Ss1.1-Tra1-TCH01F060091.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAAGCAACAGGCAGCATGTCCTCTAAAGTTCAATCCAAAGGCTCCAAAGCCAAGGACCA CCAGCCTTCCGCCCAAGCGGGTCTGCCACCCCCTGAGGCCAATGCGGAAGCCATCCACTT CCTTGATTCCCTCCGGCAGGAGGAGCTGCTGATGCTGCTCTTCTCGGAGACCCTGGTCAT GGTGTCAGACACAGGGGAGCCTCAGGGAGAGCTGACCATTGATGTGCAGAGAGGGAAATA CAAGGATGAATTTGGTATCATGTCCTACTGCCCCTTCGTGCACGCCTCCAGCCGCGGCTA CGTGGACGGAGTCCTCTGCGGAACCTCGCTTCTGGGCTACCTTTCCTGGAAACTGGAGAT CGTGGAACAACATAACCAGGAGTTCATCAAGTTCCACACCCTCCCCATGGAACGGAAGAT GAGGTTGCTGAAGCAGGATGATCAGCTGGCCGTGACCAGAACTGTCAAGGAGGGTGAGGA AGTGAAGACTAAAGTGATCGTGTTCCCCTGGCACTCCATTGCGGGCTTCATCTCCGAGGC TGCCAACCTAGTGCTGCTGAGGGTGATGGGCTGGCGGCGGACAGTGCCCAGCAACGCCCG TTTCCTGGCCTTGGACACCGAGGGCAAACTCTGCTATTCCACTTATCAAGCCCTGGGCTC GCAGACCATCCAGGTGGGCCGGCAGCAGGTGGAAGTATTCATTGTGGAGCAGACTGTACA CTCAGAGGAGGGCATCCCCATGTCCTACCAGTTTTACCTGCTCTCTGATGGGCACCTGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAAGCAACAGGCAGCATGTCCTCTAAAGTTCAATCCAAAGGCTCCAAAGCCAAGGACCA CCAGCCTTCCGCCCAAGCGGGTCTGCCACCCCCTGAGGCCAATGCGGAAGCCATCCACTT CCTTGATTCCCTCCGGCAGGAGGAGCTGCTGATGCTGCTCTTCTCGGAGACCCTGGTCAT GGTGTCAGACACAGGGGAGCCTCAGGGAGAGCTGACCATTGATGTGCAGAGAGGGAAATA CAAGGATGAATTTGGTATCATGTCCTACTGCCCCTTCGTGCACGCCTCCAGCCGCGGCTA CGTGGACGGAGTCCTCTGCGGAACCTCGCTTCTGGGCTACCTTTCCTGGAAACTGGAGAT CGTGGAACAACATAACCAGGAGTTCATCAAGTTCCACACCCTCCCCATGGAACGGAAGAT GAGGTTGCTGAAGCAGGATGATCAGCTGGCCGTGACCAGAACTGTCAAGGAGGGTGAGGA AGTGAAGACTAAAGTGATCGTGTTCCCCTGGCACTCCATTGCGGGCTTCATCTCCGAGGC TGCCAACCTAGTGCTGCTGAGGGTGATGGGCTGGCGGCGGACAGTGCCCAGCAACGCCCG TTTCCTGGCCTTGGACACCGAGGGCAAACTCTGCTATTCCACTTATCAAGCCCTGGGCTC GCAGACCATCCAGGTGGGCCGGCAGCAGGTGGAAGTATTCATTGTGGAGCAGACTGTACA CTCAGAGGAGGGCATCCCCATGTCCTACCAGTTTTACCTGCTCTCTGATGGGCACCTGGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 135-348, gnl|bosTau2|chr2 (59706213-59706001) | |
| 135-348, gnl|canFam2|chr37 (28021705-28021933) | |
| 135-348, gnl|echTel1|scaffold_210124 (9427-9194) | |
| 135-348, gnl|galGal2|chrUn (136103992-136103768) | |
| 135-348, gnl|hg17|chr2 (219047713-219047942) | |
| 135-348, gnl|Hg17|chr2 (219047762-219047974) | |
| 135-348, gnl|loxAfr1|scaffold_63430 (8133-7904) | |
| 135-348, gnl|mm7|chr1 (74602376-74602600) | |
| 135-348, gnl|Mm7|chr1 (74602423-74602631) | |
| 135-348, gnl|monDom2|scaffold_39 (2269227-2269001) | |
| 135-348, gnl|oryCun1|scaffold_167871 (1082-1313) | |
| 135-348, gnl|panTro1|chr13 (109205119-109205348) | |
| 135-348, gnl|rheMac2|chr12 (82190260-82190489) | |
| 135-348, gnl|rn3|chr9 (73851034-73851256) | |
| 477-645, gnl|bosTau2|chr2 (59705244-59705076) | |
| 477-645, gnl|Hg17|chr2 (219052961-219053129) | |
| 477-645, gnl|Mm7|chr1 (74604220-74604388) | |
| 647-772, gnl|bosTau2|chr2 (59703461-59703336) | |
| 647-772, gnl|dasNov1|scaffold_256677 (1478-1225) | |
| 647-772, gnl|echTel1|scaffold_210124 (6133-5887) | |
| 647-772, gnl|hg17|chr2 (219054766-219055015) | |
| 647-772, gnl|Hg17|chr2 (219054856-219054981) | |
| 647-772, gnl|loxAfr1|scaffold_63430 (5403-5158) | |
| 647-772, gnl|mm7|chr1 (74606184-74606460) | |
| 647-772, gnl|Mm7|chr1 (74606290-74606415) | |
| 647-772, gnl|monDom2|scaffold_39 (2266991-2266741) | |
| 647-772, gnl|oryCun1|scaffold_167871 (4476-4733) | |
| 647-772, gnl|panTro1|chr13 (109212203-109212452) | |
| 647-772, gnl|rheMac2|chr12 (82199887-82200131) | |
| 647-772, gnl|rn3|chr9 (73855203-73855462) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 135-348, gnl|bosTau2|chr2 (59706213-59706001) | |
| 135-348, gnl|canFam2|chr37 (28021705-28021933) | |
| 135-348, gnl|echTel1|scaffold_210124 (9427-9194) | |
| 135-348, gnl|galGal2|chrUn (136103992-136103768) | |
| 135-348, gnl|hg17|chr2 (219047713-219047942) | |
| 135-348, gnl|Hg17|chr2 (219047762-219047974) | |
| 135-348, gnl|loxAfr1|scaffold_63430 (8133-7904) | |
| 135-348, gnl|mm7|chr1 (74602376-74602600) | |
| 135-348, gnl|Mm7|chr1 (74602423-74602631) | |
| 135-348, gnl|monDom2|scaffold_39 (2269227-2269001) | |
| 135-348, gnl|oryCun1|scaffold_167871 (1082-1313) | |
| 135-348, gnl|panTro1|chr13 (109205119-109205348) | |
| 135-348, gnl|rheMac2|chr12 (82190260-82190489) | |
| 135-348, gnl|rn3|chr9 (73851034-73851256) | |
| 477-645, gnl|bosTau2|chr2 (59705244-59705076) | |
| 477-645, gnl|Hg17|chr2 (219052961-219053129) | |
| 477-645, gnl|Mm7|chr1 (74604220-74604388) | |
| 647-772, gnl|bosTau2|chr2 (59703461-59703336) | |
| 647-772, gnl|dasNov1|scaffold_256677 (1478-1225) | |
| 647-772, gnl|echTel1|scaffold_210124 (6133-5887) | |
| 647-772, gnl|hg17|chr2 (219054766-219055015) | |
| 647-772, gnl|Hg17|chr2 (219054856-219054981) | |
| 647-772, gnl|loxAfr1|scaffold_63430 (5403-5158) | |
| 647-772, gnl|mm7|chr1 (74606184-74606460) | |
| 647-772, gnl|Mm7|chr1 (74606290-74606415) | |
| 647-772, gnl|monDom2|scaffold_39 (2266991-2266741) | |
| 647-772, gnl|oryCun1|scaffold_167871 (4476-4733) | |
| 647-772, gnl|panTro1|chr13 (109212203-109212452) | |
| 647-772, gnl|rheMac2|chr12 (82199887-82200131) | |
| 647-772, gnl|rn3|chr9 (73855203-73855462) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) | |
| clu (0.119646) |