Non-Coding RNA Search

Ss1.1-Tra1-TCH01H050002.5

Sequence:


               
               TGAGGGTGATGCAAAGGACTTTTGTCGGCAGTTGTGAAAATTGGTGGGGACACTGCTGAT
CATCGCACTATGCATATAGACCAGTTCTGCGTGCCTGAAGCAAATTTCAGCATTTCTGAC
GGCCTGTGTATCTGCTTTTTGGATTCGCCTCTGAACATTTTCATGACTCACTTGTTAATT
AGTGAGTTAAACAGAACTGCCTGTATAAGCACTGGAATGTTCACCACAGAGGCTTGAAAA
CTAAAATCACAGAGGTTTGGTGAACAGACACGCAAGCGTCATTTGAGCAAATGGTTCACT
TGACCACATTCCAAGAGAGCAGGACCAGAGGAGAGCCTGTGGGGATCCAGGAAGGGTAGG
GCGTGGGTGTTTTGCTAAGCAGTGTGCAGCACGGCGAGCAAGTGCCCTTAAGCTCACAGA
TACCTTTATTATGAATAAACCTCTCACCAAATATCTTGGCATCTTCCACACATCTCTGGG
TTCGCCTTCGTATGTTTTCGCCATCAGCTACAGCTCTCTGGTACCTGACCTGAGCATTGA
AAGCAAAGCCAAGATGACAAGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGGGTGATGCAAAGGACTTTTGTCGGCAGTTGTGAAAATTGGTGGGGACACTGCTGAT
CATCGCACTATGCATATAGACCAGTTCTGCGTGCCTGAAGCAAATTTCAGCATTTCTGAC
GGCCTGTGTATCTGCTTTTTGGATTCGCCTCTGAACATTTTCATGACTCACTTGTTAATT
AGTGAGTTAAACAGAACTGCCTGTATAAGCACTGGAATGTTCACCACAGAGGCTTGAAAA
CTAAAATCACAGAGGTTTGGTGAACAGACACGCAAGCGTCATTTGAGCAAATGGTTCACT
TGACCACATTCCAAGAGAGCAGGACCAGAGGAGAGCCTGTGGGGATCCAGGAAGGGTAGG
GCGTGGGTGTTTTGCTAAGCAGTGTGCAGCACGGCGAGCAAGTGCCCTTAAGCTCACAGA
TACCTTTATTATGAATAAACCTCTCACCAAATATCTTGGCATCTTCCACACATCTCTGGG
TTCGCCTTCGTATGTTTTCGCCATCAGCTACAGCTCTCTGGTACCTGACCTGAGCATTGA
AAGCAAAGCCAAGATGACAAGAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-564, gnl|bosTau2|chr7 (42203383-42203943)
               

               
               1-564, gnl|Mm7|chr18 (62107806-62108308)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-564, gnl|bosTau2|chr7 (42203383-42203943)
               

               
               1-564, gnl|Mm7|chr18 (62107806-62108308)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               hlv (0.278513)
               

               
               che (0.136314)
               

               
               pla (0.133672)
               

               
               ova (0.129132)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.278513)
               

               
               che (0.136314)
               

               
               pla (0.133672)
               

               
               ova (0.129132)

	1-564, gnl\|bosTau2\|chr7 (42203383-42203943)
	1-564, gnl\|Mm7\|chr18 (62107806-62108308)