Ss1.1-Tra1-TCH01G110033.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGTCAGAGGCAGTCTGCGGAACCGGCTTACTCGAGCGCGCCGGAACCTGGTCCCGGGCT GTACCCGGAGCGGGCCATGCCCCCGCGGGAGCTGAGCGAGGCCGAGTCGTCCCCGCTTCG GGCCCCGACCCCTCCCCCGCGGCGGGGCAGCGCGTCCCCGGAGCTGGGCATCAAGTGCGT TCTGGTGGGCGACGGCGCTGTGGGCAAGAGCAGCCTCATCGTCAGCTACACCTGCAATGG GTACCCCGCGCGCTACAGGCCCACGGCGCTGGACACCTTCTCCGTGCAAGTCCTGGTTGA TGGAGCCCCGGTGCGCATTGAGCTCTGGGACACAGCGGGACAGGAAGACTTTGACCGCCT TCGCTCGCTCTGCTACCCAGATACGGATGTCTTCCTGGCCTGCTTCAGCGTGGTGCAGCC CAGCTCCTTCCAAAACATCACAGAGAAATGGCTGCCGGAGATCCGCACTCACAACCCCCA GGCGCCAGTGCTGCTGGTGGGCACGCAGGCAGATCTGAGAGACGATGTCAATGTACTGAT TGAGCTGGACCAGGGAGGCCGGGAGGGACCTGTGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGTCAGAGGCAGTCTGCGGAACCGGCTTACTCGAGCGCGCCGGAACCTGGTCCCGGGCT GTACCCGGAGCGGGCCATGCCCCCGCGGGAGCTGAGCGAGGCCGAGTCGTCCCCGCTTCG GGCCCCGACCCCTCCCCCGCGGCGGGGCAGCGCGTCCCCGGAGCTGGGCATCAAGTGCGT TCTGGTGGGCGACGGCGCTGTGGGCAAGAGCAGCCTCATCGTCAGCTACACCTGCAATGG GTACCCCGCGCGCTACAGGCCCACGGCGCTGGACACCTTCTCCGTGCAAGTCCTGGTTGA TGGAGCCCCGGTGCGCATTGAGCTCTGGGACACAGCGGGACAGGAAGACTTTGACCGCCT TCGCTCGCTCTGCTACCCAGATACGGATGTCTTCCTGGCCTGCTTCAGCGTGGTGCAGCC CAGCTCCTTCCAAAACATCACAGAGAAATGGCTGCCGGAGATCCGCACTCACAACCCCCA GGCGCCAGTGCTGCTGGTGGGCACGCAGGCAGATCTGAGAGACGATGTCAATGTACTGAT TGAGCTGGACCAGGGAGGCCGGGAGGGACCTGTGCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-284, gnl|bosTau2|chr10 (25689090-25688807) | |
| 1-284, gnl|Hg17|chr15 (38953717-38953422) | |
| 1-284, gnl|Mm7|chr2 (119012057-119011765) | |
| 342-576, gnl|bosTau2|chr10 (25687773-25687539) | |
| 342-576, gnl|canFam2|chr30 (10993324-10993618) | |
| 342-576, gnl|danRer3|chr20 (38421425-38421716) | |
| 342-576, gnl|dasNov1|scaffold_66857 (43468-43758) | |
| 342-576, gnl|echTel1|scaffold_226257 (8651-8944) | |
| 342-576, gnl|fr1|chrUn (156719299-156719009) | |
| 342-576, gnl|galGal2|chr5 (21551018-21551309) | |
| 342-576, gnl|hg17|chr15 (38952701-38952995) | |
| 342-576, gnl|Hg17|chr15 (38952993-38952759) | |
| 342-576, gnl|loxAfr1|scaffold_3260 (42381-42090) | |
| 342-576, gnl|mm7|chr2 (119011046-119011340) | |
| 342-576, gnl|Mm7|chr2 (119011338-119011104) | |
| 342-576, gnl|monDom2|scaffold_12 (1279750-1279456) | |
| 342-576, gnl|oryCun1|scaffold_210939 (3903-4197) | |
| 342-576, gnl|panTro1|chr16 (38872986-38873280) | |
| 342-576, gnl|rheMac2|chr7 (19263962-19264256) | |
| 342-576, gnl|rn3|chr3 (105684506-105684800) | |
| 342-576, gnl|tetNig1|chr14 (6664321-6664611) | |
| 342-576, gnl|xenTro1|scaffold_852 (187203-187494) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-284, gnl|bosTau2|chr10 (25689090-25688807) | |
| 1-284, gnl|Hg17|chr15 (38953717-38953422) | |
| 1-284, gnl|Mm7|chr2 (119012057-119011765) | |
| 342-576, gnl|bosTau2|chr10 (25687773-25687539) | |
| 342-576, gnl|canFam2|chr30 (10993324-10993618) | |
| 342-576, gnl|danRer3|chr20 (38421425-38421716) | |
| 342-576, gnl|dasNov1|scaffold_66857 (43468-43758) | |
| 342-576, gnl|echTel1|scaffold_226257 (8651-8944) | |
| 342-576, gnl|fr1|chrUn (156719299-156719009) | |
| 342-576, gnl|galGal2|chr5 (21551018-21551309) | |
| 342-576, gnl|hg17|chr15 (38952701-38952995) | |
| 342-576, gnl|Hg17|chr15 (38952993-38952759) | |
| 342-576, gnl|loxAfr1|scaffold_3260 (42381-42090) | |
| 342-576, gnl|mm7|chr2 (119011046-119011340) | |
| 342-576, gnl|Mm7|chr2 (119011338-119011104) | |
| 342-576, gnl|monDom2|scaffold_12 (1279750-1279456) | |
| 342-576, gnl|oryCun1|scaffold_210939 (3903-4197) | |
| 342-576, gnl|panTro1|chr16 (38872986-38873280) | |
| 342-576, gnl|rheMac2|chr7 (19263962-19264256) | |
| 342-576, gnl|rn3|chr3 (105684506-105684800) | |
| 342-576, gnl|tetNig1|chr14 (6664321-6664611) | |
| 342-576, gnl|xenTro1|scaffold_852 (187203-187494) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |