Ss1.1-Tra1-TCH01G030080.5.5
|
CGCGCGGACCCCACGCTCTGCTGGCGGCTCTGTGGGGCGACACGGCGGGAACTCGGAGTG
GTTCGCCTGGACTCTGCTGCGGGGAGCGGCGGCGGTCTCAAGTCCTGAGATTGCGACGCC
TGCAAGGTACACCGTGACCTTGGGAGGGACCTCCTTCACTGTGAAGTACCTGCGCAGCCA
TGGCTACATGTCGACGCCGCCTCCTGTGAAGGAGTACCTGCAGGACAGGATGGAGGAGAC
CAAGGAGCTGCTCTCAGAGAAGATGGAGGAGACCAAGGACAGACTCACTGAAAAACTGCA
AGAAACCAAAGGAAAGGTTTCCTTAAAGAAAAAGGTGGAATAGGGGGCCTCATAGGCCAG
GTTTATAGACAATTCCTGCACTTTAACCCTTTGGAGACTATGGGCAGAGATTCATGCTCC
TGATTATTTTTTTGGTTAGCAGCCTAAATATAGCAGATCTCTGAGGGTTAAAGAACTAAT
AACTTTTCAAAGGTAAACATCACTAGAAAAGTCAGTGTTTTTTAAAAGAGAAATGAACCC
AGCAAAAGAATTCCACAGTAGCAGCGGTAAGCAGTGGTCTGCGTTGCCAGAGCCCTCCTC
CTTTTGTTTTTAGTTGCAGCTGTAATTCATGCAGACGAGGCAGCCTGGGAGCAGGTGGTA
CGGCCCTAGGCAGTTTTAATACTGCGTCTTCATCTTTGTTGTTCATTGAGGTTTAACTAT
ATTCCATTCTCAGTGTGTAGACAAACTGTTAACAGAACTGCCTACTAAATAAGAGATATT
TAGTCTTTCTCTAAAAACAGTGTATAACAGTATTTTAACATCTAGTTATGTGGATTTCAT
ATGAAAAAAGCTGAATGAAAATTGAGTCGTATATGTGAAGAAGATATATTGGTTATGTGT
AAATGAAAAAATTGACCCTTTAAAAATGATTTTTACCTGAAGCTTGTCATAATCAAATTT
CTTAAGCAAGTCTGCGTGGTCACAGCACTTTCTCACTCAGAACGTAAAACTCTGTTGTTC
CTGCACCATGTTGTCTCCAGCTGCCCTCTCAGAGGGAAAGGGAGAATCGTCAGAATCCAA
TTTCTTTTGGAGATCAAACACCCTCAGCGGCACCTGAGCTTGTGGTTCTCAGCAGTGTGG
GTTTGAGGATGAAGACTGTGTCTCCACCAGCCAGTCTGTCTTGATTTTATTGTGGAGTCA
GTGTTAAGATTGTAGCTCGGCTTTTCCCTTGCACTGAAACATCCTTGCTTGAGCATTTTA
CTTGAATTTCTTTAATCACAAAGCTGTCATTAAATTATCTGCTTAGAATGAAATTGACTG
TCAGGTGTGAAAGTTGCCACAATTGTGTGGGTGTGTTCGAGGATGTGTGTATCTATTTCC
TTTTGCTCTAACTGCCCTTACTTCACTTCTAACCTTTGAATGGATGCTGGAAGAGGGAGC
AGTCTCTTGTAGACTGCTCTTGATTGGATGAGGAAAGAGAATTCCGAGGGCTTGTAGGAA
GCAACCCCTCAGATCTCACTGCTGTGCCACAGAATTTCGTGTTAAGTATTGTGTGGCCAA
ACTGAGAGAGTGCTTTAAAGGGAAAAAAAAGTTTACGTTTGATGCACCTCATCAGCCTTT
GGGGACACTTCTTAAATGAATACACTCTGGTGAACTCTTTCTTTGTGCGGGTGGGCAGAC
AGGTGCAGGGCAGGGCTCACTGCCGCACTCAGCCTCCTCAGGCAGGATGGCTCCTGATAC
AGCCCAGGGTGTGATTTCAAATTGACAGCACATTTTCAAATCAAGAACCGTGAACATGTT
TTAGCCTGTTTATTAAATAACTCACAGTTTTGCAGATACTAAATGCTAAGATAGCTATTA
ATAGGTTTCTTGTTTATTTTTTTTAACAAATTGTTACTGCCTGTTTTAAAATCATGTGTT
ATGTGAAACTTTCTCCGTAAACAAACAATTTCCTTTTACTTTTCACCTTGCACAGGGCAT
GCTTTCCAATGCAGACAAATTGAGTGTCTTAGAAGCACTAATAATCCTGGGTGCCTGCCC
TTGGCTTATTAGCCCATCTGAGAGTTGTTGCCATCCAGTTTTACAATTGTGTTCATCCAG
TTACAAAAAGTGAGATGCTGGGGAGTGCTTTGTAATTCTCTAGTAAAAAACTCTCTGAAG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGCGCGGACCCCACGCTCTGCTGGCGGCTCTGTGGGGCGACACGGCGGGAACTCGGAGTG
GTTCGCCTGGACTCTGCTGCGGGGAGCGGCGGCGGTCTCAAGTCCTGAGATTGCGACGCC
TGCAAGGTACACCGTGACCTTGGGAGGGACCTCCTTCACTGTGAAGTACCTGCGCAGCCA
TGGCTACATGTCGACGCCGCCTCCTGTGAAGGAGTACCTGCAGGACAGGATGGAGGAGAC
CAAGGAGCTGCTCTCAGAGAAGATGGAGGAGACCAAGGACAGACTCACTGAAAAACTGCA
AGAAACCAAAGGAAAGGTTTCCTTAAAGAAAAAGGTGGAATAGGGGGCCTCATAGGCCAG
GTTTATAGACAATTCCTGCACTTTAACCCTTTGGAGACTATGGGCAGAGATTCATGCTCC
TGATTATTTTTTTGGTTAGCAGCCTAAATATAGCAGATCTCTGAGGGTTAAAGAACTAAT
AACTTTTCAAAGGTAAACATCACTAGAAAAGTCAGTGTTTTTTAAAAGAGAAATGAACCC
AGCAAAAGAATTCCACAGTAGCAGCGGTAAGCAGTGGTCTGCGTTGCCAGAGCCCTCCTC
CTTTTGTTTTTAGTTGCAGCTGTAATTCATGCAGACGAGGCAGCCTGGGAGCAGGTGGTA
CGGCCCTAGGCAGTTTTAATACTGCGTCTTCATCTTTGTTGTTCATTGAGGTTTAACTAT
ATTCCATTCTCAGTGTGTAGACAAACTGTTAACAGAACTGCCTACTAAATAAGAGATATT
TAGTCTTTCTCTAAAAACAGTGTATAACAGTATTTTAACATCTAGTTATGTGGATTTCAT
ATGAAAAAAGCTGAATGAAAATTGAGTCGTATATGTGAAGAAGATATATTGGTTATGTGT
AAATGAAAAAATTGACCCTTTAAAAATGATTTTTACCTGAAGCTTGTCATAATCAAATTT
CTTAAGCAAGTCTGCGTGGTCACAGCACTTTCTCACTCAGAACGTAAAACTCTGTTGTTC
CTGCACCATGTTGTCTCCAGCTGCCCTCTCAGAGGGAAAGGGAGAATCGTCAGAATCCAA
TTTCTTTTGGAGATCAAACACCCTCAGCGGCACCTGAGCTTGTGGTTCTCAGCAGTGTGG
GTTTGAGGATGAAGACTGTGTCTCCACCAGCCAGTCTGTCTTGATTTTATTGTGGAGTCA
GTGTTAAGATTGTAGCTCGGCTTTTCCCTTGCACTGAAACATCCTTGCTTGAGCATTTTA
CTTGAATTTCTTTAATCACAAAGCTGTCATTAAATTATCTGCTTAGAATGAAATTGACTG
TCAGGTGTGAAAGTTGCCACAATTGTGTGGGTGTGTTCGAGGATGTGTGTATCTATTTCC
TTTTGCTCTAACTGCCCTTACTTCACTTCTAACCTTTGAATGGATGCTGGAAGAGGGAGC
AGTCTCTTGTAGACTGCTCTTGATTGGATGAGGAAAGAGAATTCCGAGGGCTTGTAGGAA
GCAACCCCTCAGATCTCACTGCTGTGCCACAGAATTTCGTGTTAAGTATTGTGTGGCCAA
ACTGAGAGAGTGCTTTAAAGGGAAAAAAAAGTTTACGTTTGATGCACCTCATCAGCCTTT
GGGGACACTTCTTAAATGAATACACTCTGGTGAACTCTTTCTTTGTGCGGGTGGGCAGAC
AGGTGCAGGGCAGGGCTCACTGCCGCACTCAGCCTCCTCAGGCAGGATGGCTCCTGATAC
AGCCCAGGGTGTGATTTCAAATTGACAGCACATTTTCAAATCAAGAACCGTGAACATGTT
TTAGCCTGTTTATTAAATAACTCACAGTTTTGCAGATACTAAATGCTAAGATAGCTATTA
ATAGGTTTCTTGTTTATTTTTTTTAACAAATTGTTACTGCCTGTTTTAAAATCATGTGTT
ATGTGAAACTTTCTCCGTAAACAAACAATTTCCTTTTACTTTTCACCTTGCACAGGGCAT
GCTTTCCAATGCAGACAAATTGAGTGTCTTAGAAGCACTAATAATCCTGGGTGCCTGCCC
TTGGCTTATTAGCCCATCTGAGAGTTGTTGCCATCCAGTTTTACAATTGTGTTCATCCAG
TTACAAAAAGTGAGATGCTGGGGAGTGCTTTGTAATTCTCTAGTAAAAAACTCTCTGAAG |
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gi|26347819|dbj|BAC37558.1| |
Protein identifier
|
gi|26347819|dbj|BAC37558.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
103-486, gnl|bosTau2|chr24 (30465223-30464840) |
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103-486, gnl|Hg17|chr18 (13656720-13656329) |
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103-486, gnl|Mm7|chr18 (68661255-68660831) |
| |
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531-1333, gnl|bosTau2|chr24 (30464822-30464008) |
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531-1333, gnl|Hg17|chr18 (13656290-13655006) |
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531-1333, gnl|Mm7|chr18 (68660788-68659902) |
| |
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1637-1932, gnl|bosTau2|chr24 (30463768-30463474) |
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1637-1932, gnl|canFam2|chr1 (27559842-27559337) |
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1637-1932, gnl|dasNov1|scaffold_66665 (7196-6685) |
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1637-1932, gnl|Hg17|chr18 (13654702-13654389) |
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1637-1932, gnl|hg17|chr21 (25675972-25676515) |
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1637-1932, gnl|loxAfr1|scaffold_28678 (1724-2270) |
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1637-1932, gnl|Mm7|chr18 (68659645-68659372) |
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1637-1932, gnl|oryCun1|scaffold_200190 (110415-109899) |
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1637-1932, gnl|panTro1|chr22 (25646662-25647205) |
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1637-1932, gnl|rheMac2|chr3 (21306098-21305558) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
103-486, gnl|bosTau2|chr24 (30465223-30464840) |
|
103-486, gnl|Hg17|chr18 (13656720-13656329) |
|
103-486, gnl|Mm7|chr18 (68661255-68660831) |
| |
|
531-1333, gnl|bosTau2|chr24 (30464822-30464008) |
|
531-1333, gnl|Hg17|chr18 (13656290-13655006) |
|
531-1333, gnl|Mm7|chr18 (68660788-68659902) |
| |
|
1637-1932, gnl|bosTau2|chr24 (30463768-30463474) |
|
1637-1932, gnl|canFam2|chr1 (27559842-27559337) |
|
1637-1932, gnl|dasNov1|scaffold_66665 (7196-6685) |
|
1637-1932, gnl|Hg17|chr18 (13654702-13654389) |
|
1637-1932, gnl|hg17|chr21 (25675972-25676515) |
|
1637-1932, gnl|loxAfr1|scaffold_28678 (1724-2270) |
|
1637-1932, gnl|Mm7|chr18 (68659645-68659372) |
|
1637-1932, gnl|oryCun1|scaffold_200190 (110415-109899) |
|
1637-1932, gnl|panTro1|chr22 (25646662-25647205) |
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1637-1932, gnl|rheMac2|chr3 (21306098-21305558) |
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cst (0.280073) |
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med (0.232504) |
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hea (0.204499) |
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fty (0.17584) |
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tbr (0.154178) |
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cag (0.151194) |
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ski (0.146735) |
|
hyp (0.142837) |
|
hlv (0.139256) |
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ssp (0.13552) |
|
pla (0.133672) |
|
ret (0.128733) |
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thg (0.126791) |
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bla (0.124347) |
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cty (0.10408) |
|
ldo (0.0970026) |
|
cst (0.280073) |
|
med (0.232504) |
|
hea (0.204499) |
|
fty (0.17584) |
|
tbr (0.154178) |
|
cag (0.151194) |
|
ski (0.146735) |
|
hyp (0.142837) |
|
hlv (0.139256) |
|
ssp (0.13552) |
|
pla (0.133672) |
|
ret (0.128733) |
|
thg (0.126791) |
|
bla (0.124347) |
|
cty (0.10408) |
|
ldo (0.0970026) |
