Ss1.1-Tra1-TCH01E040101.5
|
AACATCCACTGAGCGGTCGGTTCCCCAGAACCTGCCCGTGACCATGGAGGCCAGGATGTT
CTGGCTGCTAGTGGTGCTCCTGGCCTTGGCGTCCTCCAGCTCTGCCGGGGAGTATGTGGG
CCTGTGTGAGTACCACTCTGTCTCCCCTACTTGGCAGCGGCGGGGAGGGGCCAGGGGCAA
GGCGGGGCCCATGGCAGGGGCCGCTGGGCTCCAGGGCTTCCTGTGGGCTTGAGGAGAGGG
ACCAAGCCCCATGTCCCTTTAACCACTACCATTTACCAGACACCCAGGATTTCTCTCAAC
AGCCTTGCAAACAGGGTCTTGCTGCTCCCATTTTACAGACAAGGAAACTGAGTCTCTGAA
AGTTAGTAACTGGCCCTCCCAGTCAGTGTTGAACTCAGGATTCAAGCCCAGGTCTGCCTT
CCTTGCTAGAGATTTCCGAATGACAGTACAGGTCTTTGCATAGTATTCTGGCGGAGTCAC
AAAACAAAACAGAAAGATCCATGACAATGAGTTCTGGAACATTTTCCATCTGGTCAAACC
TTTTTCTTTTAGCCATTGCGACTCGGGGCAAGGGCTGTGGTTGTTCCCGTCCCCTGAGTT
AGGGTGTGGCTTTTATCAGGTTACCTGCTGAGCCATCTCAAGCAGTGGCTCCCAAACGGG
GCATCTGTCAGCATCACCTGGAAACTTTGCCAACGCTTGAAGCTTGGGATGTGCCAGTCA
TATCAGAATGTCTCTGGGTGGGATCAGGTTTCCATGGAGTGAAAGACCCCAGGGCCAACA
GAGTTTGGGAACCAGTGGAATACGGAATTACAGACTGGCTGCAATAGAAGACGAGCTGAG
ATTTCGTGTGATTTCTATTTTCCTGAGGAAAAGCACAGACAGGCAATGAGGCCAAGCAGA
CTTTTGCTGAACTTTAGACAAAGACTTAGATGAATA------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------TCTAGACCGGCAGCTATAGCTCTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AACATCCACTGAGCGGTCGGTTCCCCAGAACCTGCCCGTGACCATGGAGGCCAGGATGTT
CTGGCTGCTAGTGGTGCTCCTGGCCTTGGCGTCCTCCAGCTCTGCCGGGGAGTATGTGGG
CCTGTGTGAGTACCACTCTGTCTCCCCTACTTGGCAGCGGCGGGGAGGGGCCAGGGGCAA
GGCGGGGCCCATGGCAGGGGCCGCTGGGCTCCAGGGCTTCCTGTGGGCTTGAGGAGAGGG
ACCAAGCCCCATGTCCCTTTAACCACTACCATTTACCAGACACCCAGGATTTCTCTCAAC
AGCCTTGCAAACAGGGTCTTGCTGCTCCCATTTTACAGACAAGGAAACTGAGTCTCTGAA
AGTTAGTAACTGGCCCTCCCAGTCAGTGTTGAACTCAGGATTCAAGCCCAGGTCTGCCTT
CCTTGCTAGAGATTTCCGAATGACAGTACAGGTCTTTGCATAGTATTCTGGCGGAGTCAC
AAAACAAAACAGAAAGATCCATGACAATGAGTTCTGGAACATTTTCCATCTGGTCAAACC
TTTTTCTTTTAGCCATTGCGACTCGGGGCAAGGGCTGTGGTTGTTCCCGTCCCCTGAGTT
AGGGTGTGGCTTTTATCAGGTTACCTGCTGAGCCATCTCAAGCAGTGGCTCCCAAACGGG
GCATCTGTCAGCATCACCTGGAAACTTTGCCAACGCTTGAAGCTTGGGATGTGCCAGTCA
TATCAGAATGTCTCTGGGTGGGATCAGGTTTCCATGGAGTGAAAGACCCCAGGGCCAACA
GAGTTTGGGAACCAGTGGAATACGGAATTACAGACTGGCTGCAATAGAAGACGAGCTGAG
ATTTCGTGTGATTTCTATTTTCCTGAGGAAAAGCACAGACAGGCAATGAGGCCAAGCAGA
CTTTTGCTGAACTTTAGACAAAGACTTAGATGAATA------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------TCTAGACCGGCAGCTATAGCTCTG
|
|
9-250, gnl|bosTau2|chr1 (92756869-92756606) |
|
9-250, gnl|Mm7|chr17 (29324822-29324600) |
| |
|
261-401, gnl|bosTau2|chr1 (92756244-92756103) |
|
261-401, gnl|canFam2|chr31 (38966984-38967406) |
|
261-401, gnl|dasNov1|scaffold_30043 (18072-17648) |
|
261-401, gnl|hg17|chr21 (42607962-42608379) |
|
261-401, gnl|Hg17|chr21 (42608378-42608234) |
|
261-401, gnl|loxAfr1|scaffold_65355 (4498-4084) |
|
261-401, gnl|mm7|chr17 (29324198-29324572) |
|
261-401, gnl|panTro1|chr22 (42729928-42730345) |
|
261-401, gnl|rheMac2|chr3 (4352948-4352532) |
|
261-401, gnl|rn3|chr20 (9474222-9474603) |
| |
|
414-934, gnl|bosTau2|chr1 (92756066-92755552) |
|
414-934, gnl|Hg17|chr21 (42608203-42607346) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
9-250, gnl|bosTau2|chr1 (92756869-92756606) |
|
9-250, gnl|Mm7|chr17 (29324822-29324600) |
| |
|
261-401, gnl|bosTau2|chr1 (92756244-92756103) |
|
261-401, gnl|canFam2|chr31 (38966984-38967406) |
|
261-401, gnl|dasNov1|scaffold_30043 (18072-17648) |
|
261-401, gnl|hg17|chr21 (42607962-42608379) |
|
261-401, gnl|Hg17|chr21 (42608378-42608234) |
|
261-401, gnl|loxAfr1|scaffold_65355 (4498-4084) |
|
261-401, gnl|mm7|chr17 (29324198-29324572) |
|
261-401, gnl|panTro1|chr22 (42729928-42730345) |
|
261-401, gnl|rheMac2|chr3 (4352948-4352532) |
|
261-401, gnl|rn3|chr20 (9474222-9474603) |
| |
|
414-934, gnl|bosTau2|chr1 (92756066-92755552) |
|
414-934, gnl|Hg17|chr21 (42608203-42607346) |
