Ss1.1-Tra1-TCH01F060039.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGGGAAGGGCCGGAGGAGCGGCGGCTGGCAGCCGAGAGGGGCGGCGGCGGAGGCGGCGG CGGGATTCCCGCGCCGCTGAGCCCGGCCCGAGAGCCCTTTCCACCTTCCTGCCTCCTGCT CCCGCCGCCCCGGGGTGCCGCCATGACGCCCGATCTGCTCAACTTCAAGAAGGGATGGAT GTCGATCTTGGACGAGCCTGGAGAGTGGAAGAAGCACTGGTTTGTGCTGACTGATTCAAG CCTCAAGTACTACAGGGATTCCACTGCTGAGGAGGCGGATGAGCTGGATGGCGAGATCGA CCTGCGCTCTTGCACCGATGTCACTGAGTTCGCCGTGCAGCGCAACTATGGCTTCCAGAT CCACACCAAAGACGCTGTCTATACCCTGTCGGCCATGACCTCGGGCATCCGGAGGAACTG GATCGAGGCTCTGAGGAAGACTGTGCGTCCAACCTCAGCCCCAGATGTAGGGCCACAGAG ACACCGGCCGGCGAGGGTCCACGCCGGGGCCTGGGCGCCCCCCTGACTGAGGACCAGCAG AACCGGCTGAGTGAGGAGATCGAGAAGAAGTGGCAGGAGCTGGAGAAGCTGCCCCTGCGG GAGAATAAGCGGGTGCCTCTCACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGGGAAGGGCCGGAGGAGCGGCGGCTGGCAGCCGAGAGGGGCGGCGGCGGAGGCGGCGG CGGGATTCCCGCGCCGCTGAGCCCGGCCCGAGAGCCCTTTCCACCTTCCTGCCTCCTGCT CCCGCCGCCCCGGGGTGCCGCCATGACGCCCGATCTGCTCAACTTCAAGAAGGGATGGAT GTCGATCTTGGACGAGCCTGGAGAGTGGAAGAAGCACTGGTTTGTGCTGACTGATTCAAG CCTCAAGTACTACAGGGATTCCACTGCTGAGGAGGCGGATGAGCTGGATGGCGAGATCGA CCTGCGCTCTTGCACCGATGTCACTGAGTTCGCCGTGCAGCGCAACTATGGCTTCCAGAT CCACACCAAAGACGCTGTCTATACCCTGTCGGCCATGACCTCGGGCATCCGGAGGAACTG GATCGAGGCTCTGAGGAAGACTGTGCGTCCAACCTCAGCCCCAGATGTAGGGCCACAGAG ACACCGGCCGGCGAGGGTCCACGCCGGGGCCTGGGCGCCCCCCTGACTGAGGACCAGCAG AACCGGCTGAGTGAGGAGATCGAGAAGAAGTGGCAGGAGCTGGAGAAGCTGCCCCTGCGG GAGAATAAGCGGGTGCCTCTCACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 1-148, gnl|bosTau2|chr5 (67235728-67235586) | |
| 1-148, gnl|hg17|chr22 (36466771-36466901) | |
| 1-148, gnl|Hg17|chr22 (36466780-36466927) | |
| 1-148, gnl|mm7|chr15 (79066040-79066137) | |
| 1-148, gnl|monDom2|scaffold_34 (52574-52504) | |
| 1-148, gnl|panTro1|chr23 (36644908-36645029) | |
| 1-148, gnl|rn3|chr7 (116980843-116980940) | |
| 337-468, gnl|bosTau2|chr5 (67227404-67227273) | |
| 337-468, gnl|Hg17|chr22 (36476029-36476160) | |
| 337-468, gnl|Mm7|chr15 (79074253-79074384) | |
| 470-624, gnl|bosTau2|chr5 (67225335-67225181) | |
| 470-624, gnl|canFam2|chr10 (29942248-29941963) | |
| 470-624, gnl|danRer3|chr12 (253200-253495) | |
| 470-624, gnl|dasNov1|scaffold_191134 (2759-2474) | |
| 470-624, gnl|echTel1|scaffold_305826 (5017-4723) | |
| 470-624, gnl|fr1|chrUn (78570508-78570269) | |
| 470-624, gnl|galGal2|chr1 (47839900-47839609) | |
| 470-624, gnl|hg17|chr22 (36478365-36478650) | |
| 470-624, gnl|Hg17|chr22 (36478419-36478573) | |
| 470-624, gnl|mm7|chr15 (79076104-79076389) | |
| 470-624, gnl|Mm7|chr15 (79076158-79076312) | |
| 470-624, gnl|monDom2|scaffold_34 (32857-32572) | |
| 470-624, gnl|panTro1|chr23 (36656472-36656757) | |
| 470-624, gnl|rheMac2|chr10 (81674577-81674862) | |
| 470-624, gnl|rn3|chr7 (116991322-116991607) | |
| 470-624, gnl|tetNig1|chrUn_random (38381293-38381523) | |
| 470-624, gnl|xenTro1|scaffold_246 (904377-904097) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-148, gnl|bosTau2|chr5 (67235728-67235586) | |
| 1-148, gnl|hg17|chr22 (36466771-36466901) | |
| 1-148, gnl|Hg17|chr22 (36466780-36466927) | |
| 1-148, gnl|mm7|chr15 (79066040-79066137) | |
| 1-148, gnl|monDom2|scaffold_34 (52574-52504) | |
| 1-148, gnl|panTro1|chr23 (36644908-36645029) | |
| 1-148, gnl|rn3|chr7 (116980843-116980940) | |
| 337-468, gnl|bosTau2|chr5 (67227404-67227273) | |
| 337-468, gnl|Hg17|chr22 (36476029-36476160) | |
| 337-468, gnl|Mm7|chr15 (79074253-79074384) | |
| 470-624, gnl|bosTau2|chr5 (67225335-67225181) | |
| 470-624, gnl|canFam2|chr10 (29942248-29941963) | |
| 470-624, gnl|danRer3|chr12 (253200-253495) | |
| 470-624, gnl|dasNov1|scaffold_191134 (2759-2474) | |
| 470-624, gnl|echTel1|scaffold_305826 (5017-4723) | |
| 470-624, gnl|fr1|chrUn (78570508-78570269) | |
| 470-624, gnl|galGal2|chr1 (47839900-47839609) | |
| 470-624, gnl|hg17|chr22 (36478365-36478650) | |
| 470-624, gnl|Hg17|chr22 (36478419-36478573) | |
| 470-624, gnl|mm7|chr15 (79076104-79076389) | |
| 470-624, gnl|Mm7|chr15 (79076158-79076312) | |
| 470-624, gnl|monDom2|scaffold_34 (32857-32572) | |
| 470-624, gnl|panTro1|chr23 (36656472-36656757) | |
| 470-624, gnl|rheMac2|chr10 (81674577-81674862) | |
| 470-624, gnl|rn3|chr7 (116991322-116991607) | |
| 470-624, gnl|tetNig1|chrUn_random (38381293-38381523) | |
| 470-624, gnl|xenTro1|scaffold_246 (904377-904097) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |