Ss1.1-Tra1-TCH01G100047.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCTTGTTACCATGGTAGCCAGAGTGTATAACCAGAGCTTGAGCAGCGGAGATCTCAAAA GCATTCCTGCAGGGCTCCGGCGCGGGTGCTCCTTCAGAGCCTAGCGGCCACTCTCAGTGG GCACCCAGCCGGAGTCTTACCTAAGAGTGAGGTTTCCGTTTGGGTCTATCACACAACGGG CAAGGTTACCCTAACGCCCCTTTCCTCCAGAGGTGGCTTCCCTGCCACAGGCGCCGGGTC TGGATGAGGTCTCTGTTCGCATAGCCCTCCCATGGCTTCCCAGGAGAGGGTGGAGACTGT GACCAAAGGAACTGGCTTCTGGCGCTGCCCCAAGCCGGCCGCTTACACCCCAAGAACCTG CGAGCTGCTCAGAGCCATGATGAAGGAATCCAAACTGACTAACTTCCAACAGCGCCACAT CATGGACACCATGAAAAGAGGAGACGCTCTCCCGTTACACTGCAGCCCAACTTCCAGCCA GAAGGTCTTGCCTGCCAGGCAGCCGGCCTCGGCCATCTACCTGCCACCCATCCTGGCAGC CCGGTCCCACCTCCGGCCTGCCAGCCTGTGCCAAGCCAACGGGGCCTACAGCCGGGAGCA GTTCAGGCCTCAAGCCACCCGGGATCTGGAGAAGGAGAAGCGAAGACTCCAGAATATTTT TGCCACGGGGAAGGAGCCAGAGGAAAGGAAGAGAAAGCCCCCTCCTGTGCAGCAGGAGGC CCCAGCGCCTGAGCTGGACCGGTTTGAAGAACTGGTGAAGGAAATCCAGGAGAGGAAAGC GTTCTTGGCTGACATGGAGGCCCTGGGGCAGGGCAGGCGGTACCGAGGGGTCATCCTCAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCTTGTTACCATGGTAGCCAGAGTGTATAACCAGAGCTTGAGCAGCGGAGATCTCAAAA GCATTCCTGCAGGGCTCCGGCGCGGGTGCTCCTTCAGAGCCTAGCGGCCACTCTCAGTGG GCACCCAGCCGGAGTCTTACCTAAGAGTGAGGTTTCCGTTTGGGTCTATCACACAACGGG CAAGGTTACCCTAACGCCCCTTTCCTCCAGAGGTGGCTTCCCTGCCACAGGCGCCGGGTC TGGATGAGGTCTCTGTTCGCATAGCCCTCCCATGGCTTCCCAGGAGAGGGTGGAGACTGT GACCAAAGGAACTGGCTTCTGGCGCTGCCCCAAGCCGGCCGCTTACACCCCAAGAACCTG CGAGCTGCTCAGAGCCATGATGAAGGAATCCAAACTGACTAACTTCCAACAGCGCCACAT CATGGACACCATGAAAAGAGGAGACGCTCTCCCGTTACACTGCAGCCCAACTTCCAGCCA GAAGGTCTTGCCTGCCAGGCAGCCGGCCTCGGCCATCTACCTGCCACCCATCCTGGCAGC CCGGTCCCACCTCCGGCCTGCCAGCCTGTGCCAAGCCAACGGGGCCTACAGCCGGGAGCA GTTCAGGCCTCAAGCCACCCGGGATCTGGAGAAGGAGAAGCGAAGACTCCAGAATATTTT TGCCACGGGGAAGGAGCCAGAGGAAAGGAAGAGAAAGCCCCCTCCTGTGCAGCAGGAGGC CCCAGCGCCTGAGCTGGACCGGTTTGAAGAACTGGTGAAGGAAATCCAGGAGAGGAAAGC GTTCTTGGCTGACATGGAGGCCCTGGGGCAGGGCAGGCGGTACCGAGGGGTCATCCTCAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 116-262, gnl|bosTau2|chr5 (67028792-67028938) | |
| 116-262, gnl|canFam2|chr10 (29780128-29779612) | |
| 116-262, gnl|echTel1|scaffold_215385 (1345-895) | |
| 116-262, gnl|hg17|chr22 (36673680-36674158) | |
| 116-262, gnl|Hg17|chr22 (36673979-36673837) | |
| 116-262, gnl|mm7|chr15 (79223958-79224253) | |
| 116-262, gnl|panTro1|chr23 (36854563-36855041) | |
| 116-262, gnl|rheMac2|chr10 (81884933-81885420) | |
| 116-262, gnl|rn3|chr7 (117156725-117157019) | |
| 438-624, gnl|bosTau2|chr5 (67033819-67034005) | |
| 438-624, gnl|canFam2|chr10 (29784932-29784710) | |
| 438-624, gnl|dasNov1|scaffold_92382 (778-553) | |
| 438-624, gnl|echTel1|scaffold_132666 (731-507) | |
| 438-624, gnl|galGal2|chr1 (47772965-47772744) | |
| 438-624, gnl|hg17|chr22 (36667760-36667983) | |
| 438-624, gnl|Hg17|chr22 (36667970-36667784) | |
| 438-624, gnl|mm7|chr15 (79219235-79219454) | |
| 438-624, gnl|Mm7|chr15 (79219441-79219255) | |
| 438-624, gnl|monDom2|scaffold_297 (38940-38746) | |
| 438-624, gnl|oryCun1|scaffold_89650 (800-575) | |
| 438-624, gnl|panTro1|chr23 (36848654-36848877) | |
| 438-624, gnl|rheMac2|chr10 (81879446-81879663) | |
| 438-624, gnl|rn3|chr7 (117150984-117151203) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 116-262, gnl|bosTau2|chr5 (67028792-67028938) | |
| 116-262, gnl|canFam2|chr10 (29780128-29779612) | |
| 116-262, gnl|echTel1|scaffold_215385 (1345-895) | |
| 116-262, gnl|hg17|chr22 (36673680-36674158) | |
| 116-262, gnl|Hg17|chr22 (36673979-36673837) | |
| 116-262, gnl|mm7|chr15 (79223958-79224253) | |
| 116-262, gnl|panTro1|chr23 (36854563-36855041) | |
| 116-262, gnl|rheMac2|chr10 (81884933-81885420) | |
| 116-262, gnl|rn3|chr7 (117156725-117157019) | |
| 438-624, gnl|bosTau2|chr5 (67033819-67034005) | |
| 438-624, gnl|canFam2|chr10 (29784932-29784710) | |
| 438-624, gnl|dasNov1|scaffold_92382 (778-553) | |
| 438-624, gnl|echTel1|scaffold_132666 (731-507) | |
| 438-624, gnl|galGal2|chr1 (47772965-47772744) | |
| 438-624, gnl|hg17|chr22 (36667760-36667983) | |
| 438-624, gnl|Hg17|chr22 (36667970-36667784) | |
| 438-624, gnl|mm7|chr15 (79219235-79219454) | |
| 438-624, gnl|Mm7|chr15 (79219441-79219255) | |
| 438-624, gnl|monDom2|scaffold_297 (38940-38746) | |
| 438-624, gnl|oryCun1|scaffold_89650 (800-575) | |
| 438-624, gnl|panTro1|chr23 (36848654-36848877) | |
| 438-624, gnl|rheMac2|chr10 (81879446-81879663) | |
| 438-624, gnl|rn3|chr7 (117150984-117151203) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.351185) | |
| nep (0.183925) |