Ss1.1-Tra1-TCH01E030045.5
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TGTCCCAAAGCAGTTGGATGGGAAAAGAACCAGAAAGGCGGCATGGGGCCCCGGATGGTG
AACCTCAGCGAATGTATGGACCCTAAGAGGTTAGCTGAGTCATCCGTGGACCTCAATCTC
AAGTTGATGTGTTGGAGATTGGTCCCTACTTTGGACTTAGACAAGGTTGTGTCTGTCAAG
TGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGTAACGTAGCTAGGACGTTGATGGGTTGG
GGCGTCAGACACATCACATTTGTGGACAATGCCAAGATCTCCTATTCCAACCCTGTGAGG
CAGCCGCTGTATGAATTTGAAGATTGCCTGGTGGGTGGTAAGCCCAAGGCCCTGGCAGCA
GCAGACCGCCTCCAGAAAATATTCCCCGGAGTGAATGCCAGAGGGTTCAACATGAGCATC
CCCATGCCGGGACACCCTGTCAACTCCTCCAGCATCACCCTGGAGCAGGCCCGCAGGGAT
GTGGAGCAGCTGGAGCAGCTCATCGAAAGCCATGACGTCGTGTTCCTGTTGATGGACACC
AGGGAGAGTCGGTGGCTGCCTGCTGTCATCGCTGCCAGCAAGAGAAAGCTGGTCATCAAT
GCTGCGTTGGGATTTGACACGTTTGTTGTCATGAGACATGGCCTGAAGAAACCTAAGCAG
CAGGGAGCTGGGGACCTGTGTCCCAGCAACCCTGTGACATCTGCTGACCTCCTGGGCTCA
TCACTTTTTGCCAACATCCCTGGCTACAAACTTGGCTGCTATTTCTGCAATGATGTCGTG
GCCCCAGGAGATTCCACCAGAGACCGGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCA
GGACTGGCCATGATTGCAGGAGCCCTGGCAGTGGAATTGATGGTTTCTGTTTTGCAGCAT
CCGGAAGGGGGCTACGCCATTGCCAGCAGCAGCGACGACCGCATGAATGAGCCTCCGACC
TCCCTCGGGCTCGTGCCTCACCAGATCCGAGGATTTCTGTCACGATTTGATAATGTCCTT
CCTGTCAGCCTGGCATTTGACAAATGTACAGCTTGTTCTTCCAAAGTTCTTGATCAATAT
GAACGGGAAGGATTTAATTTCCTAGCAAAGGTGTTTAATTCTTCACATTCCTTCTTGGAG
GACTTGACTGGTCTTACCTTGCTGCATCAAGAGACCCAGGCTGCTGAGATCTGGGACATG
AGCGACGATGAGACCGTCTGACAACACCCCCCGAGAGGCTGACCCCTCCCTGGCTGCCCC
ACAGGGCTCTCAGTGGCTGGAGCAGGACGGCCGCCCCCAGGACTGGTGATTATGGGCCCC
AAGCCCCTCCAACCTTTCTGGTCCCCTCGTCCCTATACCTTGAGGACTGGGGTCCTTCTT
CCGCTGCCCAGGAGCTTCTGGTGTTCTCCATTTCTTATGATTCACAATCCCACCAGTACT
GAGCTAAATAATAACCTTGGCTTTGGCATTGCCATTGATCTGGGACTC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TGTCCCAAAGCAGTTGGATGGGAAAAGAACCAGAAAGGCGGCATGGGGCCCCGGATGGTG
AACCTCAGCGAATGTATGGACCCTAAGAGGTTAGCTGAGTCATCCGTGGACCTCAATCTC
AAGTTGATGTGTTGGAGATTGGTCCCTACTTTGGACTTAGACAAGGTTGTGTCTGTCAAG
TGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGTAACGTAGCTAGGACGTTGATGGGTTGG
GGCGTCAGACACATCACATTTGTGGACAATGCCAAGATCTCCTATTCCAACCCTGTGAGG
CAGCCGCTGTATGAATTTGAAGATTGCCTGGTGGGTGGTAAGCCCAAGGCCCTGGCAGCA
GCAGACCGCCTCCAGAAAATATTCCCCGGAGTGAATGCCAGAGGGTTCAACATGAGCATC
CCCATGCCGGGACACCCTGTCAACTCCTCCAGCATCACCCTGGAGCAGGCCCGCAGGGAT
GTGGAGCAGCTGGAGCAGCTCATCGAAAGCCATGACGTCGTGTTCCTGTTGATGGACACC
AGGGAGAGTCGGTGGCTGCCTGCTGTCATCGCTGCCAGCAAGAGAAAGCTGGTCATCAAT
GCTGCGTTGGGATTTGACACGTTTGTTGTCATGAGACATGGCCTGAAGAAACCTAAGCAG
CAGGGAGCTGGGGACCTGTGTCCCAGCAACCCTGTGACATCTGCTGACCTCCTGGGCTCA
TCACTTTTTGCCAACATCCCTGGCTACAAACTTGGCTGCTATTTCTGCAATGATGTCGTG
GCCCCAGGAGATTCCACCAGAGACCGGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCA
GGACTGGCCATGATTGCAGGAGCCCTGGCAGTGGAATTGATGGTTTCTGTTTTGCAGCAT
CCGGAAGGGGGCTACGCCATTGCCAGCAGCAGCGACGACCGCATGAATGAGCCTCCGACC
TCCCTCGGGCTCGTGCCTCACCAGATCCGAGGATTTCTGTCACGATTTGATAATGTCCTT
CCTGTCAGCCTGGCATTTGACAAATGTACAGCTTGTTCTTCCAAAGTTCTTGATCAATAT
GAACGGGAAGGATTTAATTTCCTAGCAAAGGTGTTTAATTCTTCACATTCCTTCTTGGAG
GACTTGACTGGTCTTACCTTGCTGCATCAAGAGACCCAGGCTGCTGAGATCTGGGACATG
AGCGACGATGAGACCGTCTGACAACACCCCCCGAGAGGCTGACCCCTCCCTGGCTGCCCC
ACAGGGCTCTCAGTGGCTGGAGCAGGACGGCCGCCCCCAGGACTGGTGATTATGGGCCCC
AAGCCCCTCCAACCTTTCTGGTCCCCTCGTCCCTATACCTTGAGGACTGGGGTCCTTCTT
CCGCTGCCCAGGAGCTTCTGGTGTTCTCCATTTCTTATGATTCACAATCCCACCAGTACT
GAGCTAAATAATAACCTTGGCTTTGGCATTGCCATTGATCTGGGACTC
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gi|6102876|emb|CAB59250.1| |
Protein identifier
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gi|6102876|emb|CAB59250.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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1057-1188, gnl|bosTau2|chr22 (41860016-41860147) |
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1057-1188, gnl|canFam2|chr20 (10042548-10042380) |
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1057-1188, gnl|danRer3|chrNA (49418676-49418831) |
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1057-1188, gnl|dasNov1|scaffold_4459 (65488-65319) |
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1057-1188, gnl|echTel1|scaffold_322362 (61780-61954) |
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1057-1188, gnl|fr1|chrUn (31642890-31642729) |
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1057-1188, gnl|galGal2|chr12 (4476013-4476181) |
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1057-1188, gnl|hg17|chr3 (11443265-11443433) |
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1057-1188, gnl|Hg17|chr3 (11443270-11443400) |
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1057-1188, gnl|loxAfr1|scaffold_5207 (21350-21518) |
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1057-1188, gnl|mm7|chr6 (114802558-114802723) |
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1057-1188, gnl|Mm7|chr6 (114802563-114802693) |
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1057-1188, gnl|monDom2|scaffold_5 (38796739-38796904) |
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1057-1188, gnl|oryCun1|scaffold_207959 (228542-228374) |
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1057-1188, gnl|panTro1|chr2 (11851627-11851795) |
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1057-1188, gnl|rheMac2|chr2 (49606084-49605916) |
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1057-1188, gnl|rn3|chr4 (151153287-151153449) |
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1057-1188, gnl|tetNig1|chrUn_random (167972725-167972863) |
| |
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1338-1487, gnl|bosTau2|chr22 (45117768-45117912) |
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1338-1487, gnl|Hg17|chr3 (11571411-11571559) |
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1338-1487, gnl|Mm7|chr6 (114884702-114884847) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1057-1188, gnl|bosTau2|chr22 (41860016-41860147) |
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1057-1188, gnl|canFam2|chr20 (10042548-10042380) |
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1057-1188, gnl|danRer3|chrNA (49418676-49418831) |
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1057-1188, gnl|dasNov1|scaffold_4459 (65488-65319) |
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1057-1188, gnl|echTel1|scaffold_322362 (61780-61954) |
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1057-1188, gnl|fr1|chrUn (31642890-31642729) |
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1057-1188, gnl|galGal2|chr12 (4476013-4476181) |
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1057-1188, gnl|hg17|chr3 (11443265-11443433) |
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1057-1188, gnl|Hg17|chr3 (11443270-11443400) |
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1057-1188, gnl|loxAfr1|scaffold_5207 (21350-21518) |
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1057-1188, gnl|mm7|chr6 (114802558-114802723) |
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1057-1188, gnl|Mm7|chr6 (114802563-114802693) |
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1057-1188, gnl|monDom2|scaffold_5 (38796739-38796904) |
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1057-1188, gnl|oryCun1|scaffold_207959 (228542-228374) |
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1057-1188, gnl|panTro1|chr2 (11851627-11851795) |
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1057-1188, gnl|rheMac2|chr2 (49606084-49605916) |
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1057-1188, gnl|rn3|chr4 (151153287-151153449) |
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1057-1188, gnl|tetNig1|chrUn_random (167972725-167972863) |
| |
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1338-1487, gnl|bosTau2|chr22 (45117768-45117912) |
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1338-1487, gnl|Hg17|chr3 (11571411-11571559) |
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1338-1487, gnl|Mm7|chr6 (114884702-114884847) |
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pla (0.267344) |
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hlv (0.139256) |
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eep (0.122564) |
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cly (0.120642) |
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pla (0.267344) |
|
hlv (0.139256) |
|
eep (0.122564) |
|
cly (0.120642) |
