Ss1.1-Tra1-TCH01H020005.5
|
TGTAACACTCAGATTTTTAAAAAATCAGCCCATCCC------------------------
------------------------------------------------------------
------------------------------------------------CATCCTTTTCTT
GCTAAAAATAAAAAAGCACTTTTAGACATAAAAAATCCTTGTTTTAGCGTCTTCTGTCTT
ACTGTGACATTATAAATGGTTTCATTTCCTGAGAGTTTTATGCACATTGTGATAATTGAG
AAAGATCAAATAGAATTTTTCAGATGGTAAAGTCAAAAGATTTCCAGTTATAATCCTAAG
ATGGTCTTTCACAGTGTCTGTTTTACACTCCACGTGACAAACGTATTTACAAACACACAT
TTTTTACAAACACATTTTTTGCCACTCGGTGTGAAGAACAGTGCTTCTAAGAACAATGGT
GAGACTCACCACATCAGATTGTCCTTTTTGCATTGTCTTATGTTGCATGATGGGAAGGTT
TAGAAATAAACACACCCCTGGACACAGCAGGGTTCAGCTAAGACATCTACTATTTTTAAT
ACATTTTGCTATTTTAGGCTTGTCATGTTATCTTGGGGTGAGAAAAGCCATCCATTTGCC
TCAGTCTGAGGTCAGATATAGCCCTTAGTTCTCCGTAATGGACTTGATGATGTTATGGTT
TTAAAATAACGAAAATGAACATTTCTTGTCTTCAGGGTTATGGTGGCAGCCTGCTATCAT
TTTTATGCTATTAATCACACTCCTCTTTTTTAAGAAACCCCACCCCGTGCACCGGAAGTT
AAATGCCATCATTTGATAACACCTAAGTAATACTTGGCTGAAATCCTATAGCGTTTTGCT
TTGTTCTTAGCTTTCTGTGACAGTGTTAAGAGGAAAGCAAGTCGTGTAGGGGTTGGGCTG
AAAGAGGAGAAAATGGAGCAGTTGGAGTCCTCCAGGGACAGAGTAAGAGATTGTTAATAC
ATTAGTGGTAGGAGGGCTTGTGCAGAAAATACGACTGTACAGTTAAATGGGGCTATTAAA
AGCACGGCTGCATCAATTCATTAAATGACAGTTGTGATTTCTTTGTAAGCCCCTTTCCGT
CTTTCTCCTCCTGGGACTCGGGAGCGCAAAGGCTGCCAAGGAAGCGGCACGGTCACTTAG
ACTCTGGCATCCTCACTCCCTGCTTTGGAGGCTGATTGTCTGTGTGGAAGGAAACCCCAC
CCTGTCAAGTACCTTTTGTCATCTGTAGGCACTGGGGATGAAAGCAGGATATCCTAGGGG
ACGATCTGGTATTGCATCCCAAAGAACTCCTGGCTGTGTAAGCAGGTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGTAACACTCAGATTTTTAAAAAATCAGCCCATCCC------------------------
------------------------------------------------------------
------------------------------------------------CATCCTTTTCTT
GCTAAAAATAAAAAAGCACTTTTAGACATAAAAAATCCTTGTTTTAGCGTCTTCTGTCTT
ACTGTGACATTATAAATGGTTTCATTTCCTGAGAGTTTTATGCACATTGTGATAATTGAG
AAAGATCAAATAGAATTTTTCAGATGGTAAAGTCAAAAGATTTCCAGTTATAATCCTAAG
ATGGTCTTTCACAGTGTCTGTTTTACACTCCACGTGACAAACGTATTTACAAACACACAT
TTTTTACAAACACATTTTTTGCCACTCGGTGTGAAGAACAGTGCTTCTAAGAACAATGGT
GAGACTCACCACATCAGATTGTCCTTTTTGCATTGTCTTATGTTGCATGATGGGAAGGTT
TAGAAATAAACACACCCCTGGACACAGCAGGGTTCAGCTAAGACATCTACTATTTTTAAT
ACATTTTGCTATTTTAGGCTTGTCATGTTATCTTGGGGTGAGAAAAGCCATCCATTTGCC
TCAGTCTGAGGTCAGATATAGCCCTTAGTTCTCCGTAATGGACTTGATGATGTTATGGTT
TTAAAATAACGAAAATGAACATTTCTTGTCTTCAGGGTTATGGTGGCAGCCTGCTATCAT
TTTTATGCTATTAATCACACTCCTCTTTTTTAAGAAACCCCACCCCGTGCACCGGAAGTT
AAATGCCATCATTTGATAACACCTAAGTAATACTTGGCTGAAATCCTATAGCGTTTTGCT
TTGTTCTTAGCTTTCTGTGACAGTGTTAAGAGGAAAGCAAGTCGTGTAGGGGTTGGGCTG
AAAGAGGAGAAAATGGAGCAGTTGGAGTCCTCCAGGGACAGAGTAAGAGATTGTTAATAC
ATTAGTGGTAGGAGGGCTTGTGCAGAAAATACGACTGTACAGTTAAATGGGGCTATTAAA
AGCACGGCTGCATCAATTCATTAAATGACAGTTGTGATTTCTTTGTAAGCCCCTTTCCGT
CTTTCTCCTCCTGGGACTCGGGAGCGCAAAGGCTGCCAAGGAAGCGGCACGGTCACTTAG
ACTCTGGCATCCTCACTCCCTGCTTTGGAGGCTGATTGTCTGTGTGGAAGGAAACCCCAC
CCTGTCAAGTACCTTTTGTCATCTGTAGGCACTGGGGATGAAAGCAGGATATCCTAGGGG
ACGATCTGGTATTGCATCCCAAAGAACTCCTGGCTGTGTAAGCAGGTT
|
|
35-607, gnl|bosTau2|chr2 (60009812-60010360) |
|
35-607, gnl|canFam2|chr13 (20463111-20463578) |
|
35-607, gnl|dasNov1|scaffold_368 (20929-20456) |
|
35-607, gnl|echTel1|scaffold_320808 (6274-6749) |
|
35-607, gnl|hg17|chr8 (119163501-119163970) |
|
35-607, gnl|Hg17|chr8 (119164046-119163500) |
|
35-607, gnl|loxAfr1|scaffold_30206 (14503-14031) |
|
35-607, gnl|mm7|chr15 (53376707-53377159) |
|
35-607, gnl|Mm7|chr15 (53377232-53376708) |
|
35-607, gnl|monDom2|scaffold_3 (38361041-38360531) |
|
35-607, gnl|oryCun1|scaffold_200661 (79430-78962) |
|
35-607, gnl|panTro1|chr7 (121893129-121893598) |
|
35-607, gnl|rheMac2|chr8 (120636839-120637308) |
|
35-607, gnl|rn3|chr7 (89663841-89664293) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
35-607, gnl|bosTau2|chr2 (60009812-60010360) |
|
35-607, gnl|canFam2|chr13 (20463111-20463578) |
|
35-607, gnl|dasNov1|scaffold_368 (20929-20456) |
|
35-607, gnl|echTel1|scaffold_320808 (6274-6749) |
|
35-607, gnl|hg17|chr8 (119163501-119163970) |
|
35-607, gnl|Hg17|chr8 (119164046-119163500) |
|
35-607, gnl|loxAfr1|scaffold_30206 (14503-14031) |
|
35-607, gnl|mm7|chr15 (53376707-53377159) |
|
35-607, gnl|Mm7|chr15 (53377232-53376708) |
|
35-607, gnl|monDom2|scaffold_3 (38361041-38360531) |
|
35-607, gnl|oryCun1|scaffold_200661 (79430-78962) |
|
35-607, gnl|panTro1|chr7 (121893129-121893598) |
|
35-607, gnl|rheMac2|chr8 (120636839-120637308) |
|
35-607, gnl|rn3|chr7 (89663841-89664293) |
