Non-Coding RNA Search

Ss1.1-Tra1-TCH01H010078.5

Sequence:


               
               AAGAAATGAAGGAATAGAAGACGATGAGCAAAATAGAAAAGCTTGTATGCCATGGAAATC
AAAGTTGAAAAAGACTTGAAGACTGGAGAAAGTACAGTCCTGTCTTCAATACCTCTTCCA
TCAGATGACTTTAAAGGTACAGGGATAAAAGTTTATGATGATGGGCAAAAGTCAGTATAC
GCAGTGAGCTCTAATCACAGTGCAGCATACAACGGCACCGACGGCCTGGCACCAGTTGAA
GTAGAAGATCTTTTAAGACAAGCTTCGGAGAGAAATTCTAAATCCCCGACAGAGTATCAT
GATCCTGTATATGCCAATCCATTCTGCAGACCTACAACTCCACAGAGAGAGAAGGCAACT
CCTGGACCAAACTTTCAAGAAAGGATAAAGATGAAAGCTCGTGGACTGGGTAAGGATATG
AATGGATCCATACACACTATGAACAATGGGCTTTCAGAGGAGAGGGGCAGCAGCGTCAAT
CACATCAGTCCCATTCGGCCCATACCCCACCCCCGATCAATGACTCAACAAGCAGAGGAG
AGGCCCCACAGCCCACAAAAGAGGCAGATGACTCCTTGGGAAGAATCAGATGTGACACAG
GACAAGTGTGCTCCCTCTGCAAAGTCACAACTGAGTCCTGGAGAAGCACCAGTTGGGAAG
TCAGAACGCCAGGGTTCTTCACCAACCTGCCAGGAGGATGAGGAAGACGTCAGATACAAT
ATTGTTCATTCCCTGCCTTCTGACGTGGAGGATACCGAACCTGTGACGATGATTTTCATG
GGGTATCAGCGGGCAGACGATAGTGAGGAAGAAAAGAAGCTTCTAACAGGGTATGACGGG
ATCATCCGTGCTGAGCTGGTTGTGATTGACGACAAGGAGGAGGAGGGTGAAGGAGAAGCT
GAGAAACCATCGTACCATCCCATAGCTCCCCACAGCCAGGTTTTCCAGCCTGCCAACCAA
CGCCGCTTCCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAAATGAAGGAATAGAAGACGATGAGCAAAATAGAAAAGCTTGTATGCCATGGAAATC
AAAGTTGAAAAAGACTTGAAGACTGGAGAAAGTACAGTCCTGTCTTCAATACCTCTTCCA
TCAGATGACTTTAAAGGTACAGGGATAAAAGTTTATGATGATGGGCAAAAGTCAGTATAC
GCAGTGAGCTCTAATCACAGTGCAGCATACAACGGCACCGACGGCCTGGCACCAGTTGAA
GTAGAAGATCTTTTAAGACAAGCTTCGGAGAGAAATTCTAAATCCCCGACAGAGTATCAT
GATCCTGTATATGCCAATCCATTCTGCAGACCTACAACTCCACAGAGAGAGAAGGCAACT
CCTGGACCAAACTTTCAAGAAAGGATAAAGATGAAAGCTCGTGGACTGGGTAAGGATATG
AATGGATCCATACACACTATGAACAATGGGCTTTCAGAGGAGAGGGGCAGCAGCGTCAAT
CACATCAGTCCCATTCGGCCCATACCCCACCCCCGATCAATGACTCAACAAGCAGAGGAG
AGGCCCCACAGCCCACAAAAGAGGCAGATGACTCCTTGGGAAGAATCAGATGTGACACAG
GACAAGTGTGCTCCCTCTGCAAAGTCACAACTGAGTCCTGGAGAAGCACCAGTTGGGAAG
TCAGAACGCCAGGGTTCTTCACCAACCTGCCAGGAGGATGAGGAAGACGTCAGATACAAT
ATTGTTCATTCCCTGCCTTCTGACGTGGAGGATACCGAACCTGTGACGATGATTTTCATG
GGGTATCAGCGGGCAGACGATAGTGAGGAAGAAAAGAAGCTTCTAACAGGGTATGACGGG
ATCATCCGTGCTGAGCTGGTTGTGATTGACGACAAGGAGGAGGAGGGTGAAGGAGAAGCT
GAGAAACCATCGTACCATCCCATAGCTCCCCACAGCCAGGTTTTCCAGCCTGCCAACCAA
CGCCGCTTCCGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|10436982|dbj|BAB14946.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|10436982|dbj|BAB14946.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               37-972, gnl|bosTau2|chr3 (35328398-35329332)
               

               
               37-972, gnl|Hg17|chr1 (99866347-99867284)
               

               
               37-972, gnl|Mm7|chr3 (116698207-116697267)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               37-972, gnl|bosTau2|chr3 (35328398-35329332)
               

               
               37-972, gnl|Hg17|chr1 (99866347-99867284)
               

               
               37-972, gnl|Mm7|chr3 (116698207-116697267)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ssp (0.13552)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)
               

               
               eep (0.122564)

	37-972, gnl\|bosTau2\|chr3 (35328398-35329332)
	37-972, gnl\|Hg17\|chr1 (99866347-99867284)
	37-972, gnl\|Mm7\|chr3 (116698207-116697267)