Ss1.1-Utr1-UTR010006F04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTAAAATTTTATGTTCTTAAATTTTTAGCATTTATTCCATAATTTTATGATGAAAACTGT GTTTGTTACTTGGGGAAAATTCTGTAGATTCATGAATTTGGACAGAAATGTTTATAGGTG CCATGTCATGATTCATTTATTTTCTGGTGTTGTTTTCTTTGTATTTGTTTATGTTATTCA GGAAATTTGACTTCATCATTCACAGATTTTGTTACTTTACCAGTTTCGATTTGTATTTAT TTGGACTTAGCTTTTAAAATATCAAATGTTAGGAGTTCCCTTTGTGTTGCAGTGGAAATG AATCTGACCAGGAACCAAGAGGTTGAAGGTTTGATTCCTGGCCTTGCTCAGTAGGTTAAG GATCCAGCATTGCCATGAGCTGTGGTGTAGATCACAGATGCAGCTTGGATGCTGCGTTGC TGTGGTGTATGCCGGCAGCTGTAGCTCCAATTGGACCCCTAGCCTGGGAACCTCCATATG CCACAAATGCAGCCCGAAAAAGCAAAAAAAAAAAAAAAGTTAGCTTCCTATAAGAGGCTT CCAATGTGATCAGATACTCTTAGAAGTCTTGCAGGTCTACTGTATTTTCAAAAGCAAGAG ATCACACTGAAAAATTTGGGAGCTTCATTTTACTTTCACAGCATTCTCAATTTTGGCTTC TTTAAGTTGTATTAAATCCATGAGAAGTTTATTATTTTTCACCACAGCTGAGTGAATTTA TGGATATGTACTTGTCTTTTATATGAATGTAACATCCTACTTTTAGTTCTTCACAGGGTA TTGAAATTATTTAATCAATCAGGACATTCTCAGATTCCCATCATGACTCAGTGGTTAACG AATCCAACTAGGAACCATAAGGTTGCAGGTTCGATCCCAGGTGTTGCTCAGTGGGTTAAG GATCCGGTGTTGATGTGAGCTGTGGTGTAGGTCGCGATGCTGCTTGGATCTGGCATTGGT GTGGCTGTGGCGTGGGCCGGTGGCTACAGCTCCCATTAGACCTCTAGCCTGGGAACCTCC ATATGCCTCAGGTGTGGCCTAGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTAAAATTTTATGTTCTTAAATTTTTAGCATTTATTCCATAATTTTATGATGAAAACTGT GTTTGTTACTTGGGGAAAATTCTGTAGATTCATGAATTTGGACAGAAATGTTTATAGGTG CCATGTCATGATTCATTTATTTTCTGGTGTTGTTTTCTTTGTATTTGTTTATGTTATTCA GGAAATTTGACTTCATCATTCACAGATTTTGTTACTTTACCAGTTTCGATTTGTATTTAT TTGGACTTAGCTTTTAAAATATCAAATGTTAGGAGTTCCCTTTGTGTTGCAGTGGAAATG AATCTGACCAGGAACCAAGAGGTTGAAGGTTTGATTCCTGGCCTTGCTCAGTAGGTTAAG GATCCAGCATTGCCATGAGCTGTGGTGTAGATCACAGATGCAGCTTGGATGCTGCGTTGC TGTGGTGTATGCCGGCAGCTGTAGCTCCAATTGGACCCCTAGCCTGGGAACCTCCATATG CCACAAATGCAGCCCGAAAAAGCAAAAAAAAAAAAAAAGTTAGCTTCCTATAAGAGGCTT CCAATGTGATCAGATACTCTTAGAAGTCTTGCAGGTCTACTGTATTTTCAAAAGCAAGAG ATCACACTGAAAAATTTGGGAGCTTCATTTTACTTTCACAGCATTCTCAATTTTGGCTTC TTTAAGTTGTATTAAATCCATGAGAAGTTTATTATTTTTCACCACAGCTGAGTGAATTTA TGGATATGTACTTGTCTTTTATATGAATGTAACATCCTACTTTTAGTTCTTCACAGGGTA TTGAAATTATTTAATCAATCAGGACATTCTCAGATTCCCATCATGACTCAGTGGTTAACG AATCCAACTAGGAACCATAAGGTTGCAGGTTCGATCCCAGGTGTTGCTCAGTGGGTTAAG GATCCGGTGTTGATGTGAGCTGTGGTGTAGGTCGCGATGCTGCTTGGATCTGGCATTGGT GTGGCTGTGGCGTGGGCCGGTGGCTACAGCTCCCATTAGACCTCTAGCCTGGGAACCTCC ATATGCCTCAGGTGTGGCCTAGAA |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 1-271, gnl|bosTau2|chr9 (7369242-7369511) | |
| 1-271, gnl|canFam2|chr12 (39943726-39944441) | |
| 1-271, gnl|dasNov1|scaffold_4419 (92803-92073) | |
| 1-271, gnl|echTel1|scaffold_308364 (119322-118615) | |
| 1-271, gnl|hg17|chr6 (76058413-76059148) | |
| 1-271, gnl|Hg17|chr6 (76058961-76058700) | |
| 1-271, gnl|loxAfr1|scaffold_4387 (20004-20725) | |
| 1-271, gnl|mm7|chr9 (79877684-79878377) | |
| 1-271, gnl|Mm7|chr9 (79878234-79877973) | |
| 1-271, gnl|monDom2|scaffold_0 (158087464-158086722) | |
| 1-271, gnl|oryCun1|scaffold_132474 (5980-6625) | |
| 1-271, gnl|panTro1|chr5 (77413209-77413946) | |
| 1-271, gnl|rheMac2|chr4 (71434132-71434885) | |
| 1-271, gnl|rn3|chr8 (84877322-84878026) | |
| 506-811, gnl|bosTau2|chr9 (7369495-7369805) | |
| 506-811, gnl|canFam2|chr12 (39943726-39944441) | |
| 506-811, gnl|dasNov1|scaffold_4419 (92803-92073) | |
| 506-811, gnl|echTel1|scaffold_308364 (119322-118615) | |
| 506-811, gnl|hg17|chr6 (76058413-76059148) | |
| 506-811, gnl|Hg17|chr6 (76058716-76058428) | |
| 506-811, gnl|loxAfr1|scaffold_4387 (20004-20725) | |
| 506-811, gnl|mm7|chr9 (79877684-79878377) | |
| 506-811, gnl|Mm7|chr9 (79877989-79877699) | |
| 506-811, gnl|monDom2|scaffold_0 (158087464-158086722) | |
| 506-811, gnl|oryCun1|scaffold_132474 (5980-6625) | |
| 506-811, gnl|panTro1|chr5 (77413209-77413946) | |
| 506-811, gnl|rheMac2|chr4 (71434132-71434885) | |
| 506-811, gnl|rn3|chr8 (84877322-84878026) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-271, gnl|bosTau2|chr9 (7369242-7369511) | |
| 1-271, gnl|canFam2|chr12 (39943726-39944441) | |
| 1-271, gnl|dasNov1|scaffold_4419 (92803-92073) | |
| 1-271, gnl|echTel1|scaffold_308364 (119322-118615) | |
| 1-271, gnl|hg17|chr6 (76058413-76059148) | |
| 1-271, gnl|Hg17|chr6 (76058961-76058700) | |
| 1-271, gnl|loxAfr1|scaffold_4387 (20004-20725) | |
| 1-271, gnl|mm7|chr9 (79877684-79878377) | |
| 1-271, gnl|Mm7|chr9 (79878234-79877973) | |
| 1-271, gnl|monDom2|scaffold_0 (158087464-158086722) | |
| 1-271, gnl|oryCun1|scaffold_132474 (5980-6625) | |
| 1-271, gnl|panTro1|chr5 (77413209-77413946) | |
| 1-271, gnl|rheMac2|chr4 (71434132-71434885) | |
| 1-271, gnl|rn3|chr8 (84877322-84878026) | |
| 506-811, gnl|bosTau2|chr9 (7369495-7369805) | |
| 506-811, gnl|canFam2|chr12 (39943726-39944441) | |
| 506-811, gnl|dasNov1|scaffold_4419 (92803-92073) | |
| 506-811, gnl|echTel1|scaffold_308364 (119322-118615) | |
| 506-811, gnl|hg17|chr6 (76058413-76059148) | |
| 506-811, gnl|Hg17|chr6 (76058716-76058428) | |
| 506-811, gnl|loxAfr1|scaffold_4387 (20004-20725) | |
| 506-811, gnl|mm7|chr9 (79877684-79878377) | |
| 506-811, gnl|Mm7|chr9 (79877989-79877699) | |
| 506-811, gnl|monDom2|scaffold_0 (158087464-158086722) | |
| 506-811, gnl|oryCun1|scaffold_132474 (5980-6625) | |
| 506-811, gnl|panTro1|chr5 (77413209-77413946) | |
| 506-811, gnl|rheMac2|chr4 (71434132-71434885) | |
| 506-811, gnl|rn3|chr8 (84877322-84878026) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| vin (0.332557) | |
| ssp (0.271039) | |
| nms (0.213858) | |
| gul (0.177588) | |
| tbr (0.154178) | |
| che (0.136314) | |
| ste (0.135208) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| vin (0.332557) | |
| ssp (0.271039) | |
| nms (0.213858) | |
| gul (0.177588) | |
| tbr (0.154178) | |
| che (0.136314) | |
| ste (0.135208) |