Ss1.1-Tra1-TCH01G050033.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCTTGAGTTGGGTTGCGCAGCAGGCGGGTGAAGCCGGGAGGTCCCCTGAGGGCGGCGGT TGGGGACATGGCATCCAACTACCGCACAAGTTCAGACCAATGGAAGAAAAGAGCAGCAAA AGTTGAATTGAATGAAACCCAAAAGCAAGAAATTAAAGAGGCCTTTGATTTATTCGATGT TGATGGGTCTGGAACTATAGATGTGAAAGAATTGAAGATTGCAATGAGGGCCTTAGGATT TGAACCAAAGAAAGAAGAAATTAAAAAATTGATAGCTGAAATTGACAAAGAAGGAATCGG CACCATTGGTTTTGAAGATTTTTTTGCCATAATGAGTGTAAAAATGAGTGAAAAAGATGA AAAAGAAGAAATACTGAAGACTTTCAAATTATTTGATGATGATGATACAGGAAGCATATC ACTAAACAATATCAAGAGGGTTGCTAAGGAACTAGGAGAAAATTTAACAGATGATGAACT TCAGGAAATGCTTGATGAAGCTGATCGCGATGGGGATGGAGAAATAAACGAGGAAGAATT TTTGAGAATGATGAAAAAGACTACTCTTTATTAATACTGTTTTTTGTTCCCTCTGGAAAG TTGTTAACAAATTTGTATTTGTTAGAAGTTCCATAATAATTTGAATGGATTCATTTTCAG TTTTTAATGTAAATGCACAAATTGGTTTCTTGATATCTAATCCATGTGAGAATTTACGTC TCTCTACAATATGTTGTTAAATCTACAGCATCAAGAAACAAAGCAAATGTAATAATTTTC TTGAAGCAAGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCTTGAGTTGGGTTGCGCAGCAGGCGGGTGAAGCCGGGAGGTCCCCTGAGGGCGGCGGT TGGGGACATGGCATCCAACTACCGCACAAGTTCAGACCAATGGAAGAAAAGAGCAGCAAA AGTTGAATTGAATGAAACCCAAAAGCAAGAAATTAAAGAGGCCTTTGATTTATTCGATGT TGATGGGTCTGGAACTATAGATGTGAAAGAATTGAAGATTGCAATGAGGGCCTTAGGATT TGAACCAAAGAAAGAAGAAATTAAAAAATTGATAGCTGAAATTGACAAAGAAGGAATCGG CACCATTGGTTTTGAAGATTTTTTTGCCATAATGAGTGTAAAAATGAGTGAAAAAGATGA AAAAGAAGAAATACTGAAGACTTTCAAATTATTTGATGATGATGATACAGGAAGCATATC ACTAAACAATATCAAGAGGGTTGCTAAGGAACTAGGAGAAAATTTAACAGATGATGAACT TCAGGAAATGCTTGATGAAGCTGATCGCGATGGGGATGGAGAAATAAACGAGGAAGAATT TTTGAGAATGATGAAAAAGACTACTCTTTATTAATACTGTTTTTTGTTCCCTCTGGAAAG TTGTTAACAAATTTGTATTTGTTAGAAGTTCCATAATAATTTGAATGGATTCATTTTCAG TTTTTAATGTAAATGCACAAATTGGTTTCTTGATATCTAATCCATGTGAGAATTTACGTC TCTCTACAATATGTTGTTAAATCTACAGCATCAAGAAACAAAGCAAATGTAATAATTTTC TTGAAGCAAGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 87-220, gnl|bosTau2|chr17 (20259533-20259666) | |
| 87-220, gnl|canFam2|chr19 (20560991-20560880) | |
| 87-220, gnl|danRer3|chrNA (89641773-89641870) | |
| 87-220, gnl|dasNov1|scaffold_19216 (28740-28629) | |
| 87-220, gnl|echTel1|scaffold_309600 (99394-99505) | |
| 87-220, gnl|fr1|chrUn (202566550-202566637) | |
| 87-220, gnl|galGal2|chr4 (54169301-54169190) | |
| 87-220, gnl|hg17|chr4 (124010796-124010902) | |
| 87-220, gnl|Hg17|chr4 (124010937-124010809) | |
| 87-220, gnl|loxAfr1|scaffold_2899 (33138-33028) | |
| 87-220, gnl|mm7|chr3 (37121058-37121169) | |
| 87-220, gnl|Mm7|chr3 (37121204-37121071) | |
| 87-220, gnl|monDom2|scaffold_32 (4485831-4485720) | |
| 87-220, gnl|oryCun1|scaffold_202578 (87176-87070) | |
| 87-220, gnl|panTro1|chr3 (140840813-140840919) | |
| 87-220, gnl|rheMac2|chr5 (115105207-115105313) | |
| 87-220, gnl|rn3|chr2 (123803911-123804018) | |
| 87-220, gnl|tetNig1|chr20 (2273287-2273374) | |
| 87-220, gnl|xenTro1|scaffold_762 (351722-351615) | |
| 482-792, gnl|bosTau2|chr17 (20261845-20262141) | |
| 482-792, gnl|Hg17|chr4 (124009398-124009088) | |
| 482-792, gnl|Mm7|chr3 (37119965-37119651) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 87-220, gnl|bosTau2|chr17 (20259533-20259666) | |
| 87-220, gnl|canFam2|chr19 (20560991-20560880) | |
| 87-220, gnl|danRer3|chrNA (89641773-89641870) | |
| 87-220, gnl|dasNov1|scaffold_19216 (28740-28629) | |
| 87-220, gnl|echTel1|scaffold_309600 (99394-99505) | |
| 87-220, gnl|fr1|chrUn (202566550-202566637) | |
| 87-220, gnl|galGal2|chr4 (54169301-54169190) | |
| 87-220, gnl|hg17|chr4 (124010796-124010902) | |
| 87-220, gnl|Hg17|chr4 (124010937-124010809) | |
| 87-220, gnl|loxAfr1|scaffold_2899 (33138-33028) | |
| 87-220, gnl|mm7|chr3 (37121058-37121169) | |
| 87-220, gnl|Mm7|chr3 (37121204-37121071) | |
| 87-220, gnl|monDom2|scaffold_32 (4485831-4485720) | |
| 87-220, gnl|oryCun1|scaffold_202578 (87176-87070) | |
| 87-220, gnl|panTro1|chr3 (140840813-140840919) | |
| 87-220, gnl|rheMac2|chr5 (115105207-115105313) | |
| 87-220, gnl|rn3|chr2 (123803911-123804018) | |
| 87-220, gnl|tetNig1|chr20 (2273287-2273374) | |
| 87-220, gnl|xenTro1|scaffold_762 (351722-351615) | |
| 482-792, gnl|bosTau2|chr17 (20261845-20262141) | |
| 482-792, gnl|Hg17|chr4 (124009398-124009088) | |
| 482-792, gnl|Mm7|chr3 (37119965-37119651) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (1.24688) | |
| cmu (0.186393) | |
| ese (0.126502) |