Ss1.1-Tra1-TCH01C090033.5
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GATCGCCATCGAGAGCCTGGCTGACCGCGTCTACACCAGCAAGAGCGACGTGTGGTCCTT
TGGGGTGACAATGTGGGAGATTGCCACACGAGGTCAAACCCCATATCCAGGAGTGGAGAA
CAGCGAGATTTATGACTACCTGCGCCAGGGAAACCGCCTGAAGCAGCCTGTGGACTGTCT
GGATGGACTGTATGCCCTGATGTCGCGATGCTGGGAGCTAAACCCCCGGGACCGGCCAAG
CTTTGCAGAGCTGCGGGAAGATCTGGAGAACACGCTGAAGGCCCTGCCTCCCGCCCAGGA
GCCCGACGAAATCCTCTATGTCAACATGGATGAGGGTGGGGGTCATCCGGAACCACTTGG
AGCTGCTGGAGGAGCTGACCCCCCAACCCAGCCTGACCCCAAGGATTCCTGCAGCTGCCT
CACTGCTGCTGAGGTCCATCCTGCTGGACGCTATGTCCTCTGCCCGTCTACAGCCCCTGG
CCCCACCCTGCCTGCTGACAGGAGCTCCCCAGCATCCCCAGGGCAGGAGGATGGCGCCTG
AGACAAACTTCCACCTGGAACTCCTTCTCAGGACCCAAGCTAGGCACTGCCACAGGGGAA
CCCCCTGACTCTCCCACTCCAGGCCTTACCTCCAACCATAGCCCCCTCTTCCTACTCCAT
CCCAGACAGGCCCTCCCCCTTTTCCACACCTTAGTGTCCCTGTGTGTCAAAGGAAGGGAT
TGGACTGCAAACCTTAAGGATCCTCCCAGTTCGAACATTCCAAGGTTCTAGATTCTAAGC
TGTAAAGAGTCTAGATTGAGAGGTTCTAAGTTTCAAAGATGAGTCTTTGGTTCTAAGGGC
CTGAAATTCCAAAGTCTCTAATTCTAAAATGCTAAGGTTCTAGACATGGAAGTTCTAAGG
CCTATCTTCTAAGGCTCTGAGCTTCTATGGCTCTAGATTTTTCTGGTTCTAAGATTCTGG
ATAAAGCCTGCAAGATTTTAGGTTCCAAAGCTCTAAGATTCTAATTCCAGGATCTAAGGC
TCTATAATTCTAGATTTTATTTTTCTAGGGTTCTGAGTCCTTAGGGTATAAGATTCTAGA
TTCTATAATTCTAAAAATTCTACAGTTCCAGACACGGAGGTTCTAAGGCCTAAAGTTCTA
TCATTTGATGTTCTGAGCCTCTCAGAGTACAAATTCTCTGGCTATAAGACTCTAGATCAT
AAGCCTTCAAGATCTGATCTTCTCAAGTTTTAAGATTCTAATGATGGTCAATTAAAGGTT
CCATGGCTTTATGATCCTCAAAACTTTTGTTATGATATTCTGGATCCTAAAGATCTAAGA
TTCTAGAATCTGCAGTGCAAAAGTTTTAAGAGTCTAAAGATGGAGGTTCTAAGGTCTAAT
GTTCTAGATGTGATATTCTAAGACTTAGTCTAAGAACCTAGATTCTCTATGTCAAAGATT
CCAGATCATATGCTTCAAGATTCTAGATTATTAAACTCTAAGATTCTAAAAAAAAAAAAA
TCTGTGTTCCAAGGCACTCTAGATTTTGTTGGTCCAAGATTCTGGATCCCTTAGCATCTG
TGGTATAAGGCTCTACAGTTGGTGGTGACTATCCAGAGGCCTAAGTTTTAATCATTTCTA
ACTTTGGACACCTTCAAGTTCTGTGCTGCATCCTGTCTTTCTAGGACTTTAGTTAAGGGT
CCAAGAAGTCACAGTTCTAAATCTTAAGGTTCTAGGCACTAGAGTTCTAAGATTCACATG
TGGTAAGTTTCTTAAGGTCTACAGGTCTAGAATTCCAAGGTAACCTTACAGAATTAGCCT
GTGTGACCCTTCCCTTCTTAGCCACCTCTGTTTCCTCTTGTGGGGGCATGCCCCCTCAAA
CCTGTGCAATGCATTAGGGTTGCCTCTTTTCCTCAGAGGACAATCTCCCTCCTTTTGGGC
CATGCTGCCCCCCCTGAGCCAGTCCCTCATGCCCCC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GATCGCCATCGAGAGCCTGGCTGACCGCGTCTACACCAGCAAGAGCGACGTGTGGTCCTT
TGGGGTGACAATGTGGGAGATTGCCACACGAGGTCAAACCCCATATCCAGGAGTGGAGAA
CAGCGAGATTTATGACTACCTGCGCCAGGGAAACCGCCTGAAGCAGCCTGTGGACTGTCT
GGATGGACTGTATGCCCTGATGTCGCGATGCTGGGAGCTAAACCCCCGGGACCGGCCAAG
CTTTGCAGAGCTGCGGGAAGATCTGGAGAACACGCTGAAGGCCCTGCCTCCCGCCCAGGA
GCCCGACGAAATCCTCTATGTCAACATGGATGAGGGTGGGGGTCATCCGGAACCACTTGG
AGCTGCTGGAGGAGCTGACCCCCCAACCCAGCCTGACCCCAAGGATTCCTGCAGCTGCCT
CACTGCTGCTGAGGTCCATCCTGCTGGACGCTATGTCCTCTGCCCGTCTACAGCCCCTGG
CCCCACCCTGCCTGCTGACAGGAGCTCCCCAGCATCCCCAGGGCAGGAGGATGGCGCCTG
AGACAAACTTCCACCTGGAACTCCTTCTCAGGACCCAAGCTAGGCACTGCCACAGGGGAA
CCCCCTGACTCTCCCACTCCAGGCCTTACCTCCAACCATAGCCCCCTCTTCCTACTCCAT
CCCAGACAGGCCCTCCCCCTTTTCCACACCTTAGTGTCCCTGTGTGTCAAAGGAAGGGAT
TGGACTGCAAACCTTAAGGATCCTCCCAGTTCGAACATTCCAAGGTTCTAGATTCTAAGC
TGTAAAGAGTCTAGATTGAGAGGTTCTAAGTTTCAAAGATGAGTCTTTGGTTCTAAGGGC
CTGAAATTCCAAAGTCTCTAATTCTAAAATGCTAAGGTTCTAGACATGGAAGTTCTAAGG
CCTATCTTCTAAGGCTCTGAGCTTCTATGGCTCTAGATTTTTCTGGTTCTAAGATTCTGG
ATAAAGCCTGCAAGATTTTAGGTTCCAAAGCTCTAAGATTCTAATTCCAGGATCTAAGGC
TCTATAATTCTAGATTTTATTTTTCTAGGGTTCTGAGTCCTTAGGGTATAAGATTCTAGA
TTCTATAATTCTAAAAATTCTACAGTTCCAGACACGGAGGTTCTAAGGCCTAAAGTTCTA
TCATTTGATGTTCTGAGCCTCTCAGAGTACAAATTCTCTGGCTATAAGACTCTAGATCAT
AAGCCTTCAAGATCTGATCTTCTCAAGTTTTAAGATTCTAATGATGGTCAATTAAAGGTT
CCATGGCTTTATGATCCTCAAAACTTTTGTTATGATATTCTGGATCCTAAAGATCTAAGA
TTCTAGAATCTGCAGTGCAAAAGTTTTAAGAGTCTAAAGATGGAGGTTCTAAGGTCTAAT
GTTCTAGATGTGATATTCTAAGACTTAGTCTAAGAACCTAGATTCTCTATGTCAAAGATT
CCAGATCATATGCTTCAAGATTCTAGATTATTAAACTCTAAGATTCTAAAAAAAAAAAAA
TCTGTGTTCCAAGGCACTCTAGATTTTGTTGGTCCAAGATTCTGGATCCCTTAGCATCTG
TGGTATAAGGCTCTACAGTTGGTGGTGACTATCCAGAGGCCTAAGTTTTAATCATTTCTA
ACTTTGGACACCTTCAAGTTCTGTGCTGCATCCTGTCTTTCTAGGACTTTAGTTAAGGGT
CCAAGAAGTCACAGTTCTAAATCTTAAGGTTCTAGGCACTAGAGTTCTAAGATTCACATG
TGGTAAGTTTCTTAAGGTCTACAGGTCTAGAATTCCAAGGTAACCTTACAGAATTAGCCT
GTGTGACCCTTCCCTTCTTAGCCACCTCTGTTTCCTCTTGTGGGGGCATGCCCCCTCAAA
CCTGTGCAATGCATTAGGGTTGCCTCTTTTCCTCAGAGGACAATCTCCCTCCTTTTGGGC
CATGCTGCCCCCCCTGAGCCAGTCCCTCATGCCCCC
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52-191, gnl|bosTau2|chr18 (45748275-45748414) |
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52-191, gnl|canFam2|chr1 (115610926-115610773) |
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52-191, gnl|danRer3|chr5 (39150458-39150311) |
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52-191, gnl|dasNov1|scaffold_22567 (41824-41671) |
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52-191, gnl|echTel1|scaffold_67639 (2473-2338) |
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52-191, gnl|fr1|chrUn (97582676-97582529) |
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52-191, gnl|galGal2|chr3 (3120270-3120419) |
|
52-191, gnl|hg17|chr19 (46455233-46455386) |
|
52-191, gnl|Hg17|chr19 (46455237-46455376) |
|
52-191, gnl|loxAfr1|scaffold_162048 (4122-3974) |
|
52-191, gnl|mm7|chr7 (22534926-22534773) |
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52-191, gnl|Mm7|chr7 (22534920-22534781) |
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52-191, gnl|monDom2|scaffold_149 (817833-817986) |
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52-191, gnl|oryCun1|scaffold_214968 (70276-70129) |
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52-191, gnl|panTro1|chr20 (43439387-43439540) |
|
52-191, gnl|rheMac2|chr19 (47647649-47647802) |
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52-191, gnl|rn3|chr1 (81045015-81044862) |
|
52-191, gnl|tetNig1|chr16 (6220318-6220165) |
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52-191, gnl|xenTro1|scaffold_679 (198828-198976) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
52-191, gnl|bosTau2|chr18 (45748275-45748414) |
|
52-191, gnl|canFam2|chr1 (115610926-115610773) |
|
52-191, gnl|danRer3|chr5 (39150458-39150311) |
|
52-191, gnl|dasNov1|scaffold_22567 (41824-41671) |
|
52-191, gnl|echTel1|scaffold_67639 (2473-2338) |
|
52-191, gnl|fr1|chrUn (97582676-97582529) |
|
52-191, gnl|galGal2|chr3 (3120270-3120419) |
|
52-191, gnl|hg17|chr19 (46455233-46455386) |
|
52-191, gnl|Hg17|chr19 (46455237-46455376) |
|
52-191, gnl|loxAfr1|scaffold_162048 (4122-3974) |
|
52-191, gnl|mm7|chr7 (22534926-22534773) |
|
52-191, gnl|Mm7|chr7 (22534920-22534781) |
|
52-191, gnl|monDom2|scaffold_149 (817833-817986) |
|
52-191, gnl|oryCun1|scaffold_214968 (70276-70129) |
|
52-191, gnl|panTro1|chr20 (43439387-43439540) |
|
52-191, gnl|rheMac2|chr19 (47647649-47647802) |
|
52-191, gnl|rn3|chr1 (81045015-81044862) |
|
52-191, gnl|tetNig1|chr16 (6220318-6220165) |
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52-191, gnl|xenTro1|scaffold_679 (198828-198976) |
|
hea (0.408998) |
|
gul (0.355177) |
|
jca (0.34188) |
|
bla (0.248694) |
|
tes (0.207814) |
|
aor (0.195274) |
|
fbs (0.175346) |
|
rec (0.17307) |
|
fat (0.147427) |
|
ski (0.146735) |
|
lin (0.145603) |
|
hyp (0.142837) |
|
cst (0.140036) |
|
hlv (0.139256) |
|
pla (0.133672) |
|
ova (0.129132) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
ecc (0.115035) |
|
spc (0.113366) |
|
hea (0.408998) |
|
gul (0.355177) |
|
jca (0.34188) |
|
bla (0.248694) |
|
tes (0.207814) |
|
aor (0.195274) |
|
fbs (0.175346) |
|
rec (0.17307) |
|
fat (0.147427) |
|
ski (0.146735) |
|
lin (0.145603) |
|
hyp (0.142837) |
|
cst (0.140036) |
|
hlv (0.139256) |
|
pla (0.133672) |
|
ova (0.129132) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
ecc (0.115035) |
|
spc (0.113366) |
