Non-Coding RNA Search

Ss1.1-Tra1-TCH01H050095.5

Sequence:


               
               GACCTTCCTGCGAGTGCGAGCCAACCGGCAGACCCGACTGAATGCTCGGATTGGGAAAAT
GAAACGGAGGAAGCAGGATGAAGGGCAGAGGGAAGGCTCCTGCATGGCGGAGGAGGATGC
CGTGGACATCGAGCATGAGAACAGCAACCGCTTTGAGGAGTATGAGTGGTGCGGGCAGAA
GCGGATACGGGCCACCACGCTCCTGGAAGGTGGTTTCCGAGGCTCTGGCTTCGTCATGTG
CAGCGGCAAAGAGAATCCGGACAGCGACGCTGACTTGGATGTGGATGGGGACGACACTCT
GGAGTACGGGAAGCCACAATACACGGAGGCCGACGTCATCCCCTGCACAGGCGAGGAGCC
TGGCGAAGCCAAGGAGAGAGAGGCACTCCGGGGTGCAGTCCTAAATGGCGGCCCTCCCAG
CACACGCATCACGCCTGAGTTCTCTAAGTGGGCCAGTGACGAGATGCCATCTACCAGCAA
CGGTGAGAGCAGCAAGCAGGAGGCCATGCAGAAGACCTGCAAGAACAGCGACATCGAGAA
AATCACCGAAGATTCAGCTGTGACCACATTTGAGGCCCTGAAGGCTCGGGTCAGGGAACT
TGAACGGCAGCTATCCCGTGGGGACCGTTACAAATGCCTCATCTGCATGGACTCCTATTC
GATGCCCCTAACGTCCATCCAGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACCTTCCTGCGAGTGCGAGCCAACCGGCAGACCCGACTGAATGCTCGGATTGGGAAAAT
GAAACGGAGGAAGCAGGATGAAGGGCAGAGGGAAGGCTCCTGCATGGCGGAGGAGGATGC
CGTGGACATCGAGCATGAGAACAGCAACCGCTTTGAGGAGTATGAGTGGTGCGGGCAGAA
GCGGATACGGGCCACCACGCTCCTGGAAGGTGGTTTCCGAGGCTCTGGCTTCGTCATGTG
CAGCGGCAAAGAGAATCCGGACAGCGACGCTGACTTGGATGTGGATGGGGACGACACTCT
GGAGTACGGGAAGCCACAATACACGGAGGCCGACGTCATCCCCTGCACAGGCGAGGAGCC
TGGCGAAGCCAAGGAGAGAGAGGCACTCCGGGGTGCAGTCCTAAATGGCGGCCCTCCCAG
CACACGCATCACGCCTGAGTTCTCTAAGTGGGCCAGTGACGAGATGCCATCTACCAGCAA
CGGTGAGAGCAGCAAGCAGGAGGCCATGCAGAAGACCTGCAAGAACAGCGACATCGAGAA
AATCACCGAAGATTCAGCTGTGACCACATTTGAGGCCCTGAAGGCTCGGGTCAGGGAACT
TGAACGGCAGCTATCCCGTGGGGACCGTTACAAATGCCTCATCTGCATGGACTCCTATTC
GATGCCCCTAACGTCCATCCAGTG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               Q5VTB7_HUMAN

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               Q5VTB7_HUMAN

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               86-222, gnl|bosTau2|chr3 (70546226-70546090)
               

               
               86-222, gnl|Hg17|chr1 (44770792-44770928)
               

               
               86-222, gnl|Mm7|chr4 (116661953-116661817)
               


               
               541-650, gnl|bosTau2|chr3 (70533016-70532907)
               

               
               541-650, gnl|Hg17|chr1 (44784426-44784535)
               

               
               541-650, gnl|Mm7|chr4 (116649794-116649685)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               86-222, gnl|bosTau2|chr3 (70546226-70546090)
               

               
               86-222, gnl|Hg17|chr1 (44770792-44770928)
               

               
               86-222, gnl|Mm7|chr4 (116661953-116661817)
               


               
               541-650, gnl|bosTau2|chr3 (70533016-70532907)
               

               
               541-650, gnl|Hg17|chr1 (44784426-44784535)
               

               
               541-650, gnl|Mm7|chr4 (116649794-116649685)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ill (0.175593)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)

	86-222, gnl\|bosTau2\|chr3 (70546226-70546090)
	86-222, gnl\|Hg17\|chr1 (44770792-44770928)
	86-222, gnl\|Mm7\|chr4 (116661953-116661817)

	541-650, gnl\|bosTau2\|chr3 (70533016-70532907)
	541-650, gnl\|Hg17\|chr1 (44784426-44784535)
	541-650, gnl\|Mm7\|chr4 (116649794-116649685)