Ss1.1-Utr1-UTR010007A02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCAAGCCACCGGGTCCCTGGAGGAGGAGAAGAGCAGGCTTCTGGCTGAGGCAGCAGTCG AACTTCGGGAGGAGAACACAAGGCAGGAGCGGATCTTGGCCCTTGCCAAGCGCCTGGCTG TGCTTCGAGGAGAGGACCCAGATAAAGTGACCCTCCAGGACTATCACCTTCCGGACAGTG ATGATGAAGAGGATGAGGAGACAGCCATCCAGAGAGTCCTGCGGCAGCTCACTGAAGAAG CTGCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAGCCAAATCTCCAACCCCAAG CCCAATCCAGCAGGGTAGAGCCTAAGGCCCAGGCCATGGCCCCCAGGCCTGAGGCTGAGG AAGAGGAGCTCCCCTGGTGCTGTATCTGTAATGAGGATGCCACGCTGCGCTGTGCTGGCT GTGATGGAGACCTCTATTGTGTTCGCTGCTTCCGGGAAGGCCACGATGCTTTTGAACTTA AAGAGCACCAGACATCTGCCTACCACCCCTTGCACAAAGGGCGAGAGCACTGAGGGAACC CTGGTCCTCCCGGGAAGGCCATCCTACAGGCAGTCACACAGGCCGGGGCACCCACCAGCG CATCTGATGGGAGAGCACATCAGGCTAGACTGCTTACCGGGAGTTCCCTGGTGGCTCAGC AGGTGAAGGATCCAGTGTTTTCACTGCTGTGGCTTGGGTCACTACTGTGCTGTGGGTTTG ATCCCTGGTCCTGGAACTTCCGCATGCCAAGAATGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCAAGCCACCGGGTCCCTGGAGGAGGAGAAGAGCAGGCTTCTGGCTGAGGCAGCAGTCG AACTTCGGGAGGAGAACACAAGGCAGGAGCGGATCTTGGCCCTTGCCAAGCGCCTGGCTG TGCTTCGAGGAGAGGACCCAGATAAAGTGACCCTCCAGGACTATCACCTTCCGGACAGTG ATGATGAAGAGGATGAGGAGACAGCCATCCAGAGAGTCCTGCGGCAGCTCACTGAAGAAG CTGCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAGCCAAATCTCCAACCCCAAG CCCAATCCAGCAGGGTAGAGCCTAAGGCCCAGGCCATGGCCCCCAGGCCTGAGGCTGAGG AAGAGGAGCTCCCCTGGTGCTGTATCTGTAATGAGGATGCCACGCTGCGCTGTGCTGGCT GTGATGGAGACCTCTATTGTGTTCGCTGCTTCCGGGAAGGCCACGATGCTTTTGAACTTA AAGAGCACCAGACATCTGCCTACCACCCCTTGCACAAAGGGCGAGAGCACTGAGGGAACC CTGGTCCTCCCGGGAAGGCCATCCTACAGGCAGTCACACAGGCCGGGGCACCCACCAGCG CATCTGATGGGAGAGCACATCAGGCTAGACTGCTTACCGGGAGTTCCCTGGTGGCTCAGC AGGTGAAGGATCCAGTGTTTTCACTGCTGTGGCTTGGGTCACTACTGTGCTGTGGGTTTG ATCCCTGGTCCTGGAACTTCCGCATGCCAAGAATGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 42 entry(ies) | More info |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
| 1-147, gnl|bosTau2|chr10 (26687538-26687684) | |
| 1-147, gnl|canFam2|chr30 (10939884-10940046) | |
| 1-147, gnl|echTel1|scaffold_315379 (39997-39838) | |
| 1-147, gnl|fr1|chrUn (59978279-59978447) | |
| 1-147, gnl|hg17|chr15 (38892179-38892335) | |
| 1-147, gnl|Hg17|chr15 (38892246-38892392) | |
| 1-147, gnl|loxAfr1|scaffold_2794 (19278-19442) | |
| 1-147, gnl|mm7|chr2 (118955670-118955832) | |
| 1-147, gnl|Mm7|chr2 (118955743-118955889) | |
| 1-147, gnl|monDom2|scaffold_12 (1391330-1391172) | |
| 1-147, gnl|oryCun1|scaffold_211631 (53185-53347) | |
| 1-147, gnl|panTro1|chr16 (38805679-38805835) | |
| 1-147, gnl|rheMac2|chr7 (19193682-19193838) | |
| 1-147, gnl|rn3|chr3 (105624485-105624641) | |
| 225-327, gnl|bosTau2|chr10 (26688510-26688612) | |
| 225-327, gnl|canFam2|chr30 (10940921-10941032) | |
| 225-327, gnl|dasNov1|scaffold_12152 (837-722) | |
| 225-327, gnl|echTel1|scaffold_266467 (3036-3151) | |
| 225-327, gnl|fr1|chrUn (59978911-59979009) | |
| 225-327, gnl|hg17|chr15 (38893201-38893316) | |
| 225-327, gnl|Hg17|chr15 (38893200-38893302) | |
| 225-327, gnl|mm7|chr2 (118957056-118957171) | |
| 225-327, gnl|Mm7|chr2 (118957055-118957157) | |
| 225-327, gnl|monDom2|scaffold_12 (1389237-1389143) | |
| 225-327, gnl|oryCun1|scaffold_211631 (54145-54260) | |
| 225-327, gnl|panTro1|chr16 (38806701-38806816) | |
| 225-327, gnl|rheMac2|chr7 (19194762-19194877) | |
| 225-327, gnl|rn3|chr3 (105625822-105625937) | |
| 454-636, gnl|bosTau2|chr10 (26688922-26689104) | |
| 454-636, gnl|canFam2|chr30 (10941246-10941755) | |
| 454-636, gnl|dasNov1|scaffold_12152 (464-4) | |
| 454-636, gnl|echTel1|scaffold_266467 (3383-3837) | |
| 454-636, gnl|hg17|chr15 (38893566-38894053) | |
| 454-636, gnl|Hg17|chr15 (38893637-38893822) | |
| 454-636, gnl|loxAfr1|scaffold_2794 (20721-21224) | |
| 454-636, gnl|mm7|chr2 (118957396-118957893) | |
| 454-636, gnl|Mm7|chr2 (118957477-118957672) | |
| 454-636, gnl|monDom2|scaffold_12 (1388616-1388111) | |
| 454-636, gnl|oryCun1|scaffold_211631 (54508-54964) | |
| 454-636, gnl|panTro1|chr16 (38807066-38807553) | |
| 454-636, gnl|rheMac2|chr7 (19195127-19195621) | |
| 454-636, gnl|rn3|chr3 (105626153-105626619) |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-147, gnl|bosTau2|chr10 (26687538-26687684) | |
| 1-147, gnl|canFam2|chr30 (10939884-10940046) | |
| 1-147, gnl|echTel1|scaffold_315379 (39997-39838) | |
| 1-147, gnl|fr1|chrUn (59978279-59978447) | |
| 1-147, gnl|hg17|chr15 (38892179-38892335) | |
| 1-147, gnl|Hg17|chr15 (38892246-38892392) | |
| 1-147, gnl|loxAfr1|scaffold_2794 (19278-19442) | |
| 1-147, gnl|mm7|chr2 (118955670-118955832) | |
| 1-147, gnl|Mm7|chr2 (118955743-118955889) | |
| 1-147, gnl|monDom2|scaffold_12 (1391330-1391172) | |
| 1-147, gnl|oryCun1|scaffold_211631 (53185-53347) | |
| 1-147, gnl|panTro1|chr16 (38805679-38805835) | |
| 1-147, gnl|rheMac2|chr7 (19193682-19193838) | |
| 1-147, gnl|rn3|chr3 (105624485-105624641) | |
| 225-327, gnl|bosTau2|chr10 (26688510-26688612) | |
| 225-327, gnl|canFam2|chr30 (10940921-10941032) | |
| 225-327, gnl|dasNov1|scaffold_12152 (837-722) | |
| 225-327, gnl|echTel1|scaffold_266467 (3036-3151) | |
| 225-327, gnl|fr1|chrUn (59978911-59979009) | |
| 225-327, gnl|hg17|chr15 (38893201-38893316) | |
| 225-327, gnl|Hg17|chr15 (38893200-38893302) | |
| 225-327, gnl|mm7|chr2 (118957056-118957171) | |
| 225-327, gnl|Mm7|chr2 (118957055-118957157) | |
| 225-327, gnl|monDom2|scaffold_12 (1389237-1389143) | |
| 225-327, gnl|oryCun1|scaffold_211631 (54145-54260) | |
| 225-327, gnl|panTro1|chr16 (38806701-38806816) | |
| 225-327, gnl|rheMac2|chr7 (19194762-19194877) | |
| 225-327, gnl|rn3|chr3 (105625822-105625937) | |
| 454-636, gnl|bosTau2|chr10 (26688922-26689104) | |
| 454-636, gnl|canFam2|chr30 (10941246-10941755) | |
| 454-636, gnl|dasNov1|scaffold_12152 (464-4) | |
| 454-636, gnl|echTel1|scaffold_266467 (3383-3837) | |
| 454-636, gnl|hg17|chr15 (38893566-38894053) | |
| 454-636, gnl|Hg17|chr15 (38893637-38893822) | |
| 454-636, gnl|loxAfr1|scaffold_2794 (20721-21224) | |
| 454-636, gnl|mm7|chr2 (118957396-118957893) | |
| 454-636, gnl|Mm7|chr2 (118957477-118957672) | |
| 454-636, gnl|monDom2|scaffold_12 (1388616-1388111) | |
| 454-636, gnl|oryCun1|scaffold_211631 (54508-54964) | |
| 454-636, gnl|panTro1|chr16 (38807066-38807553) | |
| 454-636, gnl|rheMac2|chr7 (19195127-19195621) | |
| 454-636, gnl|rn3|chr3 (105626153-105626619) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pty (0.142714) | |
| lnt (0.142308) | |
| cty (0.10408) |