Non-Coding RNA Search

Ss1.1-Tra1-TCH01E040098.5

Sequence:


               
               CCCACATTCAGGAAGTTTTTGGCTATTATCTCTTCAAATATATCCTCAGGCTTATTCTCT
CTTCTCTTTCTGGGACCCCTATAGTGTGAATGCTAGTATGTTTAATGTTGTCCCAGAGGT
CTCTTCGACTGTCCTCATTTCTTTTTTTGTTCTTTTTTCTTTATCCTATTCTGTGGCAGT
GATTTCCACCAGTCTGTCTTTAAGCTCACTTTTTTGCTCTTCTACTTCATTTATTCTGCT
ATTGATTCCTTCCAGTGTATTTTTCATTTCAACTATTGTATTGTTCAGCTCACTTTGTTT
GTTCTTTAAATCTTATAGCTCTTTGTAAAACATTTCTTGTATCTTCTTGGTCTGTGCCTC
CATTCTTTTTCCAAGATCTTGGATCATCTTTACTGTCATTATTCTGAATTCATTGTCAAA
TAGATTCCCTATCTCTGTTTCACTTAGGTGTTCTTTTTGGGGTTTTGTTCCTTCACCTGG
AACATATTTCTCTACCATCTCATATCATCTAACTTTTTGTGTCTGTTATCTTTGTTCTGT
GGGCTGCAGGATTGTAGTTCTTCTTCTGGTATCTGCCCTCTGGTGAGGTTGGTCCAGGGG
CTTCTTCAGGCTTCCTGGTGGGAGGGACTGGTGCCTGCCCACTAGTGGGTAGAGCTGGAT
CTTGTCCCTCTCGTGGGTAGGGTCATGTCAAGGGGTGTGTTTAGGGGCAGCTCTGGGCTT
AGAACAACTTTAGGCAGCTTGTCTGCTGATGGGGGACTGTGTTTCCACCCCGTTGGTGAT
TGGGCCTGAGGCATCCCAGCCCTGGAGCCTGCAGGCTGTTGGGTGGGGCCAGGTCTTTGT
TCCAAAATGATGACCTCCGGGTGAGCTCATGCTGATGAATATTCACTGGGGCCTCTGTTA
CCCAGTGTTCTTGCCCCCACAGCAAACCACAGCTAACCCAAACTTCCCCTGGAGGCCCTC
TAAGACCCACAGGTAGGTTTGGCCCAGGCTCCTAGGGAGTCACTTCTTTGCCTTGAGTCC
CATGTGAAACCTTGTTTAGGCCCTCCAAGAGTGAGGTCTCTGTTTCCCTCAGTCCTGTGG
AGTTCCTGTATTCAGGCCCTGTTGACCTTCAGACCCAAGTGCTTTGGGGGTTCCTCCTCC
CAATGCTGGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCACATTCAGGAAGTTTTTGGCTATTATCTCTTCAAATATATCCTCAGGCTTATTCTCT
CTTCTCTTTCTGGGACCCCTATAGTGTGAATGCTAGTATGTTTAATGTTGTCCCAGAGGT
CTCTTCGACTGTCCTCATTTCTTTTTTTGTTCTTTTTTCTTTATCCTATTCTGTGGCAGT
GATTTCCACCAGTCTGTCTTTAAGCTCACTTTTTTGCTCTTCTACTTCATTTATTCTGCT
ATTGATTCCTTCCAGTGTATTTTTCATTTCAACTATTGTATTGTTCAGCTCACTTTGTTT
GTTCTTTAAATCTTATAGCTCTTTGTAAAACATTTCTTGTATCTTCTTGGTCTGTGCCTC
CATTCTTTTTCCAAGATCTTGGATCATCTTTACTGTCATTATTCTGAATTCATTGTCAAA
TAGATTCCCTATCTCTGTTTCACTTAGGTGTTCTTTTTGGGGTTTTGTTCCTTCACCTGG
AACATATTTCTCTACCATCTCATATCATCTAACTTTTTGTGTCTGTTATCTTTGTTCTGT
GGGCTGCAGGATTGTAGTTCTTCTTCTGGTATCTGCCCTCTGGTGAGGTTGGTCCAGGGG
CTTCTTCAGGCTTCCTGGTGGGAGGGACTGGTGCCTGCCCACTAGTGGGTAGAGCTGGAT
CTTGTCCCTCTCGTGGGTAGGGTCATGTCAAGGGGTGTGTTTAGGGGCAGCTCTGGGCTT
AGAACAACTTTAGGCAGCTTGTCTGCTGATGGGGGACTGTGTTTCCACCCCGTTGGTGAT
TGGGCCTGAGGCATCCCAGCCCTGGAGCCTGCAGGCTGTTGGGTGGGGCCAGGTCTTTGT
TCCAAAATGATGACCTCCGGGTGAGCTCATGCTGATGAATATTCACTGGGGCCTCTGTTA
CCCAGTGTTCTTGCCCCCACAGCAAACCACAGCTAACCCAAACTTCCCCTGGAGGCCCTC
TAAGACCCACAGGTAGGTTTGGCCCAGGCTCCTAGGGAGTCACTTCTTTGCCTTGAGTCC
CATGTGAAACCTTGTTTAGGCCCTCCAAGAGTGAGGTCTCTGTTTCCCTCAGTCCTGTGG
AGTTCCTGTATTCAGGCCCTGTTGACCTTCAGACCCAAGTGCTTTGGGGGTTCCTCCTCC
CAATGCTGGGCT

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-269, gnl|bosTau2|chr1 (45097610-45097359)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-269, gnl|bosTau2|chr1 (45097610-45097359)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)