Non-Coding RNA Search

Ss1.1-Tra1-TCH01H010018.5

Sequence:


               
               CTCCCAAGAGATTGGCCACAGTGCCCTGTGCTGTACAGCAGGACCCCGTTACCACTCCAT
TCTCAATGTACTAGTTCCTATGCAAACATTTCTTAGCACAACTGATTTTGTGTCTGAGTA
ACTAAGTAGGATACATTTTTTTTTTTTGTAACTCATTCACCTTTGTAAGAAAATGTCGTC
TCACTGAACACCCTTGAAGACTGGCTTGACTGCTATTTCCCATTATTTCGTCTTTCCGTA
AGTCAAAGAAAAATGAAGCTAGAGTGTATGTTCTCAGTTTGCAATCTACAAATGTCTAAC
TCTAGCGTCTTAAGGAGTTCTTTTTCTAGTCTGAGCAAGGGGCTTCTCCATCTAAAATAC
GGACGTATTTCCCCCACACTTTAGAGTTAACTGCATGGGAACATCCCAACAGCGTTGATC
GAAAGGTTTTGAAAATCCCTCCTGATTGTTTGTCAGATGTTGCAATCTTCTGATGGCTAC
TCTCATTTTATTTATCTTATCTTGTTCTCTTGCTGATTATTGGCAGACTCAGTCTCTCTG
TTTTCACAAAGAACTCATGAAGAGGACGATAGGGAAACCCACGTATGCTTTTGAAGCTAG
GGAGTATGTTGTAAGTTTACCTGTGACGGCCAGGTCGTGCGGTCACGGCACAGGCACTAA
CCCCTGTGACGGCACCAAGACTGGGGACCCAGGTGCTCTCTGACCCGGGCATCGGGAAAA
GCCCAGCTGGGTCAAGTCAACCACAGGCTTCTGCATCCGGAAAAGTCGCCTGGAAAAGGG
AACCAAACTTCCCAATAATAATCCAGCTTCCTGAAAATGCCAGGAAGCCGGGCTTGTGTT
TTCCCTCTTTTCGTGGACTGGAACTGCCATCTGAGACAATGTCACTGAGTATGATTTTAC
GGCAGCATGTCACCCATAAAACGCAGCTGCAGAGCATGGTTGCAGACGGCAGTGTGTATG
TATGTAGCAAGCTTACCCACACTCACATCTGAAACAGATGGATCTGCTAAAAAAACAAAA
ACAAAACAAAAACAAAAAACCAGCGAAGCCTGAGCAGGGTCATAGAGCAGTGAAATGACT
TTCCGTGGCCCTTAAACCACCGTGACTGACATATTCGTGTTCGCTGTCCCCTTTCTTTGC
ACTCGAGGTTAGTACCTGTGACGGCGCAATAACACATGGTCCCGCTAGCTCTGTGTGCCC
TCATGTGTTATTGGCACTTGTGGCTCCCCAGGCTCCATACTTGTTGCCCCAAACTGACGG
CTTTTTAGCTCTCCAGATGTCTCGCAACGCACTTAATGCATCCTTTCAAAGTATTCTCTC
GGCAGATGATTGGGTGTCTAATTCGAAAGCGTCTAACTGGCGGGCTTACACCTTAAGACC
GAAAACCAGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCCCAAGAGATTGGCCACAGTGCCCTGTGCTGTACAGCAGGACCCCGTTACCACTCCAT
TCTCAATGTACTAGTTCCTATGCAAACATTTCTTAGCACAACTGATTTTGTGTCTGAGTA
ACTAAGTAGGATACATTTTTTTTTTTTGTAACTCATTCACCTTTGTAAGAAAATGTCGTC
TCACTGAACACCCTTGAAGACTGGCTTGACTGCTATTTCCCATTATTTCGTCTTTCCGTA
AGTCAAAGAAAAATGAAGCTAGAGTGTATGTTCTCAGTTTGCAATCTACAAATGTCTAAC
TCTAGCGTCTTAAGGAGTTCTTTTTCTAGTCTGAGCAAGGGGCTTCTCCATCTAAAATAC
GGACGTATTTCCCCCACACTTTAGAGTTAACTGCATGGGAACATCCCAACAGCGTTGATC
GAAAGGTTTTGAAAATCCCTCCTGATTGTTTGTCAGATGTTGCAATCTTCTGATGGCTAC
TCTCATTTTATTTATCTTATCTTGTTCTCTTGCTGATTATTGGCAGACTCAGTCTCTCTG
TTTTCACAAAGAACTCATGAAGAGGACGATAGGGAAACCCACGTATGCTTTTGAAGCTAG
GGAGTATGTTGTAAGTTTACCTGTGACGGCCAGGTCGTGCGGTCACGGCACAGGCACTAA
CCCCTGTGACGGCACCAAGACTGGGGACCCAGGTGCTCTCTGACCCGGGCATCGGGAAAA
GCCCAGCTGGGTCAAGTCAACCACAGGCTTCTGCATCCGGAAAAGTCGCCTGGAAAAGGG
AACCAAACTTCCCAATAATAATCCAGCTTCCTGAAAATGCCAGGAAGCCGGGCTTGTGTT
TTCCCTCTTTTCGTGGACTGGAACTGCCATCTGAGACAATGTCACTGAGTATGATTTTAC
GGCAGCATGTCACCCATAAAACGCAGCTGCAGAGCATGGTTGCAGACGGCAGTGTGTATG
TATGTAGCAAGCTTACCCACACTCACATCTGAAACAGATGGATCTGCTAAAAAAACAAAA
ACAAAACAAAAACAAAAAACCAGCGAAGCCTGAGCAGGGTCATAGAGCAGTGAAATGACT
TTCCGTGGCCCTTAAACCACCGTGACTGACATATTCGTGTTCGCTGTCCCCTTTCTTTGC
ACTCGAGGTTAGTACCTGTGACGGCGCAATAACACATGGTCCCGCTAGCTCTGTGTGCCC
TCATGTGTTATTGGCACTTGTGGCTCCCCAGGCTCCATACTTGTTGCCCCAAACTGACGG
CTTTTTAGCTCTCCAGATGTCTCGCAACGCACTTAATGCATCCTTTCAAAGTATTCTCTC
GGCAGATGATTGGGTGTCTAATTCGAAAGCGTCTAACTGGCGGGCTTACACCTTAAGACC
GAAAACCAGTTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               65-1392, gnl|bosTau2|chr11 (80512136-80510853)
               

               
               65-1392, gnl|Hg17|chr9 (129761528-129760129)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               65-1392, gnl|bosTau2|chr11 (80512136-80510853)
               

               
               65-1392, gnl|Hg17|chr9 (129761528-129760129)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	65-1392, gnl\|bosTau2\|chr11 (80512136-80510853)
	65-1392, gnl\|Hg17\|chr9 (129761528-129760129)