Ss1.1-Tra1-TCH01E120098.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATTGCAGCGCTCAGATCTCCGTCGCATCGGCTTCCAGGAGCGGGCAGCGGGCGCCGACG GGAGTGGCAGTCCCTCCCGCCGGGGGAGTGGGCCGGGCAGCCGCGCGCTCAGCATCCTCC TGCACCTTCCGTCGCCATGGGCGGCTCGGCCTCCAGCCAGTTGGACGAGGGCAAGTGCGC CTACATCCGAGGGAAAACTGAGGCTGTTATCAAAAACTTCAGTCCCTACTACAGTCGCCA GTACTCCGTGGCTTTCTGCAATCACGTACGCAGTGAAGTAGAACAGCAAAGAGATTCAAC ATCGCAATTTTTGAAGACCAAGCCACCACTGGAGCCTGGAACTATTTTGTATGAAGCAGA ACTATCGCAGTTTGCTGAGGACATAAAGAAATGGAAGGAGAGATATGTCGTGGTTAAAAA TGATTTTGCTGTGGAAAGCTATGAGAACAAAGAGGCCTATCAGAAAGGAGCTCCCCCTAA ATGTCGAATTCTTCCAGCTGGTGCCAAGGTGTTAACCTCAGAAGATGAATACAATTTATT ATCTGACCGGCATTTCCCAGACCCTATTGCAACCAGTGAGAAAGAGAACACGCAGCCCTT TGTGGCTCTGCCCAAGGAATTCCCGGTGTACCTGTGGCAACCATTCCTCAGACACAGCTA CTTCTGCTTCCAGGAGGCTGCCGAGCAGAAGAAGTTCAGTGCTCTCCTGACGGACTGCAT CAGACACCTAAATCATGATTACACGAAGCAGATGACGTTTGAAGCCCAAGCCTTTTTAGA AGCTGTGCAGTTCTTCCGACAAGAGAAAGGACACTATGGCTCATGGGAGATGACCACTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATTGCAGCGCTCAGATCTCCGTCGCATCGGCTTCCAGGAGCGGGCAGCGGGCGCCGACG GGAGTGGCAGTCCCTCCCGCCGGGGGAGTGGGCCGGGCAGCCGCGCGCTCAGCATCCTCC TGCACCTTCCGTCGCCATGGGCGGCTCGGCCTCCAGCCAGTTGGACGAGGGCAAGTGCGC CTACATCCGAGGGAAAACTGAGGCTGTTATCAAAAACTTCAGTCCCTACTACAGTCGCCA GTACTCCGTGGCTTTCTGCAATCACGTACGCAGTGAAGTAGAACAGCAAAGAGATTCAAC ATCGCAATTTTTGAAGACCAAGCCACCACTGGAGCCTGGAACTATTTTGTATGAAGCAGA ACTATCGCAGTTTGCTGAGGACATAAAGAAATGGAAGGAGAGATATGTCGTGGTTAAAAA TGATTTTGCTGTGGAAAGCTATGAGAACAAAGAGGCCTATCAGAAAGGAGCTCCCCCTAA ATGTCGAATTCTTCCAGCTGGTGCCAAGGTGTTAACCTCAGAAGATGAATACAATTTATT ATCTGACCGGCATTTCCCAGACCCTATTGCAACCAGTGAGAAAGAGAACACGCAGCCCTT TGTGGCTCTGCCCAAGGAATTCCCGGTGTACCTGTGGCAACCATTCCTCAGACACAGCTA CTTCTGCTTCCAGGAGGCTGCCGAGCAGAAGAAGTTCAGTGCTCTCCTGACGGACTGCAT CAGACACCTAAATCATGATTACACGAAGCAGATGACGTTTGAAGCCCAAGCCTTTTTAGA AGCTGTGCAGTTCTTCCGACAAGAGAAAGGACACTATGGCTCATGGGAGATGACCACTGG |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 190-322, gnl|bosTau2|chr16 (48490207-48490075) | |
| 190-322, gnl|canFam2|chr7 (21072117-21072287) | |
| 190-322, gnl|dasNov1|scaffold_1435 (49555-49382) | |
| 190-322, gnl|echTel1|scaffold_308759 (203667-203843) | |
| 190-322, gnl|hg17|chr1 (181599960-181600132) | |
| 190-322, gnl|Hg17|chr1 (181600101-181599969) | |
| 190-322, gnl|loxAfr1|scaffold_1170 (36520-36344) | |
| 190-322, gnl|mm7|chr1 (151570422-151570250) | |
| 190-322, gnl|Mm7|chr1 (151570279-151570411) | |
| 190-322, gnl|monDom2|scaffold_16 (39127498-39127685) | |
| 190-322, gnl|oryCun1|scaffold_122457 (11402-11240) | |
| 190-322, gnl|panTro1|chr1 (164164985-164165157) | |
| 190-322, gnl|rheMac2|chr1 (185783248-185783076) | |
| 190-322, gnl|rn3|chr13 (66549357-66549185) | |
| 569-737, gnl|bosTau2|chr16 (48471806-48471638) | |
| 569-737, gnl|canFam2|chr7 (21059550-21059799) | |
| 569-737, gnl|echTel1|scaffold_308759 (189589-189810) | |
| 569-737, gnl|hg17|chr1 (181585399-181585648) | |
| 569-737, gnl|Hg17|chr1 (181585592-181585424) | |
| 569-737, gnl|loxAfr1|scaffold_81691 (345-105) | |
| 569-737, gnl|mm7|chr1 (151583344-151583102) | |
| 569-737, gnl|Mm7|chr1 (151583155-151583320) | |
| 569-737, gnl|monDom2|scaffold_16 (39109676-39109893) | |
| 569-737, gnl|panTro1|chr1 (164150436-164150685) | |
| 569-737, gnl|rheMac2|chr1 (185797969-185797720) | |
| 569-737, gnl|rn3|chr13 (66563652-66563401) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 190-322, gnl|bosTau2|chr16 (48490207-48490075) | |
| 190-322, gnl|canFam2|chr7 (21072117-21072287) | |
| 190-322, gnl|dasNov1|scaffold_1435 (49555-49382) | |
| 190-322, gnl|echTel1|scaffold_308759 (203667-203843) | |
| 190-322, gnl|hg17|chr1 (181599960-181600132) | |
| 190-322, gnl|Hg17|chr1 (181600101-181599969) | |
| 190-322, gnl|loxAfr1|scaffold_1170 (36520-36344) | |
| 190-322, gnl|mm7|chr1 (151570422-151570250) | |
| 190-322, gnl|Mm7|chr1 (151570279-151570411) | |
| 190-322, gnl|monDom2|scaffold_16 (39127498-39127685) | |
| 190-322, gnl|oryCun1|scaffold_122457 (11402-11240) | |
| 190-322, gnl|panTro1|chr1 (164164985-164165157) | |
| 190-322, gnl|rheMac2|chr1 (185783248-185783076) | |
| 190-322, gnl|rn3|chr13 (66549357-66549185) | |
| 569-737, gnl|bosTau2|chr16 (48471806-48471638) | |
| 569-737, gnl|canFam2|chr7 (21059550-21059799) | |
| 569-737, gnl|echTel1|scaffold_308759 (189589-189810) | |
| 569-737, gnl|hg17|chr1 (181585399-181585648) | |
| 569-737, gnl|Hg17|chr1 (181585592-181585424) | |
| 569-737, gnl|loxAfr1|scaffold_81691 (345-105) | |
| 569-737, gnl|mm7|chr1 (151583344-151583102) | |
| 569-737, gnl|Mm7|chr1 (151583155-151583320) | |
| 569-737, gnl|monDom2|scaffold_16 (39109676-39109893) | |
| 569-737, gnl|panTro1|chr1 (164150436-164150685) | |
| 569-737, gnl|rheMac2|chr1 (185797969-185797720) | |
| 569-737, gnl|rn3|chr13 (66563652-66563401) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) | |
| eep (0.122564) | |
| cbl (0.114797) |