Non-Coding RNA Search

Ss1.1-Tra1-TCH01E090036.5

Sequence:


               
               CTGAGAGTTGCTGCTGAAAGGAGGTGGCGAAGGAGGAGCCGGAGCAGCTGCTGCCAGCCG
GCGGGCACCAGAGTCCTGCCCGCTGCCGCAAGAGTAGCCACGGGCGCGATCGGGGCCAGA
CGTCTTCTCCTCCATGATCACTCTGGGAGCCGGGGGAAGACTTTGCCCGGCCGTGAGAGC
TGGTCTGCGTTTCCCAGGCGCGGCGGCGGCGGAGCAGCGAAAGCAGCCGGGTCCGAATCC
GAGTGGCCACAGCCCGGGGCGTGTGCGCCCCGCTTGGAGCGTGCTCGGGTTCCCCACGGA
ATGTCCCCGGGGCGCCCGGCGCGCTGACCCCCTAGCCGCCTCCGCCTTCGGCGCCTGCTC
CCTCTCTCTGGCGGGCTCGTTGTTCAGGACTGCAAGCTTCCTAGCTCCCGAGCAGTGGGG
AAGCCCCCGGGGGCGGGTGACCTCAGCTGGCCACGACCCAGCCCTCCACCGTGCATATCT
CGCTTAAGATGGCAGCGGAGTCAGGGGAACTAATCGGGGCTTGCGAGTTCATGAAAGATC
GGTTATATTTTGCTACTTTAAGGAATAGACCAAAAAGTACAGTAAATACCCACTATTTCT
CCATCGATGAGGAGCTGGTCTATGAAAATTTCTATGCAGATTTTGGACCTCTGAACTTGG
CAATGGTGTACAGATACTGCTGTAAACTAAACAAGAAACTGAAACCAAAGAAAATTTTCA
GAAAGAAAATAGTGCACTACACCTGTTTTGACCAACAGAAAAGGGCAAATGCAGCATTTT
TGATAGGTGCTTATGCCGTAATCTATTTAAAGAAGACACCAGAAGAAGCCTACAGAGCAC
TCCTTTCTGGCTCAAACCCCCCCTATCTTCCATTCAGGGATGCTTCCTTTGGAAATTGCA
CTTACAATCTCACCATCCTCGACTGTTTGCAGGGAATCAGAAAGGGATTACAACATGGAT
TTTTTGACTTTGAGACATTTGATGTGGATGAATATGAACATTATGAGCGAGTTGAAAATG
GTGACTTCAACTGGATTGTTCCAGGAAAATTTTTAGCATTTAGTGGACCACATCCAAAAA
GCAAAATTGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGAGAGTTGCTGCTGAAAGGAGGTGGCGAAGGAGGAGCCGGAGCAGCTGCTGCCAGCCG
GCGGGCACCAGAGTCCTGCCCGCTGCCGCAAGAGTAGCCACGGGCGCGATCGGGGCCAGA
CGTCTTCTCCTCCATGATCACTCTGGGAGCCGGGGGAAGACTTTGCCCGGCCGTGAGAGC
TGGTCTGCGTTTCCCAGGCGCGGCGGCGGCGGAGCAGCGAAAGCAGCCGGGTCCGAATCC
GAGTGGCCACAGCCCGGGGCGTGTGCGCCCCGCTTGGAGCGTGCTCGGGTTCCCCACGGA
ATGTCCCCGGGGCGCCCGGCGCGCTGACCCCCTAGCCGCCTCCGCCTTCGGCGCCTGCTC
CCTCTCTCTGGCGGGCTCGTTGTTCAGGACTGCAAGCTTCCTAGCTCCCGAGCAGTGGGG
AAGCCCCCGGGGGCGGGTGACCTCAGCTGGCCACGACCCAGCCCTCCACCGTGCATATCT
CGCTTAAGATGGCAGCGGAGTCAGGGGAACTAATCGGGGCTTGCGAGTTCATGAAAGATC
GGTTATATTTTGCTACTTTAAGGAATAGACCAAAAAGTACAGTAAATACCCACTATTTCT
CCATCGATGAGGAGCTGGTCTATGAAAATTTCTATGCAGATTTTGGACCTCTGAACTTGG
CAATGGTGTACAGATACTGCTGTAAACTAAACAAGAAACTGAAACCAAAGAAAATTTTCA
GAAAGAAAATAGTGCACTACACCTGTTTTGACCAACAGAAAAGGGCAAATGCAGCATTTT
TGATAGGTGCTTATGCCGTAATCTATTTAAAGAAGACACCAGAAGAAGCCTACAGAGCAC
TCCTTTCTGGCTCAAACCCCCCCTATCTTCCATTCAGGGATGCTTCCTTTGGAAATTGCA
CTTACAATCTCACCATCCTCGACTGTTTGCAGGGAATCAGAAAGGGATTACAACATGGAT
TTTTTGACTTTGAGACATTTGATGTGGATGAATATGAACATTATGAGCGAGTTGAAAATG
GTGACTTCAACTGGATTGTTCCAGGAAAATTTTTAGCATTTAGTGGACCACATCCAAAAA
GCAAAATTGAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|24659438|gb|AAH38979.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|24659438|gb|AAH38979.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-537, gnl|bosTau2|chr3 (39056796-39056263)
               

               
               4-537, gnl|Hg17|chr1 (100530044-100530580)
               

               
               4-537, gnl|Mm7|chr3 (116197459-116196882)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-537, gnl|bosTau2|chr3 (39056796-39056263)
               

               
               4-537, gnl|Hg17|chr1 (100530044-100530580)
               

               
               4-537, gnl|Mm7|chr3 (116197459-116196882)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.135208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)

	4-537, gnl\|bosTau2\|chr3 (39056796-39056263)
	4-537, gnl\|Hg17\|chr1 (100530044-100530580)
	4-537, gnl\|Mm7\|chr3 (116197459-116196882)