl|rn3|chr10 (57072087-57071832) | |
| 712-1020, gnl|tetNig1|chrUn_random (46678613-46678858) | |
| 712-1020, gnl|xenTro1|scaffold_394 (213787-214030) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 52-571, gnl|bosTau2|chr19 (14693739-14694248) | |
| 52-571, gnl|Hg17|chr17 (6880105-6880625) | |
| 52-571, gnl|Mm7|chr11 (70302514-70302052) | |
| 712-1020, gnl|bosTau2|chr19 (14695177-14695485) | |
| 712-1020, gnl|canFam2|chr5 (35057109-35057360) | |
| 712-1020, gnl|danRer3|chr7 (9611243-9610991) | |
| 712-1020, gnl|dasNov1|scaffold_82116 (4566-4817) | |
| 712-1020, gnl|echTel1|scaffold_69325 (2897-2649) | |
| 712-1020, gnl|fr1|chrUn (11533808-11533550) | |
| 712-1020, gnl|galGal2|chrUn (112880429-112880198) | |
| 712-1020, gnl|hg17|chr17 (6882173-6882424) | |
| 712-1020, gnl|Hg17|chr17 (6882192-6882500) | |
| 712-1020, gnl|loxAfr1|scaffold_74430 (12454-12203) | |
| 712-1020, gnl|mm7|chr11 (70300932-70300677) | |
| 712-1020, gnl|Mm7|chr11 (70300907-70300599) | |
| 712-1020, gnl|monDom2|scaffold_66 (3987967-3988212) | |
| 712-1020, gnl|oryCun1|scaffold_121699 (1235-1490) | |
| 712-1020, gnl|panTro1|chr19_random (44875978-44875727) | |
| 712-1020, gnl|rheMac2|chr16 (6751368-6751619) | |
| 712-1020, gnl|rn3|chr10 (57072087-57071832) | |
| 712-1020, gnl|tetNig1|chrUn_random (46678613-46678858) | |
| 712-1020, gnl|xenTro1|scaffold_394 (213787-214030) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |