Ss1.1-Tra1-TCH01H110031.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGCAGATACAGCGGCGATGGCGGTAACCGCGACTCCGGGAAGCGGTGGCCCCAGCGTGG ACGCCCGGCTGGACCAGGAGACGACCCGGTGGCTGCGATGGGACAAGAATCCTTTAACTT GGGAGTCAGTGAAACGACTACTTGAAGAAGATAATAAAGAAGAACTGCAGAAATGTTTTG GGGCTCGAATGGAGTTCGGGACAGCTGGTCTCCGAGCTATGATGGGAGCAGGAATCTCTC GTATGAATGACTTGACCATCATCCAGACTACACAGGGACTTTGCAGATACCTGGAAAAAC AATTCAGTGACCTCAAGCAAAGAGGTGTTGTGATCAGCTTTGATGCTCGAGCCCATACAG CAAGTGGAGGCAGCAGCAGAAGGTTTGCCCGGCTTGCTGCAACCGCGTTTATCAGCCAGG GGATTCCCGTGTACCTCTTTTCTGATATAACCCCGACCCCCTTTGTGCCCTACACAGTAT CACACTTGAAACTTTGTGCTGGAATCATGATAACTGCCTCTCACAACCCAAAGCAGGATA ATGGTTACAAGGTCTACTGGGATAACGGGGCTCAGATCATCTCTCCTCATGATAAAGGGA TTGCCCAGGCTATTGAAGAAAACCTAGAGCCATGGCCTCAGGCGTGGGAAGATTCTATAA TCAATGACAGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGCAGATACAGCGGCGATGGCGGTAACCGCGACTCCGGGAAGCGGTGGCCCCAGCGTGG ACGCCCGGCTGGACCAGGAGACGACCCGGTGGCTGCGATGGGACAAGAATCCTTTAACTT GGGAGTCAGTGAAACGACTACTTGAAGAAGATAATAAAGAAGAACTGCAGAAATGTTTTG GGGCTCGAATGGAGTTCGGGACAGCTGGTCTCCGAGCTATGATGGGAGCAGGAATCTCTC GTATGAATGACTTGACCATCATCCAGACTACACAGGGACTTTGCAGATACCTGGAAAAAC AATTCAGTGACCTCAAGCAAAGAGGTGTTGTGATCAGCTTTGATGCTCGAGCCCATACAG CAAGTGGAGGCAGCAGCAGAAGGTTTGCCCGGCTTGCTGCAACCGCGTTTATCAGCCAGG GGATTCCCGTGTACCTCTTTTCTGATATAACCCCGACCCCCTTTGTGCCCTACACAGTAT CACACTTGAAACTTTGTGCTGGAATCATGATAACTGCCTCTCACAACCCAAAGCAGGATA ATGGTTACAAGGTCTACTGGGATAACGGGGCTCAGATCATCTCTCCTCATGATAAAGGGA TTGCCCAGGCTATTGAAGAAAACCTAGAGCCATGGCCTCAGGCGTGGGAAGATTCTATAA TCAATGACAGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 106-279, gnl|bosTau2|chr6 (29669952-29669779) | |
| 106-279, gnl|canFam2|chr3 (77203775-77203592) | |
| 106-279, gnl|danRer3|chr15 (7882340-7882524) | |
| 106-279, gnl|dasNov1|scaffold_240647 (148-331) | |
| 106-279, gnl|echTel1|scaffold_289389 (50171-50354) | |
| 106-279, gnl|fr1|chrUn (236893865-236894041) | |
| 106-279, gnl|galGal2|chr4 (70031568-70031385) | |
| 106-279, gnl|hg17|chr4 (37654139-37654322) | |
| 106-279, gnl|Hg17|chr4 (37654150-37654323) | |
| 106-279, gnl|loxAfr1|scaffold_33163 (22236-22419) | |
| 106-279, gnl|mm7|chr5 (63450864-63451047) | |
| 106-279, gnl|Mm7|chr5 (63450875-63451048) | |
| 106-279, gnl|monDom2|scaffold_26 (2685477-2685660) | |
| 106-279, gnl|oryCun1|scaffold_179143 (10788-10604) | |
| 106-279, gnl|panTro1|chr3 (40320177-40320360) | |
| 106-279, gnl|rheMac2|chr5 (32806704-32806887) | |
| 106-279, gnl|rn3|chr14 (46860737-46860554) | |
| 106-279, gnl|tetNig1|chrUn_random (51161742-51161917) | |
| 541-672, gnl|bosTau2|chr6 (29659527-29659396) | |
| 541-672, gnl|canFam2|chr3 (77193259-77193141) | |
| 541-672, gnl|danRer3|chr15 (7893158-7893264) | |
| 541-672, gnl|dasNov1|scaffold_162080 (3797-3679) | |
| 541-672, gnl|echTel1|scaffold_73287 (321-421) | |
| 541-672, gnl|fr1|chrUn (236895051-236895165) | |
| 541-672, gnl|galGal2|chr4 (70026849-70026744) | |
| 541-672, gnl|hg17|chr4 (37664235-37664353) | |
| 541-672, gnl|Hg17|chr4 (37664243-37664374) | |
| 541-672, gnl|loxAfr1|scaffold_3139 (7326-7444) | |
| 541-672, gnl|mm7|chr5 (63457593-63457711) | |
| 541-672, gnl|Mm7|chr5 (63457601-63457732) | |
| 541-672, gnl|monDom2|scaffold_26 (2692043-2692158) | |
| 541-672, gnl|oryCun1|scaffold_141391 (8959-8842) | |
| 541-672, gnl|panTro1|chr3 (40330453-40330571) | |
| 541-672, gnl|rheMac2|chr5 (32817958-32818076) | |
| 541-672, gnl|rn3|chr14 (46856881-46856763) | |
| 541-672, gnl|tetNig1|chrUn_random (51163426-51163540) | |
| 541-672, gnl|xenTro1|scaffold_152 (736219-736335) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 106-279, gnl|bosTau2|chr6 (29669952-29669779) | |
| 106-279, gnl|canFam2|chr3 (77203775-77203592) | |
| 106-279, gnl|danRer3|chr15 (7882340-7882524) | |
| 106-279, gnl|dasNov1|scaffold_240647 (148-331) | |
| 106-279, gnl|echTel1|scaffold_289389 (50171-50354) | |
| 106-279, gnl|fr1|chrUn (236893865-236894041) | |
| 106-279, gnl|galGal2|chr4 (70031568-70031385) | |
| 106-279, gnl|hg17|chr4 (37654139-37654322) | |
| 106-279, gnl|Hg17|chr4 (37654150-37654323) | |
| 106-279, gnl|loxAfr1|scaffold_33163 (22236-22419) | |
| 106-279, gnl|mm7|chr5 (63450864-63451047) | |
| 106-279, gnl|Mm7|chr5 (63450875-63451048) | |
| 106-279, gnl|monDom2|scaffold_26 (2685477-2685660) | |
| 106-279, gnl|oryCun1|scaffold_179143 (10788-10604) | |
| 106-279, gnl|panTro1|chr3 (40320177-40320360) | |
| 106-279, gnl|rheMac2|chr5 (32806704-32806887) | |
| 106-279, gnl|rn3|chr14 (46860737-46860554) | |
| 106-279, gnl|tetNig1|chrUn_random (51161742-51161917) | |
| 541-672, gnl|bosTau2|chr6 (29659527-29659396) | |
| 541-672, gnl|canFam2|chr3 (77193259-77193141) | |
| 541-672, gnl|danRer3|chr15 (7893158-7893264) | |
| 541-672, gnl|dasNov1|scaffold_162080 (3797-3679) | |
| 541-672, gnl|echTel1|scaffold_73287 (321-421) | |
| 541-672, gnl|fr1|chrUn (236895051-236895165) | |
| 541-672, gnl|galGal2|chr4 (70026849-70026744) | |
| 541-672, gnl|hg17|chr4 (37664235-37664353) | |
| 541-672, gnl|Hg17|chr4 (37664243-37664374) | |
| 541-672, gnl|loxAfr1|scaffold_3139 (7326-7444) | |
| 541-672, gnl|mm7|chr5 (63457593-63457711) | |
| 541-672, gnl|Mm7|chr5 (63457601-63457732) | |
| 541-672, gnl|monDom2|scaffold_26 (2692043-2692158) | |
| 541-672, gnl|oryCun1|scaffold_141391 (8959-8842) | |
| 541-672, gnl|panTro1|chr3 (40330453-40330571) | |
| 541-672, gnl|rheMac2|chr5 (32817958-32818076) | |
| 541-672, gnl|rn3|chr14 (46856881-46856763) | |
| 541-672, gnl|tetNig1|chrUn_random (51163426-51163540) | |
| 541-672, gnl|xenTro1|scaffold_152 (736219-736335) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) |