Ss1.1-Utr1-UTR010011C10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCGCCCTGATAGAACTCCTGTATGGCAGTCAGCCTCTAACAAGAGCATTGATGACGTGC AAAGTTGGCTTTCTGCAGCTCATTGCTGTACCTATTGAAATGCTCCCC------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ AAAAAAGAAGAAAAAATGAAATGCTCCCCATGTACCAAGCTGTCATTTGCTGCCTCCAGG TCAGGTGAGGAGATGTTTGGCTCTGGTGCCTTTTGTTTTTTATCTCAGTGCTGCCTTCCC ATCCACCCACTCCCCCTTCTCCCTGCATGGGGGCAACAGCATTTCCAGAAGTACCTTGAG AAATCAGGGTATCCGGTTTTTAATGATCCCTGTAGTTCTGAGCTTCAATCATTCATCAGC ATTTCAGAGGTGTTATGATACTATTTGGTGGTGTCCCCAGAAGAAAAAAAAATAAAACAG GATAGGGAGTTCCCATCGTGGCTCAATGGAAACGAATCTAAGATCCACAAGGATCCCTGG CCTTGCTCAGTGGGTTAAGGATCCAGCTTTGCCATGAGCTTTGGTGTAGGTTGCAGACTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCGCCCTGATAGAACTCCTGTATGGCAGTCAGCCTCTAACAAGAGCATTGATGACGTGC AAAGTTGGCTTTCTGCAGCTCATTGCTGTACCTATTGAAATGCTCCCC------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ AAAAAAGAAGAAAAAATGAAATGCTCCCCATGTACCAAGCTGTCATTTGCTGCCTCCAGG TCAGGTGAGGAGATGTTTGGCTCTGGTGCCTTTTGTTTTTTATCTCAGTGCTGCCTTCCC ATCCACCCACTCCCCCTTCTCCCTGCATGGGGGCAACAGCATTTCCAGAAGTACCTTGAG AAATCAGGGTATCCGGTTTTTAATGATCCCTGTAGTTCTGAGCTTCAATCATTCATCAGC ATTTCAGAGGTGTTATGATACTATTTGGTGGTGTCCCCAGAAGAAAAAAAAATAAAACAG GATAGGGAGTTCCCATCGTGGCTCAATGGAAACGAATCTAAGATCCACAAGGATCCCTGG CCTTGCTCAGTGGGTTAAGGATCCAGCTTTGCCATGAGCTTTGGTGTAGGTTGCAGACTC |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 1-110, gnl|bosTau2|chr20 (37162616-37162507) | |
| 1-110, gnl|canFam2|chr34 (8087917-8087161) | |
| 1-110, gnl|canFam2|chr34 (8087116-8087427) | |
| 1-110, gnl|dasNov1|scaffold_65117 (2420-1678) | |
| 1-110, gnl|dasNov1|scaffold_65117 (1637-1945) | |
| 1-110, gnl|hg17|chr5 (9094256-9095023) | |
| 1-110, gnl|hg17|chr5 (7984123-7984437) | |
| 1-110, gnl|Hg17|chr5 (9094977-9094869) | |
| 1-110, gnl|loxAfr1|scaffold_98666 (5529-4733) | |
| 1-110, gnl|loxAfr1|scaffold_98666 (4750-5045) | |
| 1-110, gnl|mm7|chr15 (32803222-32802500) | |
| 1-110, gnl|mm7|chr15 (32802456-32802808) | |
| 1-110, gnl|Mm7|chr15 (32802544-32802689) | |
| 1-110, gnl|monDom2|scaffold_4 (28724265-28725083) | |
| 1-110, gnl|monDom2|scaffold_4 (28725111-28724808) | |
| 1-110, gnl|oryCun1|scaffold_145423 (16750-16485) | |
| 1-110, gnl|oryCun1|scaffold_172626 (95082-94316) | |
| 1-110, gnl|panTro1|chr4 (9300822-9301598) | |
| 1-110, gnl|panTro1|chr4 (8174795-8175109) | |
| 1-110, gnl|rheMac2|chr6 (8958379-8959148) | |
| 1-110, gnl|rheMac2|chr6 (7788794-7789085) | |
| 1-110, gnl|rn3|chr2 (85098678-85097895) | |
| 1-110, gnl|rn3|chr2 (85097852-85098240) | |
| 125-400, gnl|bosTau2|chr20 (37162521-37162235) | |
| 125-400, gnl|Hg17|chr5 (9094883-9094598) | |
| 125-400, gnl|Mm7|chr15 (32802675-32802940) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-110, gnl|bosTau2|chr20 (37162616-37162507) | |
| 1-110, gnl|canFam2|chr34 (8087917-8087161) | |
| 1-110, gnl|canFam2|chr34 (8087116-8087427) | |
| 1-110, gnl|dasNov1|scaffold_65117 (2420-1678) | |
| 1-110, gnl|dasNov1|scaffold_65117 (1637-1945) | |
| 1-110, gnl|hg17|chr5 (9094256-9095023) | |
| 1-110, gnl|hg17|chr5 (7984123-7984437) | |
| 1-110, gnl|Hg17|chr5 (9094977-9094869) | |
| 1-110, gnl|loxAfr1|scaffold_98666 (5529-4733) | |
| 1-110, gnl|loxAfr1|scaffold_98666 (4750-5045) | |
| 1-110, gnl|mm7|chr15 (32803222-32802500) | |
| 1-110, gnl|mm7|chr15 (32802456-32802808) | |
| 1-110, gnl|Mm7|chr15 (32802544-32802689) | |
| 1-110, gnl|monDom2|scaffold_4 (28724265-28725083) | |
| 1-110, gnl|monDom2|scaffold_4 (28725111-28724808) | |
| 1-110, gnl|oryCun1|scaffold_145423 (16750-16485) | |
| 1-110, gnl|oryCun1|scaffold_172626 (95082-94316) | |
| 1-110, gnl|panTro1|chr4 (9300822-9301598) | |
| 1-110, gnl|panTro1|chr4 (8174795-8175109) | |
| 1-110, gnl|rheMac2|chr6 (8958379-8959148) | |
| 1-110, gnl|rheMac2|chr6 (7788794-7789085) | |
| 1-110, gnl|rn3|chr2 (85098678-85097895) | |
| 1-110, gnl|rn3|chr2 (85097852-85098240) | |
| 125-400, gnl|bosTau2|chr20 (37162521-37162235) | |
| 125-400, gnl|Hg17|chr5 (9094883-9094598) | |
| 125-400, gnl|Mm7|chr15 (32802675-32802940) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| che (0.136314) |