Non-Coding RNA Search

Ss1.1-Tra1-TCH01C110062.5

Sequence:


               
               AGGAGGGCGAGGCTGGGGGTGCTGCCAGGAGGTGGCACTGGGCGTCAAAGAAACCTATTA
AAACCAGCAGGAACCAGAGGGGCCTGCGTGAGACCAGGGGACAAAGGGAGTCAAGGGAAA
GATCTGTCCCACGAAGTCATGGATGGAAGTGGGACAGGTGGCAGGGCCTCGGGGATGGGA
TCTGGGGGAGGCCAGCACCTCTAAGTCATCCCCACCAAAGGAAGGCATAGCTGGTGGACC
AAGTCTCTGGAAAGGGGTGTTTGGTCTGAGTAGATGCAGTTTGAGGGGCCTGGATGGGCT
ACAGGGAGACACTGGGCTGTGTCTGGATCCTTCTCCCTGCGTTGTTCTTTGCCAGAGATA
TATTTTTAAAAAAGTTTTGTTCTCATTAAAGTTAGTGTGGGTTTCAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAGGGCGAGGCTGGGGGTGCTGCCAGGAGGTGGCACTGGGCGTCAAAGAAACCTATTA
AAACCAGCAGGAACCAGAGGGGCCTGCGTGAGACCAGGGGACAAAGGGAGTCAAGGGAAA
GATCTGTCCCACGAAGTCATGGATGGAAGTGGGACAGGTGGCAGGGCCTCGGGGATGGGA
TCTGGGGGAGGCCAGCACCTCTAAGTCATCCCCACCAAAGGAAGGCATAGCTGGTGGACC
AAGTCTCTGGAAAGGGGTGTTTGGTCTGAGTAGATGCAGTTTGAGGGGCCTGGATGGGCT
ACAGGGAGACACTGGGCTGTGTCTGGATCCTTCTCCCTGCGTTGTTCTTTGCCAGAGATA
TATTTTTAAAAAAGTTTTGTTCTCATTAAAGTTAGTGTGGGTTTCAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               28-297, gnl|bosTau2|chr11 (7736368-7736096)
               

               
               28-297, gnl|Hg17|chr2 (74695936-74696220)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               28-297, gnl|bosTau2|chr11 (7736368-7736096)
               

               
               28-297, gnl|Hg17|chr2 (74695936-74696220)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cly (0.241284)
               

               
               lnt (0.142308)
               

               
               med (0.116252)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.241284)
               

               
               lnt (0.142308)
               

               
               med (0.116252)

	28-297, gnl\|bosTau2\|chr11 (7736368-7736096)
	28-297, gnl\|Hg17\|chr2 (74695936-74696220)