Non-Coding RNA Search

Ss1.1-Tra1-TCH01F010085.5

Sequence:


               
               TGGACATGACGGCCGGCGGCCAGGCGGAGGGCTCGGGCGCTGATCCCGGCTCCGTGGGGC
TGCCTTCCCGGGCGGCCAAGCTGCTGTCCGCGCTCTTCTATGGGACCTGCTCCTTCCTCC
TCGTGCTGGTCAACAAGGCGCTGCTGACCACCTACCGTTTCCCATCGCCAATTGTTCTTG
GAATTGGACAGATGGCAGTTACCATAATGATACTGTATGTGTCCAAGCTAAATAAAATAA
TTCACTTCCCTGATTTTGACAAGAAAATTCCTATAAAGCTGTTTCCTCTGCCTCTTCTCT
ACATCGGAAACCACATAAGCGGATTATGGAGCACAAGTAAATTAAGCTTACCGATGTTCA
CCGTACTCAGGAAATTTACCATTCCACTTACTTTACTCCTGGAAACCATCATACTTGGGA
AGCAGTATTCCTTGAACATCATTGTCAGTGTCTTTGGGAAATACGGAGTGCTTTTCTACA
ATGCTTGCTTCATGATAATCCCAACTCTTATCCTTAGTATCTCTACTGGAGACCTTCGAC
AGGCCACTGAATTCAACCAATGGAAGAATGTTCTATTTATCATACAGTTTCTTCTTTCCT
GCTTTTTGGGGTTTCTGTTGATGTACTCCACAGTTTTGTGCAGCTATTACAATTCAGCCC
TGACCACGGCGGTAGTTGGAGCCATCAAGAATGTGTCCATTGCCTACATTGGGATGTTAG
TTGGTGGAGACTACATTTTCTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGACATGACGGCCGGCGGCCAGGCGGAGGGCTCGGGCGCTGATCCCGGCTCCGTGGGGC
TGCCTTCCCGGGCGGCCAAGCTGCTGTCCGCGCTCTTCTATGGGACCTGCTCCTTCCTCC
TCGTGCTGGTCAACAAGGCGCTGCTGACCACCTACCGTTTCCCATCGCCAATTGTTCTTG
GAATTGGACAGATGGCAGTTACCATAATGATACTGTATGTGTCCAAGCTAAATAAAATAA
TTCACTTCCCTGATTTTGACAAGAAAATTCCTATAAAGCTGTTTCCTCTGCCTCTTCTCT
ACATCGGAAACCACATAAGCGGATTATGGAGCACAAGTAAATTAAGCTTACCGATGTTCA
CCGTACTCAGGAAATTTACCATTCCACTTACTTTACTCCTGGAAACCATCATACTTGGGA
AGCAGTATTCCTTGAACATCATTGTCAGTGTCTTTGGGAAATACGGAGTGCTTTTCTACA
ATGCTTGCTTCATGATAATCCCAACTCTTATCCTTAGTATCTCTACTGGAGACCTTCGAC
AGGCCACTGAATTCAACCAATGGAAGAATGTTCTATTTATCATACAGTTTCTTCTTTCCT
GCTTTTTGGGGTTTCTGTTGATGTACTCCACAGTTTTGTGCAGCTATTACAATTCAGCCC
TGACCACGGCGGTAGTTGGAGCCATCAAGAATGTGTCCATTGCCTACATTGGGATGTTAG
TTGGTGGAGACTACATTTTCTCTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5VZJ2_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5VZJ2_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-157, gnl|bosTau2|chr8 (45543439-45543600)
               

               
               2-157, gnl|Hg17|chr9 (96225475-96225314)
               

               
               2-157, gnl|Mm7|chr13 (61952613-61952480)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-157, gnl|bosTau2|chr8 (45543439-45543600)
               

               
               2-157, gnl|Hg17|chr9 (96225475-96225314)
               

               
               2-157, gnl|Mm7|chr13 (61952613-61952480)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eli (0.151814)
               

               
               cly (0.120642)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eli (0.151814)
               

               
               cly (0.120642)

	2-157, gnl\|bosTau2\|chr8 (45543439-45543600)
	2-157, gnl\|Hg17\|chr9 (96225475-96225314)
	2-157, gnl\|Mm7\|chr13 (61952613-61952480)