Ss1.1-Utr1-UTR010013D09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGCGGGCGGCAGCGGGTCGGGAGTCGGCAGTCGGGAGTCGGGAGCCGGCCGGGCCGAGC AACGCCGCGGGGCTATGATCCGGAACGGGCACGAGACGGCGGGAGGCGCCGAGCGGCCAG GCCCGGGGGGCAGGCGCCCCGTGCGGGTGTGGTGTGACGGCTGCTATGACATGGTACATT ACGGCCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGGCGACCACCTCATCGTGGGTG TGCACACCGACGAGGAGATCTCCAAGCACAAGGGGCCCCCGGTGTTCACCCAGGAGGAGA GGTACAGGATGGTGCAGGCCATCAAGTGGGTGGACGAGGTGGTGCCAGCAGCCCCCTACG TCACCACGCTGGAGACGCTGGACAAGTACGGCTGCGACTTCTGCGTCCACGGCAATGACA TCACGCTGACCGTGGACGGCCGGGACACCTACGAAGAGGTGAAGCAGGCCGGGAGGTACA GAGAATGCAAGCGCACCCAGGGGGTGTCCACCACGGACCTCGTTGGCCGCATGCTGCTGG TGACCAAGGCTCATCACAGCAGCCAGGAGATGCCCTCGGAGTACCGGGAGTACGCGGACA GCTTCGGCAAGGGCCCTGGGGGGCGGAACCCCTGGACGGGGGTGTCCCAGTTTCTGCAGA CGTCCCAGAAGATCATCCAGTTTGCCTCGGGGAAAGAGCCTCAGCCCGGGGAGACGGTGG TCTACGTGGCCGGTGCCTTTGACCTGTTCCACATCGGGCACGTGGACTTCCTGGAGAAGG TGCACGGCCTGGCGGAGAGGCCCTACGTCATCGCCGGCCTGCACTTTGACCAGGAGGTCA ACCGCTACAAGGGGAAGAACTACCCCATCATGAACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGCGGGCGGCAGCGGGTCGGGAGTCGGCAGTCGGGAGTCGGGAGCCGGCCGGGCCGAGC AACGCCGCGGGGCTATGATCCGGAACGGGCACGAGACGGCGGGAGGCGCCGAGCGGCCAG GCCCGGGGGGCAGGCGCCCCGTGCGGGTGTGGTGTGACGGCTGCTATGACATGGTACATT ACGGCCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGGCGACCACCTCATCGTGGGTG TGCACACCGACGAGGAGATCTCCAAGCACAAGGGGCCCCCGGTGTTCACCCAGGAGGAGA GGTACAGGATGGTGCAGGCCATCAAGTGGGTGGACGAGGTGGTGCCAGCAGCCCCCTACG TCACCACGCTGGAGACGCTGGACAAGTACGGCTGCGACTTCTGCGTCCACGGCAATGACA TCACGCTGACCGTGGACGGCCGGGACACCTACGAAGAGGTGAAGCAGGCCGGGAGGTACA GAGAATGCAAGCGCACCCAGGGGGTGTCCACCACGGACCTCGTTGGCCGCATGCTGCTGG TGACCAAGGCTCATCACAGCAGCCAGGAGATGCCCTCGGAGTACCGGGAGTACGCGGACA GCTTCGGCAAGGGCCCTGGGGGGCGGAACCCCTGGACGGGGGTGTCCCAGTTTCTGCAGA CGTCCCAGAAGATCATCCAGTTTGCCTCGGGGAAAGAGCCTCAGCCCGGGGAGACGGTGG TCTACGTGGCCGGTGCCTTTGACCTGTTCCACATCGGGCACGTGGACTTCCTGGAGAAGG TGCACGGCCTGGCGGAGAGGCCCTACGTCATCGCCGGCCTGCACTTTGACCAGGAGGTCA ACCGCTACAAGGGGAAGAACTACCCCATCATGAACC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 19-163, gnl|bosTau2|chr19 (45430654-45430504) | |
| 19-163, gnl|Hg17|chr17 (77462585-77462435) | |
| 19-163, gnl|Mm7|chr11 (120726957-120726809) | |
| 252-418, gnl|bosTau2|chr19 (45428058-45427892) | |
| 252-418, gnl|Hg17|chr17 (77460206-77460040) | |
| 252-418, gnl|Mm7|chr11 (120724498-120724332) | |
| 610-755, gnl|bosTau2|chr19 (45425958-45425813) | |
| 610-755, gnl|canFam2|chr9 (3388223-3388085) | |
| 610-755, gnl|canFam2|chr9 (3388220-3388050) | |
| 610-755, gnl|danRer3|chr22 (10038088-10038224) | |
| 610-755, gnl|danRer3|chr22 (10038089-10038236) | |
| 610-755, gnl|echTel1|scaffold_267537 (2663-2801) | |
| 610-755, gnl|echTel1|scaffold_267537 (2666-2833) | |
| 610-755, gnl|fr1|chrUn (91805246-91805110) | |
| 610-755, gnl|fr1|chrUn (148478617-148478782) | |
| 610-755, gnl|galGal2|chr3_random (666459-666597) | |
| 610-755, gnl|galGal2|chr3_random (666462-666608) | |
| 610-755, gnl|hg17|chr17 (77457920-77458058) | |
| 610-755, gnl|Hg17|chr17 (77458068-77457923) | |
| 610-755, gnl|hg17|chr17_random (1963972-1964145) | |
| 610-755, gnl|loxAfr1|scaffold_143375 (90-229) | |
| 610-755, gnl|loxAfr1|scaffold_143375 (93-263) | |
| 610-755, gnl|mm7|chr11 (120721502-120721638) | |
| 610-755, gnl|mm7|chr11 (120721503-120721675) | |
| 610-755, gnl|Mm7|chr11 (120721648-120721503) | |
| 610-755, gnl|monDom2|scaffold_18 (14872749-14872887) | |
| 610-755, gnl|monDom2|scaffold_18 (14872752-14872925) | |
| 610-755, gnl|panTro1|chr19 (81220912-81221050) | |
| 610-755, gnl|panTro1|chr19 (81220915-81221087) | |
| 610-755, gnl|rheMac2|chr16 (77336399-77336537) | |
| 610-755, gnl|rheMac2|chr16 (77336402-77336574) | |
| 610-755, gnl|rn3|chr10 (110018866-110019004) | |
| 610-755, gnl|rn3|chr10 (110018869-110019041) | |
| 610-755, gnl|tetNig1|chr18 (2126762-2126930) | |
| 610-755, gnl|tetNig1|chr3 (10266075-10265939) | |
| 610-755, gnl|xenTro1|scaffold_973 (109796-109658) | |
| 610-755, gnl|xenTro1|scaffold_973 (109793-109644) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 19-163, gnl|bosTau2|chr19 (45430654-45430504) | |
| 19-163, gnl|Hg17|chr17 (77462585-77462435) | |
| 19-163, gnl|Mm7|chr11 (120726957-120726809) | |
| 252-418, gnl|bosTau2|chr19 (45428058-45427892) | |
| 252-418, gnl|Hg17|chr17 (77460206-77460040) | |
| 252-418, gnl|Mm7|chr11 (120724498-120724332) | |
| 610-755, gnl|bosTau2|chr19 (45425958-45425813) | |
| 610-755, gnl|canFam2|chr9 (3388223-3388085) | |
| 610-755, gnl|canFam2|chr9 (3388220-3388050) | |
| 610-755, gnl|danRer3|chr22 (10038088-10038224) | |
| 610-755, gnl|danRer3|chr22 (10038089-10038236) | |
| 610-755, gnl|echTel1|scaffold_267537 (2663-2801) | |
| 610-755, gnl|echTel1|scaffold_267537 (2666-2833) | |
| 610-755, gnl|fr1|chrUn (91805246-91805110) | |
| 610-755, gnl|fr1|chrUn (148478617-148478782) | |
| 610-755, gnl|galGal2|chr3_random (666459-666597) | |
| 610-755, gnl|galGal2|chr3_random (666462-666608) | |
| 610-755, gnl|hg17|chr17 (77457920-77458058) | |
| 610-755, gnl|Hg17|chr17 (77458068-77457923) | |
| 610-755, gnl|hg17|chr17_random (1963972-1964145) | |
| 610-755, gnl|loxAfr1|scaffold_143375 (90-229) | |
| 610-755, gnl|loxAfr1|scaffold_143375 (93-263) | |
| 610-755, gnl|mm7|chr11 (120721502-120721638) | |
| 610-755, gnl|mm7|chr11 (120721503-120721675) | |
| 610-755, gnl|Mm7|chr11 (120721648-120721503) | |
| 610-755, gnl|monDom2|scaffold_18 (14872749-14872887) | |
| 610-755, gnl|monDom2|scaffold_18 (14872752-14872925) | |
| 610-755, gnl|panTro1|chr19 (81220912-81221050) | |
| 610-755, gnl|panTro1|chr19 (81220915-81221087) | |
| 610-755, gnl|rheMac2|chr16 (77336399-77336537) | |
| 610-755, gnl|rheMac2|chr16 (77336402-77336574) | |
| 610-755, gnl|rn3|chr10 (110018866-110019004) | |
| 610-755, gnl|rn3|chr10 (110018869-110019041) | |
| 610-755, gnl|tetNig1|chr18 (2126762-2126930) | |
| 610-755, gnl|tetNig1|chr3 (10266075-10265939) | |
| 610-755, gnl|xenTro1|scaffold_973 (109796-109658) | |
| 610-755, gnl|xenTro1|scaffold_973 (109793-109644) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.383362) | |
| cag (0.151194) |