Ss1.1-Tra1-TCH01E020075.5
               |  | CAGAGAGCGTGGTGAAGAAAACAGGCTTCTTTGTAAACCGCCCCGATTCTTACTGTAGCA
TTTTGCGGCCAGATGAAAAGTGGAATGAACTAGGAGGATGTGTGATTCCCACCGGTCGCC
TGCAGACTGGTGTTCTTCGAACCAACTGTGTGGACTGTTTGGATCGCACCAACACGGCAC
AGTTTATGGTGGGGAAATGTGCTCTAGCTTATCAACTGTATTCCTTGGGATTAATTGACA
AACCAAATCTACAGTTTGATACAGATGCAGTTAGGTTATTTGAGGAACTCTATGAAGATC
ATGGGGATACCCTGTCCCTTCAGTACGGGGGTTCTCAGCTTGTTCATCGCGTAAAAACCT
ACAGAAAGATAGCGCCGTGGACCCAGCACTCAAAAGACATCATGCAGACCCTGTCTAGAT
ATTACAGCAATGCTTTTTCAGATGCTGATAGACAAGATTCCATTAATCTCTTCCTAGGAG
TTTTCCATCCCACTGAGGGGAAACCTCACCTCTGGGAACTCCCGACAGATTTTTATCTGC
ATCATAAAAACACCATGCGACTTTTAGCAACAAGAAGAAGTTATACTTACTGGTGGACAC
CAGAGGTAATAAAATATTTACCGCTGCCTTATGATGAAGTTATCTGTGCTGCGAACTTGA
AGAAGTTGATAGTGAAGAAATTTCACAAATATGAAGAGGAGATAGACATCCACAACGAGT
TCTTTCGACCACACGAGCTGAGCAGTTTTGATGATACGTTTTGCTTGGCTATGACAAGTT
CAGCACGTGACTTTATGCCTAAGACCGTTGGCATTGACCCAAGTCCGTTTACTGTGCGTA
AGCCAGACGAAACCGGAAAATCAGTATTGGGAAACAAGAGCAACAGAGAAGAAGCTGTGC
TACAGCGGAAAACAGCTGCCAGCGCCCCGCCTCCCCCCAGTGAGGAAGCCGCGTCCAGCA
GCTCCGAGGATGACTCGGGCACCGACCGGGAGGATGAGGGCTCTGTGTCCCAGCGCTCCA
CTCCAGTGAAGATGACCGACACGGGCGACAGTGCCAAAGTGACAGAGAATGTGGTCCAGC
CCATGAAAGAGGTGTATGGAATTAACCTCTCAGAGGGCCTCTCAGAAGAGGATCTCTCCA
TTTATTTAAGATTTGAGCAACTGGGACAGAGTCAACATAGGCAAGACAAGAGCAGCCAGC
AGTTCTGTTCAAGGTGCCCAGATGGAGTTATAAAACTAACACCCATCTCAGCTTTCTCAC
AAGACAACATCTATGAAGTTCAGCCCCCAAGAGTAGACAGAAAATCTACAGAGATCTTCC
AAGCCCACATCCAGGCCAGTCAAGGTATTATGCAGCCCCTTGGGAAAGAAGACACCTCTA
TGTACCGAGAATACATCCGAAACCGCTACCTGTGAAGAGACTACAGGTCCCTGTAGTGGC
CCAGAAAAAGTCCCCTGTTTGTCTCATCTTCACAAAGGGAATTTCCCATCAATCCTCTAC
ATCAGAAGGTTTTCCCTCTTTTTGTAACTGGTGAATTACAGATCATTGGTAATAAAGAAA | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CAGAGAGCGTGGTGAAGAAAACAGGCTTCTTTGTAAACCGCCCCGATTCTTACTGTAGCA
TTTTGCGGCCAGATGAAAAGTGGAATGAACTAGGAGGATGTGTGATTCCCACCGGTCGCC
TGCAGACTGGTGTTCTTCGAACCAACTGTGTGGACTGTTTGGATCGCACCAACACGGCAC
AGTTTATGGTGGGGAAATGTGCTCTAGCTTATCAACTGTATTCCTTGGGATTAATTGACA
AACCAAATCTACAGTTTGATACAGATGCAGTTAGGTTATTTGAGGAACTCTATGAAGATC
ATGGGGATACCCTGTCCCTTCAGTACGGGGGTTCTCAGCTTGTTCATCGCGTAAAAACCT
ACAGAAAGATAGCGCCGTGGACCCAGCACTCAAAAGACATCATGCAGACCCTGTCTAGAT
ATTACAGCAATGCTTTTTCAGATGCTGATAGACAAGATTCCATTAATCTCTTCCTAGGAG
TTTTCCATCCCACTGAGGGGAAACCTCACCTCTGGGAACTCCCGACAGATTTTTATCTGC
ATCATAAAAACACCATGCGACTTTTAGCAACAAGAAGAAGTTATACTTACTGGTGGACAC
CAGAGGTAATAAAATATTTACCGCTGCCTTATGATGAAGTTATCTGTGCTGCGAACTTGA
AGAAGTTGATAGTGAAGAAATTTCACAAATATGAAGAGGAGATAGACATCCACAACGAGT
TCTTTCGACCACACGAGCTGAGCAGTTTTGATGATACGTTTTGCTTGGCTATGACAAGTT
CAGCACGTGACTTTATGCCTAAGACCGTTGGCATTGACCCAAGTCCGTTTACTGTGCGTA
AGCCAGACGAAACCGGAAAATCAGTATTGGGAAACAAGAGCAACAGAGAAGAAGCTGTGC
TACAGCGGAAAACAGCTGCCAGCGCCCCGCCTCCCCCCAGTGAGGAAGCCGCGTCCAGCA
GCTCCGAGGATGACTCGGGCACCGACCGGGAGGATGAGGGCTCTGTGTCCCAGCGCTCCA
CTCCAGTGAAGATGACCGACACGGGCGACAGTGCCAAAGTGACAGAGAATGTGGTCCAGC
CCATGAAAGAGGTGTATGGAATTAACCTCTCAGAGGGCCTCTCAGAAGAGGATCTCTCCA
TTTATTTAAGATTTGAGCAACTGGGACAGAGTCAACATAGGCAAGACAAGAGCAGCCAGC
AGTTCTGTTCAAGGTGCCCAGATGGAGTTATAAAACTAACACCCATCTCAGCTTTCTCAC
AAGACAACATCTATGAAGTTCAGCCCCCAAGAGTAGACAGAAAATCTACAGAGATCTTCC
AAGCCCACATCCAGGCCAGTCAAGGTATTATGCAGCCCCTTGGGAAAGAAGACACCTCTA
TGTACCGAGAATACATCCGAAACCGCTACCTGTGAAGAGACTACAGGTCCCTGTAGTGGC
CCAGAAAAAGTCCCCTGTTTGTCTCATCTTCACAAAGGGAATTTCCCATCAATCCTCTAC
ATCAGAAGGTTTTCCCTCTTTTTGTAACTGGTGAATTACAGATCATTGGTAATAAAGAAA | 
               |  | 271-441, gnl|bosTau2|chr9 (23324251-23324421) | 
               |  | 271-441, gnl|canFam2|chr12 (69601010-69601199) | 
               |  | 271-441, gnl|danRer3|chr13 (46559753-46559935) | 
               |  | 271-441, gnl|dasNov1|scaffold_24914 (46430-46619) | 
               |  | 271-441, gnl|echTel1|scaffold_28228 (6265-6073) | 
               |  | 271-441, gnl|fr1|chrUn (22978007-22978194) | 
               |  | 271-441, gnl|galGal2|chr3 (65224188-65223999) | 
               |  | 271-441, gnl|hg17|chr6 (110194611-110194800) | 
               |  | 271-441, gnl|Hg17|chr6 (110194621-110194791) | 
               |  | 271-441, gnl|loxAfr1|scaffold_23095 (19718-19534) | 
               |  | 271-441, gnl|mm7|chr10 (41067944-41067755) | 
               |  | 271-441, gnl|Mm7|chr10 (41067932-41067762) | 
               |  | 271-441, gnl|monDom2|scaffold_0 (110478898-110478709) | 
               |  | 271-441, gnl|panTro1|chr5 (112509103-112509292) | 
               |  | 271-441, gnl|rheMac2|chr4 (154169423-154169234) | 
               |  | 271-441, gnl|rn3|chr20 (45210758-45210569) | 
               |  | 271-441, gnl|tetNig1|chr14 (2698819-2699003) | 
               |  | 271-441, gnl|xenTro1|scaffold_174 (34199-34388) | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
               |  | 271-441, gnl|bosTau2|chr9 (23324251-23324421) | 
               |  | 271-441, gnl|canFam2|chr12 (69601010-69601199) | 
               |  | 271-441, gnl|danRer3|chr13 (46559753-46559935) | 
               |  | 271-441, gnl|dasNov1|scaffold_24914 (46430-46619) | 
               |  | 271-441, gnl|echTel1|scaffold_28228 (6265-6073) | 
               |  | 271-441, gnl|fr1|chrUn (22978007-22978194) | 
               |  | 271-441, gnl|galGal2|chr3 (65224188-65223999) | 
               |  | 271-441, gnl|hg17|chr6 (110194611-110194800) | 
               |  | 271-441, gnl|Hg17|chr6 (110194621-110194791) | 
               |  | 271-441, gnl|loxAfr1|scaffold_23095 (19718-19534) | 
               |  | 271-441, gnl|mm7|chr10 (41067944-41067755) | 
               |  | 271-441, gnl|Mm7|chr10 (41067932-41067762) | 
               |  | 271-441, gnl|monDom2|scaffold_0 (110478898-110478709) | 
               |  | 271-441, gnl|panTro1|chr5 (112509103-112509292) | 
               |  | 271-441, gnl|rheMac2|chr4 (154169423-154169234) | 
               |  | 271-441, gnl|rn3|chr20 (45210758-45210569) | 
               |  | 271-441, gnl|tetNig1|chr14 (2698819-2699003) | 
               |  | 271-441, gnl|xenTro1|scaffold_174 (34199-34388) | 
               |  | tes (0.415628) | 
               |  | ton (0.1755) | 
               |  | fbs (0.175346) | 
               |  | tes (0.415628) | 
               |  | ton (0.1755) | 
               |  | fbs (0.175346) |