Non-Coding RNA Search

Ss1.1-Utr1-UTR010009E07.5

Sequence:


               
               AGTTGCTGCCCGGCATCTTTTGAACTCGAGTGACGAGGCCTGCGGGCAGGAGCAGCAGGC
GCCTAGGTTCGGCTCTCCTGGGTCTGGAGACTGGCTGGGTGTAGGAGGCCCATGGGATGG
ACTGGGAATTGAAGAATTTTCTCTATTCCACGTCGTGCTCTCCTGGGGCCCTCCGTCAGC
TTGGGTTCCCTGGGCCAGCCCTGGGTAACATTCAGCTTGTGCCTTCCAGGCCCCAGTCGT
GCTGCCTCGTTACGATGACCAGCGTGGTTAAGACAGTGTACACCCTGCAGCCCACTTCTG
TGCTGAGCAGCTGTCTGGCCGCAGGTGGGTGCCTATGCCGTCCCCACCCCCGCCCCCAGG
GCGCTGCCTGGGGTGGTCAGGCCAGGGAGTACGAGGAATCAAATTGGCAGCTGAGAATGG
AGGGTGTCGGCAGGGAAGGGCATTCTGTCGGCTCTGAGAGCCCACTAACTCCCTTAGAAC
CGGACTGTCTAGACTTATGGGAGTTAGGGAAAGAGCCAGATGGTGGGACTTTGTAGATTC
GCCCTATATCCGGATTCCCCCAAGCTGAGCATTCACCAATTAGATTTAAGTTGATGATTA
TTTTATAGTGTTATCCCATTAAGCTAGGAATCCCTTTTTAAACATTTGCCAGTTTTATTT
CCAGACTTGGGGTATCTGGAGGTACTGGGTTTGTTGTGACTGAGGGGAAAAGAGAGTCAT
TTGAAAGACAGGATACTTATTAGGGAGAAGCAGTCGGTTCACATGGTATCTGGTTCACAT
TTGTAACTGTACAGTGTGTCTCACATAGAACATAATAAACATTTTTTTGGGTGAAGTGAG
AGAGAAGGGACAGGCCTAGCTAGTATTTGGGAACCTTGGAAGAAGAGACATGGTTAAAAG
CAATGTTTGATTGCTTTGCCATCAGGCTTTGTGTTCTTTGGTTTGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTTGCTGCCCGGCATCTTTTGAACTCGAGTGACGAGGCCTGCGGGCAGGAGCAGCAGGC
GCCTAGGTTCGGCTCTCCTGGGTCTGGAGACTGGCTGGGTGTAGGAGGCCCATGGGATGG
ACTGGGAATTGAAGAATTTTCTCTATTCCACGTCGTGCTCTCCTGGGGCCCTCCGTCAGC
TTGGGTTCCCTGGGCCAGCCCTGGGTAACATTCAGCTTGTGCCTTCCAGGCCCCAGTCGT
GCTGCCTCGTTACGATGACCAGCGTGGTTAAGACAGTGTACACCCTGCAGCCCACTTCTG
TGCTGAGCAGCTGTCTGGCCGCAGGTGGGTGCCTATGCCGTCCCCACCCCCGCCCCCAGG
GCGCTGCCTGGGGTGGTCAGGCCAGGGAGTACGAGGAATCAAATTGGCAGCTGAGAATGG
AGGGTGTCGGCAGGGAAGGGCATTCTGTCGGCTCTGAGAGCCCACTAACTCCCTTAGAAC
CGGACTGTCTAGACTTATGGGAGTTAGGGAAAGAGCCAGATGGTGGGACTTTGTAGATTC
GCCCTATATCCGGATTCCCCCAAGCTGAGCATTCACCAATTAGATTTAAGTTGATGATTA
TTTTATAGTGTTATCCCATTAAGCTAGGAATCCCTTTTTAAACATTTGCCAGTTTTATTT
CCAGACTTGGGGTATCTGGAGGTACTGGGTTTGTTGTGACTGAGGGGAAAAGAGAGTCAT
TTGAAAGACAGGATACTTATTAGGGAGAAGCAGTCGGTTCACATGGTATCTGGTTCACAT
TTGTAACTGTACAGTGTGTCTCACATAGAACATAATAAACATTTTTTTGGGTGAAGTGAG
AGAGAAGGGACAGGCCTAGCTAGTATTTGGGAACCTTGGAAGAAGAGACATGGTTAAAAG
CAATGTTTGATTGCTTTGCCATCAGGCTTTGTGTTCTTTGGTTTGTGG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-934, gnl|bosTau2|chr10 (23771180-23772122)
               

               
               1-934, gnl|Hg17|chr15 (38462472-38463389)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-934, gnl|bosTau2|chr10 (23771180-23772122)
               

               
               1-934, gnl|Hg17|chr15 (38462472-38463389)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	1-934, gnl\|bosTau2\|chr10 (23771180-23772122)
	1-934, gnl\|Hg17\|chr15 (38462472-38463389)