Ss1.1-Utr1-UTR010008E12.5
|
TCGCCTCCCGGTCATGAGGCTGCGCGGTTGGGCCTCCGGTCAGCGAGGCCCTCCCGGACC
CGCCTTTCGTCTTGTCCGCCCCGCCTCCGGACTGCCCTCCACACCGCCTGATTGCATTTC
TGGCCTCGCCGTGTTAGCCCCAACTGAGGGCCGGGAGCAAAGCCTTGCGAAGACCGGAGG
GCGCGGGTACCTCTGCTCCCGGCCATGTCTGGCTGTCACGCTCCAGAGGGAGACTGTGGC
TCGCGGCAATGCCTCGCGCAGGACAAGGAACATCCACGGTACCTGATCCCAGAGCTTTGC
AAACAGTTTTACCATTTGGGCTGGGTCACTGGCACTGGAGGAGGAATCAGCTTGAAGCAT
GGCAATGAAATCTACATTGCTCCTTCAGGAGTACAAAAGGAACGGATTCAGCCTGAAGAT
ATGTTTGTGTGTGACATCGATGAACAGGACATAAGTGGACCTCCACCGCATAAGAACCTG
AAGAAAAGCCAGTGTACGCCTCTTTTCATGAATGCTTACACAATGAGAGGAGCAGGTGCT
GTGATTCACACCCACTCTAAAGCTGCTGTCATGGCCACCCTTCTCTTCCCAGGAAGGGAG
TTTAAAATTACACATCAAGAGATGATCAAAGGAATAAAGAAATGTACCTCAGGAGGGTAT
TACAGATATGATGACATGTTAGTAGTCCCCATTATTGAGAACACACCTGAGGAGAAGGAC
CTCAAGGAGAGAATGGCCAGGGCAATGAATGAATACCCAGACTCCTGCGCCGTGCTCGTC
AGACGGCACGGAGTCTACGTCTGGGGAGAGACGTGGGAGAAGGCCAAAACCATGTGTGAG
TGTTACGACTATTTGTTCGATGTTGCCGTATCAATGAAGAAAGTAGGACTGGACCCTACA
CAGCTTCCTGTTGGAGAAAATGGAATTGTCTAAGCCAAGTGGAAGTTTATGATATACAGA
GACAAAGCTTAATTATTACTTAAATGACATGACTTTTTTAAACAAACTGAAAATTTCCAT
GAAGCTATTGATTTGTCACTAAATATTGCACAGACACTGGATTTTATTTGCTTATATTCT
TGTAATTTTAAATGACAATACAATGGAATAAAATTTTTATAATGAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCGCCTCCCGGTCATGAGGCTGCGCGGTTGGGCCTCCGGTCAGCGAGGCCCTCCCGGACC
CGCCTTTCGTCTTGTCCGCCCCGCCTCCGGACTGCCCTCCACACCGCCTGATTGCATTTC
TGGCCTCGCCGTGTTAGCCCCAACTGAGGGCCGGGAGCAAAGCCTTGCGAAGACCGGAGG
GCGCGGGTACCTCTGCTCCCGGCCATGTCTGGCTGTCACGCTCCAGAGGGAGACTGTGGC
TCGCGGCAATGCCTCGCGCAGGACAAGGAACATCCACGGTACCTGATCCCAGAGCTTTGC
AAACAGTTTTACCATTTGGGCTGGGTCACTGGCACTGGAGGAGGAATCAGCTTGAAGCAT
GGCAATGAAATCTACATTGCTCCTTCAGGAGTACAAAAGGAACGGATTCAGCCTGAAGAT
ATGTTTGTGTGTGACATCGATGAACAGGACATAAGTGGACCTCCACCGCATAAGAACCTG
AAGAAAAGCCAGTGTACGCCTCTTTTCATGAATGCTTACACAATGAGAGGAGCAGGTGCT
GTGATTCACACCCACTCTAAAGCTGCTGTCATGGCCACCCTTCTCTTCCCAGGAAGGGAG
TTTAAAATTACACATCAAGAGATGATCAAAGGAATAAAGAAATGTACCTCAGGAGGGTAT
TACAGATATGATGACATGTTAGTAGTCCCCATTATTGAGAACACACCTGAGGAGAAGGAC
CTCAAGGAGAGAATGGCCAGGGCAATGAATGAATACCCAGACTCCTGCGCCGTGCTCGTC
AGACGGCACGGAGTCTACGTCTGGGGAGAGACGTGGGAGAAGGCCAAAACCATGTGTGAG
TGTTACGACTATTTGTTCGATGTTGCCGTATCAATGAAGAAAGTAGGACTGGACCCTACA
CAGCTTCCTGTTGGAGAAAATGGAATTGTCTAAGCCAAGTGGAAGTTTATGATATACAGA
GACAAAGCTTAATTATTACTTAAATGACATGACTTTTTTAAACAAACTGAAAATTTCCAT
GAAGCTATTGATTTGTCACTAAATATTGCACAGACACTGGATTTTATTTGCTTATATTCT
TGTAATTTTAAATGACAATACAATGGAATAAAATTTTTATAATGAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
|
|
gi|14290597|gb|AAH09077.1| |
Protein identifier
|
gi|14290597|gb|AAH09077.1| |
|
2-262, gnl|bosTau2|chr15 (40216455-40216709) |
|
2-262, gnl|canFam2|chr18 (36031941-36031487) |
|
2-262, gnl|dasNov1|scaffold_27692 (45974-45481) |
|
2-262, gnl|hg17|chr11 (34894233-34894726) |
|
2-262, gnl|Hg17|chr11 (34894612-34894350) |
|
2-262, gnl|mm7|chr2 (102924689-102924301) |
|
2-262, gnl|Mm7|chr2 (102924399-102924629) |
|
2-262, gnl|oryCun1|scaffold_117498 (350-817) |
|
2-262, gnl|panTro1|chr9 (35304005-35304498) |
|
2-262, gnl|rheMac2|chr14 (36908154-36907673) |
|
2-262, gnl|rn3|chr3 (88202780-88202394) |
| |
|
528-669, gnl|bosTau2|chr15 (40236726-40236867) |
|
528-669, gnl|Hg17|chr11 (34866553-34866412) |
|
528-669, gnl|Mm7|chr2 (102940188-102940329) |
| |
|
828-1126, gnl|bosTau2|chr15 (40240264-40240573) |
|
828-1126, gnl|Hg17|chr11 (34860943-34860619) |
|
828-1126, gnl|Mm7|chr2 (102943248-102943579) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-262, gnl|bosTau2|chr15 (40216455-40216709) |
|
2-262, gnl|canFam2|chr18 (36031941-36031487) |
|
2-262, gnl|dasNov1|scaffold_27692 (45974-45481) |
|
2-262, gnl|hg17|chr11 (34894233-34894726) |
|
2-262, gnl|Hg17|chr11 (34894612-34894350) |
|
2-262, gnl|mm7|chr2 (102924689-102924301) |
|
2-262, gnl|Mm7|chr2 (102924399-102924629) |
|
2-262, gnl|oryCun1|scaffold_117498 (350-817) |
|
2-262, gnl|panTro1|chr9 (35304005-35304498) |
|
2-262, gnl|rheMac2|chr14 (36908154-36907673) |
|
2-262, gnl|rn3|chr3 (88202780-88202394) |
| |
|
528-669, gnl|bosTau2|chr15 (40236726-40236867) |
|
528-669, gnl|Hg17|chr11 (34866553-34866412) |
|
528-669, gnl|Mm7|chr2 (102940188-102940329) |
| |
|
828-1126, gnl|bosTau2|chr15 (40240264-40240573) |
|
828-1126, gnl|Hg17|chr11 (34860943-34860619) |
|
828-1126, gnl|Mm7|chr2 (102943248-102943579) |
|
ldo (0.873024) |
|
cst (0.700182) |
|
cte (0.58548) |
|
pro (0.512033) |
|
csk (0.422238) |
|
amn (0.417711) |
|
col (0.390016) |
|
nlu (0.383362) |
|
vin (0.332557) |
|
cki (0.330469) |
|
che (0.272628) |
|
ese (0.253004) |
|
bla (0.248694) |
|
med (0.232504) |
|
mgp (0.230681) |
|
eje (0.197668) |
|
cmu (0.186393) |
|
nep (0.183925) |
|
sto (0.179824) |
|
gul (0.177588) |
|
cut (0.169924) |
|
mga (0.160205) |
|
tbr (0.154178) |
|
bfe (0.149858) |
|
fat (0.147427) |
|
hlv (0.139256) |
|
ste (0.135208) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
kid (0.129735) |
|
cbl (0.114797) |
|
jej (0.0989218) |
|
ldo (0.873024) |
|
cst (0.700182) |
|
cte (0.58548) |
|
pro (0.512033) |
|
csk (0.422238) |
|
amn (0.417711) |
|
col (0.390016) |
|
nlu (0.383362) |
|
vin (0.332557) |
|
cki (0.330469) |
|
che (0.272628) |
|
ese (0.253004) |
|
bla (0.248694) |
|
med (0.232504) |
|
mgp (0.230681) |
|
eje (0.197668) |
|
cmu (0.186393) |
|
nep (0.183925) |
|
sto (0.179824) |
|
gul (0.177588) |
|
cut (0.169924) |
|
mga (0.160205) |
|
tbr (0.154178) |
|
bfe (0.149858) |
|
fat (0.147427) |
|
hlv (0.139256) |
|
ste (0.135208) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
kid (0.129735) |
|
cbl (0.114797) |
|
jej (0.0989218) |
