Ss1.1-Tra1-TCH01H090086.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCGGCGCCCCGGGTGCGAGAGGCTGGTCCAGCCGCTTGGGTTAGCGAGTCGCTCTGCTG TCCGGCTCTTGTCTGAGGACCCCGAAACTACCGTTCCCCGGCCAGGCAGCGTGGGCGCCA TGAACGAAGCAGGACTGAATTCGGAGAAGGTAGCTGCTCTGCTTCAGAAACTGAATTCCG ACCCCCAGTTCGTACTGGCCCAGAATGTCGGCACCACCCACGATCTGCTGGACATCTGTC TGAAGAGGGCCACGGTCCAGGGTACTCAGCATGTGTTCCAGCACACGGTGCATCAGGAGG GCAAGCCAGTCACCAACCAGAAGAGCTCAGGACGATGCTGGATCTTCTCCTGTCTGAATG TTATGAGACTTCCATTCATGAGAAAATTAAATATTGAAGAATTTGAGTTTAGTCAGTCTT ACCTCTTTTTCTGGGACAAGGTTGAACGCTGTTATTTCTTCTTAAATGCTTTTGTGGATA CAGCCCAGAAAAAGGAGCCTGAGGATGGTAGGCTGGTGCAGTTTCTGCTTATGAATCCTG CAAATGATGGTGGACAATGGGATATGCTTGTCAATATTGTTGAAAAATATGGTGTCGTCC CTAAGAAGTGCTTCCCTGAATCTCATACGACAGAGGCAACCAGAAGAATGAATGATATTC TGAATCACAAGATGAGAGAATTCTGTATACGACTGCGGAACCTGGTACACAGTGGTGCAA CCAAAGTCGAAATCTCAGCCACACAGGACATCATGATGGAGGAGATATTCAGAGTGGTGT GCATCTGTCTGGGTAATCCACCGGAGACATTCACCTGGGAATATCGAGACAAAGACAAAA ACTATCAGAAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCGGCGCCCCGGGTGCGAGAGGCTGGTCCAGCCGCTTGGGTTAGCGAGTCGCTCTGCTG TCCGGCTCTTGTCTGAGGACCCCGAAACTACCGTTCCCCGGCCAGGCAGCGTGGGCGCCA TGAACGAAGCAGGACTGAATTCGGAGAAGGTAGCTGCTCTGCTTCAGAAACTGAATTCCG ACCCCCAGTTCGTACTGGCCCAGAATGTCGGCACCACCCACGATCTGCTGGACATCTGTC TGAAGAGGGCCACGGTCCAGGGTACTCAGCATGTGTTCCAGCACACGGTGCATCAGGAGG GCAAGCCAGTCACCAACCAGAAGAGCTCAGGACGATGCTGGATCTTCTCCTGTCTGAATG TTATGAGACTTCCATTCATGAGAAAATTAAATATTGAAGAATTTGAGTTTAGTCAGTCTT ACCTCTTTTTCTGGGACAAGGTTGAACGCTGTTATTTCTTCTTAAATGCTTTTGTGGATA CAGCCCAGAAAAAGGAGCCTGAGGATGGTAGGCTGGTGCAGTTTCTGCTTATGAATCCTG CAAATGATGGTGGACAATGGGATATGCTTGTCAATATTGTTGAAAAATATGGTGTCGTCC CTAAGAAGTGCTTCCCTGAATCTCATACGACAGAGGCAACCAGAAGAATGAATGATATTC TGAATCACAAGATGAGAGAATTCTGTATACGACTGCGGAACCTGGTACACAGTGGTGCAA CCAAAGTCGAAATCTCAGCCACACAGGACATCATGATGGAGGAGATATTCAGAGTGGTGT GCATCTGTCTGGGTAATCCACCGGAGACATTCACCTGGGAATATCGAGACAAAGACAAAA ACTATCAGAAGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 4-852, gnl|bosTau2|chr6 (64843411-64844260) | |
| 4-852, gnl|Hg17|chr17 (25643080-25625254) | |
| 4-852, gnl|Mm7|chr11 (77027338-77047477) | |
| 128-331, gnl|bosTau2|chr19 (15809403-15809200) | |
| 128-331, gnl|canFam2|chr9 (47644145-47644378) | |
| 128-331, gnl|danRer3|chr15 (34923981-34924205) | |
| 128-331, gnl|dasNov1|scaffold_4661 (17686-17918) | |
| 128-331, gnl|echTel1|scaffold_288019 (163956-163724) | |
| 128-331, gnl|fr1|chrUn (168544020-168543802) | |
| 128-331, gnl|galGal2|chr19 (5818473-5818697) | |
| 128-331, gnl|hg17|chr17 (25642441-25642673) | |
| 128-331, gnl|Hg17|chr17 (25642657-25642454) | |
| 128-331, gnl|loxAfr1|scaffold_10962 (23326-23094) | |
| 128-331, gnl|mm7|chr11 (77028030-77027798) | |
| 128-331, gnl|Mm7|chr11 (77027812-77028015) | |
| 128-331, gnl|monDom2|scaffold_86 (710425-710669) | |
| 128-331, gnl|oryCun1|scaffold_82262 (1334-1563) | |
| 128-331, gnl|panTro1|chr19 (29006905-29007137) | |
| 128-331, gnl|rheMac2|chr16 (25530968-25531201) | |
| 128-331, gnl|rn3|chr10 (67251282-67251514) | |
| 128-331, gnl|tetNig1|chrUn_random (15071507-15071288) | |
| 128-331, gnl|xenTro1|scaffold_1079 (300350-300129) | |
| 439-582, gnl|bosTau2|chr19 (15804212-15804069) | |
| 439-582, gnl|canFam2|chr9 (47640464-47640673) | |
| 439-582, gnl|danRer3|chr15 (34921650-34921841) | |
| 439-582, gnl|dasNov1|scaffold_4661 (15588-15795) | |
| 439-582, gnl|echTel1|scaffold_288019 (167768-167565) | |
| 439-582, gnl|fr1|chrUn (168545813-168545599) | |
| 439-582, gnl|galGal2|chr19 (5817009-5817172) | |
| 439-582, gnl|hg17|chr17 (25638944-25639154) | |
| 439-582, gnl|Hg17|chr17 (25639093-25638950) | |
| 439-582, gnl|mm7|chr11 (77032768-77032560) | |
| 439-582, gnl|Mm7|chr11 (77032617-77032760) | |
| 439-582, gnl|monDom2|scaffold_86 (705451-705646) | |
| 439-582, gnl|oryCun1|scaffold_204493 (76795-76587) | |
| 439-582, gnl|panTro1|chr19 (29003428-29003638) | |
| 439-582, gnl|rheMac2|chr16 (25525908-25526118) | |
| 439-582, gnl|rn3|chr10 (67246878-67247086) | |
| 439-582, gnl|tetNig1|chrUn_random (15072932-15072754) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-852, gnl|bosTau2|chr6 (64843411-64844260) | |
| 4-852, gnl|Hg17|chr17 (25643080-25625254) | |
| 4-852, gnl|Mm7|chr11 (77027338-77047477) | |
| 128-331, gnl|bosTau2|chr19 (15809403-15809200) | |
| 128-331, gnl|canFam2|chr9 (47644145-47644378) | |
| 128-331, gnl|danRer3|chr15 (34923981-34924205) | |
| 128-331, gnl|dasNov1|scaffold_4661 (17686-17918) | |
| 128-331, gnl|echTel1|scaffold_288019 (163956-163724) | |
| 128-331, gnl|fr1|chrUn (168544020-168543802) | |
| 128-331, gnl|galGal2|chr19 (5818473-5818697) | |
| 128-331, gnl|hg17|chr17 (25642441-25642673) | |
| 128-331, gnl|Hg17|chr17 (25642657-25642454) | |
| 128-331, gnl|loxAfr1|scaffold_10962 (23326-23094) | |
| 128-331, gnl|mm7|chr11 (77028030-77027798) | |
| 128-331, gnl|Mm7|chr11 (77027812-77028015) | |
| 128-331, gnl|monDom2|scaffold_86 (710425-710669) | |
| 128-331, gnl|oryCun1|scaffold_82262 (1334-1563) | |
| 128-331, gnl|panTro1|chr19 (29006905-29007137) | |
| 128-331, gnl|rheMac2|chr16 (25530968-25531201) | |
| 128-331, gnl|rn3|chr10 (67251282-67251514) | |
| 128-331, gnl|tetNig1|chrUn_random (15071507-15071288) | |
| 128-331, gnl|xenTro1|scaffold_1079 (300350-300129) | |
| 439-582, gnl|bosTau2|chr19 (15804212-15804069) | |
| 439-582, gnl|canFam2|chr9 (47640464-47640673) | |
| 439-582, gnl|danRer3|chr15 (34921650-34921841) | |
| 439-582, gnl|dasNov1|scaffold_4661 (15588-15795) | |
| 439-582, gnl|echTel1|scaffold_288019 (167768-167565) | |
| 439-582, gnl|fr1|chrUn (168545813-168545599) | |
| 439-582, gnl|galGal2|chr19 (5817009-5817172) | |
| 439-582, gnl|hg17|chr17 (25638944-25639154) | |
| 439-582, gnl|Hg17|chr17 (25639093-25638950) | |
| 439-582, gnl|mm7|chr11 (77032768-77032560) | |
| 439-582, gnl|Mm7|chr11 (77032617-77032760) | |
| 439-582, gnl|monDom2|scaffold_86 (705451-705646) | |
| 439-582, gnl|oryCun1|scaffold_204493 (76795-76587) | |
| 439-582, gnl|panTro1|chr19 (29003428-29003638) | |
| 439-582, gnl|rheMac2|chr16 (25525908-25526118) | |
| 439-582, gnl|rn3|chr10 (67246878-67247086) | |
| 439-582, gnl|tetNig1|chrUn_random (15072932-15072754) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) | |
| ebs (0.118301) |