Non-Coding RNA Search

Ss1.1-Tra1-TCH01G050032.5

Sequence:


               
               TGTAGACAGAACAGAGCCCAGCATACTATCTATCGCCCAAGAACCAAGCCCAGCTGGCAC
CTGATTTTCACATTTAGTTGTTTTTTTTTAAAATGTATTTTTTAAGAAAAGTAGGGTTGA
TTTACAATGTTTCTTCAATGTCTGTTCTACAGCAGAGTGACCCAGAACACACAGTTCCCC
GTGTTGCACAGTAGGACCCCATTGCACATCCATTCCAAGGGTAACAGTTTGCCTCCATCA
ACCCCAAACTCCCCGTCCGTCCCACTCCCTCCCACCTCATCTCTAGGTTTTTTACATTTC
TAAATGGTCAGAAGAAGAAAGAAGAATCTTTTTCATGACACAAAAATA------------
------------------------------------------------------------
CTAGTGGCTGCCTTTGCACTAGGTGACAGAGCTGAATAGTTGCAAAAATGACCCACGAGC
CAAAAATACTTCCTCCTTGGCTTTTACAGGAAGAGCTGGTGACCAGGAGAGGGTGTCTAA
CATGCTTTCCTCTAAATGTCCTACGTTTTAGTTGTTCAAGATCCAGGAGGGCTTCATGGA
AGAGGCGGAGGTTTAAGAAATGGGCTGGAGTTTGACATAGCCACCGAGGAAAGGGTGGAG
AGTCCTCTGGGCAGGAGGAAATATGGGGGTAAATACTCTGAGGGTGGAGATAAGCCAGAA
CAGTTCCTGGAACAGTGAATGAAGTTGCCTGACTAGGTTGGAGAAGATGCTAAAAACTGG
ATACAGCTGAGAAGCGAAGTTTGTCTGATTTCCTTCAGTTCTGCTGCTTATTTTGCTTAG
GCTTAACCAAGCCTTTCGTCTGCAAGTATCCTTGTACATATATATCTGATTTTCTACTTA
GGATAAGTTCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTAGACAGAACAGAGCCCAGCATACTATCTATCGCCCAAGAACCAAGCCCAGCTGGCAC
CTGATTTTCACATTTAGTTGTTTTTTTTTAAAATGTATTTTTTAAGAAAAGTAGGGTTGA
TTTACAATGTTTCTTCAATGTCTGTTCTACAGCAGAGTGACCCAGAACACACAGTTCCCC
GTGTTGCACAGTAGGACCCCATTGCACATCCATTCCAAGGGTAACAGTTTGCCTCCATCA
ACCCCAAACTCCCCGTCCGTCCCACTCCCTCCCACCTCATCTCTAGGTTTTTTACATTTC
TAAATGGTCAGAAGAAGAAAGAAGAATCTTTTTCATGACACAAAAATA------------
------------------------------------------------------------
CTAGTGGCTGCCTTTGCACTAGGTGACAGAGCTGAATAGTTGCAAAAATGACCCACGAGC
CAAAAATACTTCCTCCTTGGCTTTTACAGGAAGAGCTGGTGACCAGGAGAGGGTGTCTAA
CATGCTTTCCTCTAAATGTCCTACGTTTTAGTTGTTCAAGATCCAGGAGGGCTTCATGGA
AGAGGCGGAGGTTTAAGAAATGGGCTGGAGTTTGACATAGCCACCGAGGAAAGGGTGGAG
AGTCCTCTGGGCAGGAGGAAATATGGGGGTAAATACTCTGAGGGTGGAGATAAGCCAGAA
CAGTTCCTGGAACAGTGAATGAAGTTGCCTGACTAGGTTGGAGAAGATGCTAAAAACTGG
ATACAGCTGAGAAGCGAAGTTTGTCTGATTTCCTTCAGTTCTGCTGCTTATTTTGCTTAG
GCTTAACCAAGCCTTTCGTCTGCAAGTATCCTTGTACATATATATCTGATTTTCTACTTA
GGATAAGTTCTA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               352-834, gnl|bosTau2|chr19 (50876851-50877321)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               352-834, gnl|bosTau2|chr19 (50876851-50877321)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               gul (0.177588)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)