Ss1.1-Tra1-TCH01H090094.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTTAACCAAGCTGGTGGAGGTGGGCAGGGTGAAGTGCTCGCGGTACTGGCCAGAGGACT CGGACATGTACGGGGACATCAAGATCACGCTGGTGAAGACGGAGACTCTAGCCGAGTATG TTGTGCGCAGCTTTGCCCTGGAGCGGAGAGGCTACTCTGCCCGCCACGAGGTCCGCCAGT TCCACTTCACGGCGTGGCCGGAGCACGGCGTCCCCTACCATGCCACAGGGCTGCTGGCCT TCATTCGGCGCGTGAAGGCCTCCACCCCTCCAGATGCTGGGCCCATTGTCATCCACTGCA GCGCGGGCACTGGCCGCACAGGTTGCTACATTGTCCTGGATGTGATGCTGGACATGGCGG ACTGTGAGGGTGTCGTGGACATTTACAACTGTGTGAAGACCCTCTGCTCCCGGCGCGTCA ACATGATCCAGACTGAGGAGCAGTACGTCTTCATCCACGATGCAATCCTGGAGGCCTGCC TGTGTGGGGAGACCACCATCCCTGTCAGTGAATTCAAGGCTACCTACAAAGAGATGATCC GCATTGACCCTCAGAGTAATTCTTCCCAGCTGCGGGAGGAGTTCCAGACATTGAACTCGG TCACACCACCGCTGGACGTGGAGGAGTGCAGCATCGCCTTGCTGCCCCGGAACCGGGACA AGAACCGCAGCATGGACGTCCTGCCGCCTGACCGCTGCCTGCCCTTCCTCATCTCCACTG ACGGGGACCCCAACAACTACATCAACGCGGCCCTGACTGATAGCTACACACGGAGCGCAG CCTTCATCGTGACCCTGCACCCGCTGCAGAGCACCATACCCGACTTCTGGCGGCTGGTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTTAACCAAGCTGGTGGAGGTGGGCAGGGTGAAGTGCTCGCGGTACTGGCCAGAGGACT CGGACATGTACGGGGACATCAAGATCACGCTGGTGAAGACGGAGACTCTAGCCGAGTATG TTGTGCGCAGCTTTGCCCTGGAGCGGAGAGGCTACTCTGCCCGCCACGAGGTCCGCCAGT TCCACTTCACGGCGTGGCCGGAGCACGGCGTCCCCTACCATGCCACAGGGCTGCTGGCCT TCATTCGGCGCGTGAAGGCCTCCACCCCTCCAGATGCTGGGCCCATTGTCATCCACTGCA GCGCGGGCACTGGCCGCACAGGTTGCTACATTGTCCTGGATGTGATGCTGGACATGGCGG ACTGTGAGGGTGTCGTGGACATTTACAACTGTGTGAAGACCCTCTGCTCCCGGCGCGTCA ACATGATCCAGACTGAGGAGCAGTACGTCTTCATCCACGATGCAATCCTGGAGGCCTGCC TGTGTGGGGAGACCACCATCCCTGTCAGTGAATTCAAGGCTACCTACAAAGAGATGATCC GCATTGACCCTCAGAGTAATTCTTCCCAGCTGCGGGAGGAGTTCCAGACATTGAACTCGG TCACACCACCGCTGGACGTGGAGGAGTGCAGCATCGCCTTGCTGCCCCGGAACCGGGACA AGAACCGCAGCATGGACGTCCTGCCGCCTGACCGCTGCCTGCCCTTCCTCATCTCCACTG ACGGGGACCCCAACAACTACATCAACGCGGCCCTGACTGATAGCTACACACGGAGCGCAG CCTTCATCGTGACCCTGCACCCGCTGCAGAGCACCATACCCGACTTCTGGCGGCTGGTCT |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 146-313, gnl|bosTau2|chr2 (77018147-77017980) | |
| 146-313, gnl|canFam2|chr2 (74187341-74187159) | |
| 146-313, gnl|danRer3|chr16 (47316040-47315863) | |
| 146-313, gnl|dasNov1|scaffold_26693 (12835-12647) | |
| 146-313, gnl|echTel1|scaffold_268459 (7721-7525) | |
| 146-313, gnl|fr1|chrUn (42880706-42880873) | |
| 146-313, gnl|galGal2|chr23 (2383866-2384057) | |
| 146-313, gnl|hg17|chr1 (29459660-29459855) | |
| 146-313, gnl|Hg17|chr1 (29459679-29459847) | |
| 146-313, gnl|loxAfr1|scaffold_66067 (988-792) | |
| 146-313, gnl|mm7|chr4 (130993618-130993423) | |
| 146-313, gnl|Mm7|chr4 (130993597-130993429) | |
| 146-313, gnl|monDom2|scaffold_43 (19670-19854) | |
| 146-313, gnl|oryCun1|scaffold_80883 (4568-4763) | |
| 146-313, gnl|panTro1|chr1 (30053588-30053783) | |
| 146-313, gnl|rheMac2|chr1 (32056028-32056222) | |
| 146-313, gnl|rn3|chr5 (150631926-150631731) | |
| 146-313, gnl|tetNig1|chr8 (5690421-5690262) | |
| 146-313, gnl|xenTro1|scaffold_985 (97342-97516) | |
| 436-587, gnl|bosTau2|chr2 (77015181-77015030) | |
| 436-587, gnl|canFam2|chr2 (74184178-74184002) | |
| 436-587, gnl|danRer3|chr16 (47311396-47311227) | |
| 436-587, gnl|dasNov1|scaffold_164078 (944-1117) | |
| 436-587, gnl|echTel1|scaffold_268459 (5009-4833) | |
| 436-587, gnl|fr1|chrUn (42882226-42882407) | |
| 436-587, gnl|galGal2|chr23 (2385533-2385704) | |
| 436-587, gnl|hg17|chr1 (29463113-29463289) | |
| 436-587, gnl|Hg17|chr1 (29463128-29463279) | |
| 436-587, gnl|loxAfr1|scaffold_2051 (23273-23106) | |
| 436-587, gnl|mm7|chr4 (130990792-130990616) | |
| 436-587, gnl|Mm7|chr4 (130990775-130990624) | |
| 436-587, gnl|monDom2|scaffold_43 (20691-20868) | |
| 436-587, gnl|oryCun1|scaffold_80883 (7940-8115) | |
| 436-587, gnl|panTro1|chr1 (30057039-30057215) | |
| 436-587, gnl|rheMac2|chr1 (32059462-32059638) | |
| 436-587, gnl|rn3|chr5 (150629430-150629254) | |
| 436-587, gnl|tetNig1|chr8 (5688945-5688771) | |
| 436-587, gnl|xenTro1|scaffold_985 (97842-98002) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 146-313, gnl|bosTau2|chr2 (77018147-77017980) | |
| 146-313, gnl|canFam2|chr2 (74187341-74187159) | |
| 146-313, gnl|danRer3|chr16 (47316040-47315863) | |
| 146-313, gnl|dasNov1|scaffold_26693 (12835-12647) | |
| 146-313, gnl|echTel1|scaffold_268459 (7721-7525) | |
| 146-313, gnl|fr1|chrUn (42880706-42880873) | |
| 146-313, gnl|galGal2|chr23 (2383866-2384057) | |
| 146-313, gnl|hg17|chr1 (29459660-29459855) | |
| 146-313, gnl|Hg17|chr1 (29459679-29459847) | |
| 146-313, gnl|loxAfr1|scaffold_66067 (988-792) | |
| 146-313, gnl|mm7|chr4 (130993618-130993423) | |
| 146-313, gnl|Mm7|chr4 (130993597-130993429) | |
| 146-313, gnl|monDom2|scaffold_43 (19670-19854) | |
| 146-313, gnl|oryCun1|scaffold_80883 (4568-4763) | |
| 146-313, gnl|panTro1|chr1 (30053588-30053783) | |
| 146-313, gnl|rheMac2|chr1 (32056028-32056222) | |
| 146-313, gnl|rn3|chr5 (150631926-150631731) | |
| 146-313, gnl|tetNig1|chr8 (5690421-5690262) | |
| 146-313, gnl|xenTro1|scaffold_985 (97342-97516) | |
| 436-587, gnl|bosTau2|chr2 (77015181-77015030) | |
| 436-587, gnl|canFam2|chr2 (74184178-74184002) | |
| 436-587, gnl|danRer3|chr16 (47311396-47311227) | |
| 436-587, gnl|dasNov1|scaffold_164078 (944-1117) | |
| 436-587, gnl|echTel1|scaffold_268459 (5009-4833) | |
| 436-587, gnl|fr1|chrUn (42882226-42882407) | |
| 436-587, gnl|galGal2|chr23 (2385533-2385704) | |
| 436-587, gnl|hg17|chr1 (29463113-29463289) | |
| 436-587, gnl|Hg17|chr1 (29463128-29463279) | |
| 436-587, gnl|loxAfr1|scaffold_2051 (23273-23106) | |
| 436-587, gnl|mm7|chr4 (130990792-130990616) | |
| 436-587, gnl|Mm7|chr4 (130990775-130990624) | |
| 436-587, gnl|monDom2|scaffold_43 (20691-20868) | |
| 436-587, gnl|oryCun1|scaffold_80883 (7940-8115) | |
| 436-587, gnl|panTro1|chr1 (30057039-30057215) | |
| 436-587, gnl|rheMac2|chr1 (32059462-32059638) | |
| 436-587, gnl|rn3|chr5 (150629430-150629254) | |
| 436-587, gnl|tetNig1|chr8 (5688945-5688771) | |
| 436-587, gnl|xenTro1|scaffold_985 (97842-98002) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.132802) |