Non-Coding RNA Search

Ss1.1-Tra1-TCH01D030098.5

Sequence:


               
               ATATAGAAATGA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------AAAACAAAACAAAACAAAACAAAAAAAACCAAAACG
GTGGTTATGTGTATTTTTTGCTAATTATGATTTCTGCACAGAGAAAATCCTGGAAATAAA
AGTCTTTTACAGACTCCCAAAATCCCATTTAAAGTAAAGAAAAGTTGGAGTTCCTGCTGT
GGCACAGTGGGTTAAGACTCCAACTGCAGTGGCTCAGGTCACTGCTGAGGCACAGGTTCA
TTACCTAGCCTGGTGTGGTGGGATAAGGATCCAGCATTGCCCACAGCTGTGGCATAGGTC
GCAGCTGTGGCTTAGATTCAGTGCCTGGCAAAGGAACTTACATATGCTTCAGGTACACAA
AAGCAAAAGAAGAAAAAGTAAAGAAAAGCCGAAGGGAATTTTGGATTATTTATTATTACC
ATAAATACCAGGCACCGTTATGTACAATTTGAAAAGGTGTGGAGAAACACATGGGCCAGC
TTTCTGAATTAATGGAATTATTTTCTTTCTCCATGTGTTCTGTCCTCTTTATTTCGGTAA
TCATGTAATTATTCTTTTACTGTCATTTAAATCTTAGGAATAGTGATTTCATGCTTTAAA
TAATTATTTTCTACCATATGCTAATAACTTAAGGTGGTTTTTCCTCCTGCCCAGTCTTAC
TCTGGGAGTCTTTTGCAATAAAAACAATAGTAACAGTTAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATATAGAAATGA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------AAAACAAAACAAAACAAAACAAAAAAAACCAAAACG
GTGGTTATGTGTATTTTTTGCTAATTATGATTTCTGCACAGAGAAAATCCTGGAAATAAA
AGTCTTTTACAGACTCCCAAAATCCCATTTAAAGTAAAGAAAAGTTGGAGTTCCTGCTGT
GGCACAGTGGGTTAAGACTCCAACTGCAGTGGCTCAGGTCACTGCTGAGGCACAGGTTCA
TTACCTAGCCTGGTGTGGTGGGATAAGGATCCAGCATTGCCCACAGCTGTGGCATAGGTC
GCAGCTGTGGCTTAGATTCAGTGCCTGGCAAAGGAACTTACATATGCTTCAGGTACACAA
AAGCAAAAGAAGAAAAAGTAAAGAAAAGCCGAAGGGAATTTTGGATTATTTATTATTACC
ATAAATACCAGGCACCGTTATGTACAATTTGAAAAGGTGTGGAGAAACACATGGGCCAGC
TTTCTGAATTAATGGAATTATTTTCTTTCTCCATGTGTTCTGTCCTCTTTATTTCGGTAA
TCATGTAATTATTCTTTTACTGTCATTTAAATCTTAGGAATAGTGATTTCATGCTTTAAA
TAATTATTTTCTACCATATGCTAATAACTTAAGGTGGTTTTTCCTCCTGCCCAGTCTTAC
TCTGGGAGTCTTTTGCAATAAAAACAATAGTAACAGTTAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               369-686, gnl|bosTau2|chr19 (32644399-32644095)
               

               
               369-686, gnl|Hg17|chr17 (43038194-43038801)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               369-686, gnl|bosTau2|chr19 (32644399-32644095)
               

               
               369-686, gnl|Hg17|chr17 (43038194-43038801)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               cly (0.120642)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               cly (0.120642)

	369-686, gnl\|bosTau2\|chr19 (32644399-32644095)
	369-686, gnl\|Hg17\|chr17 (43038194-43038801)