Non-Coding RNA Search

Ss1.1-Utr1-UTR010006D12.5

Sequence:


               
               AGTTGAGCTGCTCGCGAGGAGAAGAGTCCGTGGGGAAGTAATCCTGCGTGAGATAGGAGC
TCTCATGATCCCTGCTTCGCTGATGGGGAAAGGCCCAGAGAGAGTCAACGCCTTGCCGAG
GGTCACATGTCAGCTCAGGCTCTGAACTCAGGAGCCCCCGCCTGCAGCGTGTACGAGGCT
GAAGTGACAGTGGCCATGGACCAGCCAGCTGGCCTGCAGGTGGACTACGTCTTCCGGGGT
GTGGAGCACGCAGTGCGGGTGATGGTGTCTGGACAGGTGCTAGAGCTGGAGGTGGAGGAC
CGGATGACGGCTGACCAGTGGCGGGGCGAGTTCGATGCCAGCTGTGAGTGTGCCTACATG
GGTGGGCTCGCCTGTCCTTCCCCGGGATCAACTTCTCCCAGAAGATGAGGCCAACCAGGA
TCGCGTCCACCTGCCTATTCTACCTGACCAGAGGCTTTCTAAGGTGGGGAGGGGGTGGGG
AGCTCATCCCTTGGGCCAGAGGCACTGGTCTTGGGGACAGTTGGACAGCTAGGGTGCATT
GCCCTTGGGCTGGGCAAGTGGTCAGACCTCAGGAAGGACATTTCTCCCTACCTAGTCATC
GAAGATTTGACTCACAAGACAGGGAACTTCAAACAGTTCAACATCTTCTGTAACATGCTG
GAGTCGGCTCTCATGCAGGTAGGGGCCAGGGTTGGGGGCTGGGGGAGGTGTGCCCTGGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTTGAGCTGCTCGCGAGGAGAAGAGTCCGTGGGGAAGTAATCCTGCGTGAGATAGGAGC
TCTCATGATCCCTGCTTCGCTGATGGGGAAAGGCCCAGAGAGAGTCAACGCCTTGCCGAG
GGTCACATGTCAGCTCAGGCTCTGAACTCAGGAGCCCCCGCCTGCAGCGTGTACGAGGCT
GAAGTGACAGTGGCCATGGACCAGCCAGCTGGCCTGCAGGTGGACTACGTCTTCCGGGGT
GTGGAGCACGCAGTGCGGGTGATGGTGTCTGGACAGGTGCTAGAGCTGGAGGTGGAGGAC
CGGATGACGGCTGACCAGTGGCGGGGCGAGTTCGATGCCAGCTGTGAGTGTGCCTACATG
GGTGGGCTCGCCTGTCCTTCCCCGGGATCAACTTCTCCCAGAAGATGAGGCCAACCAGGA
TCGCGTCCACCTGCCTATTCTACCTGACCAGAGGCTTTCTAAGGTGGGGAGGGGGTGGGG
AGCTCATCCCTTGGGCCAGAGGCACTGGTCTTGGGGACAGTTGGACAGCTAGGGTGCATT
GCCCTTGGGCTGGGCAAGTGGTCAGACCTCAGGAAGGACATTTCTCCCTACCTAGTCATC
GAAGATTTGACTCACAAGACAGGGAACTTCAAACAGTTCAACATCTTCTGTAACATGCTG
GAGTCGGCTCTCATGCAGGTAGGGGCCAGGGTTGGGGGCTGGGGGAGGTGTGCCCTGGAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|9789610|gb|AAF98366.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|9789610|gb|AAF98366.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               183-698, gnl|bosTau2|chr18 (50592400-50592912)
               

               
               183-698, gnl|Hg17|chr19 (51198104-51198632)
               

               
               183-698, gnl|Mm7|chr7 (16586520-16586024)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               183-698, gnl|bosTau2|chr18 (50592400-50592912)
               

               
               183-698, gnl|Hg17|chr19 (51198104-51198632)
               

               
               183-698, gnl|Mm7|chr7 (16586520-16586024)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               eep (0.122564)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               eep (0.122564)

	183-698, gnl\|bosTau2\|chr18 (50592400-50592912)
	183-698, gnl\|Hg17\|chr19 (51198104-51198632)
	183-698, gnl\|Mm7\|chr7 (16586520-16586024)