Ss1.1-Tra1-TCH01G060003.5
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CTAAATTCCAACCATCTACGTGGCTAATGTAGGAGTTGATTAGTTAGTGTACTCTTCTTG
GTCAGTGTTTTGACTCCTTGGGGAAAAGTTATTTTGCTGCTAGCAGTCAACATTTGCTAT
CCATATAAACTCATCCTGATGCACCCAAATTTGAGAACAGCTCCAATTTACAATTTGTTG
TCATCAAGTTGAAAAATACCGTCCACTCAAAATTGGAAAGATCAGGCAATATGGTGAAGC
CATGTTTATATACAAATGCAGTTTAAACCACATTGGCAGTACCTGAGATTTCTGTCATTG
TGAAGGATGAAAAGATGGACCAGTCCATGAATGGATTTCATCTTACCCTTCTCCCATCGG
CTGTCAAAGTTTCACATTCTGAATTTGGGGTAAAGCCACTTGCAAGTTCAGTCATGGAGC
TAAGGGGGCCTAAACCATTAATAGACGTTTTGATAAATGATACTTTTAGTATATTTTTAA
AGCAATACAGTGCTGAAAAAAAAAACCCATTTTGCCATGGTTAGCCCCCAGACGGTGGCA
GGTCTTCAAACGACCCAAGTTCTAAGGAACAAGAAAAAAGCTATCATTTCCAAAAGAAAC
AGCAATAGATTTTGAAAGAAGGTAGAGATTATGAATTCAATGCCTAAACTGCAGTCTTTG
TTTTTCTAAAAATCTTCTTTCCTATTGAGTGCCATCCATATAATTATTAATGGCCAGCTT
CCAAAGAAAATATCCCCTTTGCTAAGAATATGAAAGTGTTAAAAATTCATTCCCAAGTCT
GATGAATACATACTTACTAGGAGCAAGTCTCTAAATTTTTAAAATGAGTCAGGGGAGCAA
GTAGCAACTCCTGAAACAGGCAAGAGAAATGCCATTAAAAAACAAATTTTTCTTGGAGTT
CCCGTCTTAGCACAGTGGAAACGAATCTGACTAGGAACCATAAGGTGGCAGGTTCGATCC
CTGGCCTCGCTCAGTGGGTTAAGGATCTGGCTGTGAGCTCTGGTGTAGGTTGCAGATGCG
GCTCGGATCCCACGTTGCTGTGGCTCTGGTGTAGGCCGGTGGCTACAGCTCCGATTCGAC
CCCTAGCCTGGGAACCTCCATGTGCCGAAAGTGCGG------------AAAAGAAAAAAA
ATGTTTTTCTTAAAAAAAAAAGTTTCTCATCTGTTTTATTCTGAATTCTCCTTACATCTT
GAACTGAAGAGGAAAAACCAGCGCTCTGGATAAGTCACTGAGCTTTAGAGGAGAAAGAAG
ACAGACAGTCCACATTCTGGTTACTAGTCTTGTTTTCCCATCTCGGCAACCACCTCAGAT
TTGCCAGTGAAAGTTTATCCTCTCCTCTTTGCCTTCATCTGCCCGAGCCAGAGACCATGC
TGTTATTATGTATGTTTGCTTCCCAAAGCCCTGGCTTAAACATTTTTGCTTCTGTGCTCC
TGATCTCTCTCACTCTTAAATTAAGGTCCAAGGGGATAAAGATGATCATGACTGCATGTT
AGTCAATGAGGCTACCCCTTCCTTCAGGGAAACGTTTCCATTTGTCTGAACAGTTTTGGG |
Blue-coloured subsequences are predicted RNA structures by RNAz
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CTAAATTCCAACCATCTACGTGGCTAATGTAGGAGTTGATTAGTTAGTGTACTCTTCTTG
GTCAGTGTTTTGACTCCTTGGGGAAAAGTTATTTTGCTGCTAGCAGTCAACATTTGCTAT
CCATATAAACTCATCCTGATGCACCCAAATTTGAGAACAGCTCCAATTTACAATTTGTTG
TCATCAAGTTGAAAAATACCGTCCACTCAAAATTGGAAAGATCAGGCAATATGGTGAAGC
CATGTTTATATACAAATGCAGTTTAAACCACATTGGCAGTACCTGAGATTTCTGTCATTG
TGAAGGATGAAAAGATGGACCAGTCCATGAATGGATTTCATCTTACCCTTCTCCCATCGG
CTGTCAAAGTTTCACATTCTGAATTTGGGGTAAAGCCACTTGCAAGTTCAGTCATGGAGC
TAAGGGGGCCTAAACCATTAATAGACGTTTTGATAAATGATACTTTTAGTATATTTTTAA
AGCAATACAGTGCTGAAAAAAAAAACCCATTTTGCCATGGTTAGCCCCCAGACGGTGGCA
GGTCTTCAAACGACCCAAGTTCTAAGGAACAAGAAAAAAGCTATCATTTCCAAAAGAAAC
AGCAATAGATTTTGAAAGAAGGTAGAGATTATGAATTCAATGCCTAAACTGCAGTCTTTG
TTTTTCTAAAAATCTTCTTTCCTATTGAGTGCCATCCATATAATTATTAATGGCCAGCTT
CCAAAGAAAATATCCCCTTTGCTAAGAATATGAAAGTGTTAAAAATTCATTCCCAAGTCT
GATGAATACATACTTACTAGGAGCAAGTCTCTAAATTTTTAAAATGAGTCAGGGGAGCAA
GTAGCAACTCCTGAAACAGGCAAGAGAAATGCCATTAAAAAACAAATTTTTCTTGGAGTT
CCCGTCTTAGCACAGTGGAAACGAATCTGACTAGGAACCATAAGGTGGCAGGTTCGATCC
CTGGCCTCGCTCAGTGGGTTAAGGATCTGGCTGTGAGCTCTGGTGTAGGTTGCAGATGCG
GCTCGGATCCCACGTTGCTGTGGCTCTGGTGTAGGCCGGTGGCTACAGCTCCGATTCGAC
CCCTAGCCTGGGAACCTCCATGTGCCGAAAGTGCGG------------AAAAGAAAAAAA
ATGTTTTTCTTAAAAAAAAAAGTTTCTCATCTGTTTTATTCTGAATTCTCCTTACATCTT
GAACTGAAGAGGAAAAACCAGCGCTCTGGATAAGTCACTGAGCTTTAGAGGAGAAAGAAG
ACAGACAGTCCACATTCTGGTTACTAGTCTTGTTTTCCCATCTCGGCAACCACCTCAGAT
TTGCCAGTGAAAGTTTATCCTCTCCTCTTTGCCTTCATCTGCCCGAGCCAGAGACCATGC
TGTTATTATGTATGTTTGCTTCCCAAAGCCCTGGCTTAAACATTTTTGCTTCTGTGCTCC
TGATCTCTCTCACTCTTAAATTAAGGTCCAAGGGGATAAAGATGATCATGACTGCATGTT
AGTCAATGAGGCTACCCCTTCCTTCAGGGAAACGTTTCCATTTGTCTGAACAGTTTTGGG |
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1-495, gnl|bosTau2|chr14 (24813272-24812781) |
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1-495, gnl|canFam2|chr29 (30890208-30891178) |
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1-495, gnl|dasNov1|scaffold_1124 (91428-90494) |
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1-495, gnl|echTel1|scaffold_283322 (127729-128746) |
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1-495, gnl|hg17|chr8 (81707608-81708595) |
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1-495, gnl|Hg17|chr8 (81708174-81707651) |
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1-495, gnl|loxAfr1|scaffold_4312 (26143-27159) |
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1-495, gnl|mm7|chr3 (9437332-9438135) |
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1-495, gnl|Mm7|chr3 (9437824-9437370) |
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1-495, gnl|panTro1|chr7 (83837889-83838883) |
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1-495, gnl|rheMac2|chr8 (83073247-83074235) |
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1-495, gnl|rn3|chr2 (94346784-94345919) |
| |
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498-894, gnl|bosTau2|chr14 (24812746-24812328) |
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498-894, gnl|Hg17|chr8 (81707613-81706965) |
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498-894, gnl|Mm7|chr3 (9437337-9436867) |
| |
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1140-1547, gnl|bosTau2|chr14 (24812318-24811912) |
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1140-1547, gnl|Hg17|chr8 (81706956-81706561) |
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1140-1547, gnl|Mm7|chr3 (9436857-9436460) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-495, gnl|bosTau2|chr14 (24813272-24812781) |
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1-495, gnl|canFam2|chr29 (30890208-30891178) |
|
1-495, gnl|dasNov1|scaffold_1124 (91428-90494) |
|
1-495, gnl|echTel1|scaffold_283322 (127729-128746) |
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1-495, gnl|hg17|chr8 (81707608-81708595) |
|
1-495, gnl|Hg17|chr8 (81708174-81707651) |
|
1-495, gnl|loxAfr1|scaffold_4312 (26143-27159) |
|
1-495, gnl|mm7|chr3 (9437332-9438135) |
|
1-495, gnl|Mm7|chr3 (9437824-9437370) |
|
1-495, gnl|panTro1|chr7 (83837889-83838883) |
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1-495, gnl|rheMac2|chr8 (83073247-83074235) |
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1-495, gnl|rn3|chr2 (94346784-94345919) |
| |
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498-894, gnl|bosTau2|chr14 (24812746-24812328) |
|
498-894, gnl|Hg17|chr8 (81707613-81706965) |
|
498-894, gnl|Mm7|chr3 (9437337-9436867) |
| |
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1140-1547, gnl|bosTau2|chr14 (24812318-24811912) |
|
1140-1547, gnl|Hg17|chr8 (81706956-81706561) |
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1140-1547, gnl|Mm7|chr3 (9436857-9436460) |
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ece (0.229305) |
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spl (0.143184) |
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ece (0.229305) |
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spl (0.143184) |
