Ss1.1-Utr1-UTR010015A01.5
|
GATCCCTGCGGATGGCATGGAAGCAAAGACTCTTGGAAGCCCAACACCCAGAAAACCTGT
CTTATCTGTCAGTGCAAGAAAAATTAAGGACAATGCAGCCGACTGGCATAATTTAATCCT
GAAATGGGAAGCCCTCAATGACAGAGGTTTTGCTATTGCAAATAACATTGCCAACATGAA
AATCAGTTTATTGAGCAAAGATGAGACAGAACTGGAGAGCAGCAGCCTGGCTTCTGAGAA
TGCAGAGAAGATGCACCCGGAATACAGCAGGGAGCTGGAGACGCTGTGTGAGGAGCTGCA
GGCCACCCTGGATGGTCTGACCAAAATACAGATGAAAATGGAAAAGCTGTCTTCAACTAC
CAAGGGCGTTTGTGAACTGGAAAATTACCACTACACGGAGGAGCAAAAACGGCCCCTGCT
CTTTCACACGTGGCCCACGGCCCATTTTTATGCCGTTTCCCGCCGGCTCTCCGACATGTA
CGGGAGGGAGCTCAGCCTGAAGCGCGTGGTGGCGCAGGAGCTGGCGCACAGCGCGCACCG
CGACCTCGCCCTGAGCTACCTGGCCATGTGGCTGCACCAGCCCTACGTGGACAGCGACAG
CCAGCTGCTCCTGGAGAGCATGCTGCTGGAGACCGGGCACCGGCCGCTGTGACCGAGACA
CGGCCGAGCGCCTGCACAGCATCTGTAGCTCCTCAGCGGACAGCCTCTCGCGGTGGCCTG
GGTGCTGCACCCTGGCGTCACGCCCCGTGTCGTACCCCTGATCAGGGCCCATGCCGAGCC
CTGGGGGCACACCCTGTGCTCCCCGAGGGTCTCCCAGACCGGATCATTTCTCCAGTTCTG
TGGCCTCTCCAGACGCCCTTGGTGACCGCTGCATGCCACCTGTCACCATGAAGGCTTCTG
CGTGAAATAAAGGAGTCTCTCAACAGAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GATCCCTGCGGATGGCATGGAAGCAAAGACTCTTGGAAGCCCAACACCCAGAAAACCTGT
CTTATCTGTCAGTGCAAGAAAAATTAAGGACAATGCAGCCGACTGGCATAATTTAATCCT
GAAATGGGAAGCCCTCAATGACAGAGGTTTTGCTATTGCAAATAACATTGCCAACATGAA
AATCAGTTTATTGAGCAAAGATGAGACAGAACTGGAGAGCAGCAGCCTGGCTTCTGAGAA
TGCAGAGAAGATGCACCCGGAATACAGCAGGGAGCTGGAGACGCTGTGTGAGGAGCTGCA
GGCCACCCTGGATGGTCTGACCAAAATACAGATGAAAATGGAAAAGCTGTCTTCAACTAC
CAAGGGCGTTTGTGAACTGGAAAATTACCACTACACGGAGGAGCAAAAACGGCCCCTGCT
CTTTCACACGTGGCCCACGGCCCATTTTTATGCCGTTTCCCGCCGGCTCTCCGACATGTA
CGGGAGGGAGCTCAGCCTGAAGCGCGTGGTGGCGCAGGAGCTGGCGCACAGCGCGCACCG
CGACCTCGCCCTGAGCTACCTGGCCATGTGGCTGCACCAGCCCTACGTGGACAGCGACAG
CCAGCTGCTCCTGGAGAGCATGCTGCTGGAGACCGGGCACCGGCCGCTGTGACCGAGACA
CGGCCGAGCGCCTGCACAGCATCTGTAGCTCCTCAGCGGACAGCCTCTCGCGGTGGCCTG
GGTGCTGCACCCTGGCGTCACGCCCCGTGTCGTACCCCTGATCAGGGCCCATGCCGAGCC
CTGGGGGCACACCCTGTGCTCCCCGAGGGTCTCCCAGACCGGATCATTTCTCCAGTTCTG
TGGCCTCTCCAGACGCCCTTGGTGACCGCTGCATGCCACCTGTCACCATGAAGGCTTCTG
CGTGAAATAAAGGAGTCTCTCAACAGAAAAAAAAAA
|
|
gi|16551427|dbj|BAB71095.1| |
Protein identifier
|
gi|16551427|dbj|BAB71095.1| |
|
22-191, gnl|bosTau2|chr21 (46811336-46811167) |
|
22-191, gnl|Hg17|chr14 (101895679-101895510) |
|
22-191, gnl|Mm7|chr12 (108402320-108402151) |
| |
|
316-449, gnl|bosTau2|chr21 (46803387-46803254) |
|
316-449, gnl|canFam2|chr8 (73352685-73352861) |
|
316-449, gnl|echTel1|scaffold_289064 (87505-87344) |
|
316-449, gnl|galGal2|chr5 (46400318-46400475) |
|
316-449, gnl|hg17|chr14 (101886002-101886177) |
|
316-449, gnl|Hg17|chr14 (101886141-101886009) |
|
316-449, gnl|mm7|chr12 (108395094-108395270) |
|
316-449, gnl|Mm7|chr12 (108395233-108395101) |
|
316-449, gnl|monDom2|scaffold_6 (85862932-85863108) |
|
316-449, gnl|oryCun1|scaffold_215089 (85396-85233) |
|
316-449, gnl|panTro1|chr15 (102496641-102496816) |
|
316-449, gnl|rheMac2|chr7 (165637966-165638138) |
|
316-449, gnl|rn3|chr6 (135605470-135605646) |
|
316-449, gnl|xenTro1|scaffold_178 (1814838-1815005) |
| |
|
455-783, gnl|bosTau2|chr21 (46802139-46801817) |
|
455-783, gnl|Hg17|chr14 (101884844-101884518) |
|
455-783, gnl|Mm7|chr12 (108392384-108392059) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
22-191, gnl|bosTau2|chr21 (46811336-46811167) |
|
22-191, gnl|Hg17|chr14 (101895679-101895510) |
|
22-191, gnl|Mm7|chr12 (108402320-108402151) |
| |
|
316-449, gnl|bosTau2|chr21 (46803387-46803254) |
|
316-449, gnl|canFam2|chr8 (73352685-73352861) |
|
316-449, gnl|echTel1|scaffold_289064 (87505-87344) |
|
316-449, gnl|galGal2|chr5 (46400318-46400475) |
|
316-449, gnl|hg17|chr14 (101886002-101886177) |
|
316-449, gnl|Hg17|chr14 (101886141-101886009) |
|
316-449, gnl|mm7|chr12 (108395094-108395270) |
|
316-449, gnl|Mm7|chr12 (108395233-108395101) |
|
316-449, gnl|monDom2|scaffold_6 (85862932-85863108) |
|
316-449, gnl|oryCun1|scaffold_215089 (85396-85233) |
|
316-449, gnl|panTro1|chr15 (102496641-102496816) |
|
316-449, gnl|rheMac2|chr7 (165637966-165638138) |
|
316-449, gnl|rn3|chr6 (135605470-135605646) |
|
316-449, gnl|xenTro1|scaffold_178 (1814838-1815005) |
| |
|
455-783, gnl|bosTau2|chr21 (46802139-46801817) |
|
455-783, gnl|Hg17|chr14 (101884844-101884518) |
|
455-783, gnl|Mm7|chr12 (108392384-108392059) |
|
cag (0.302389) |
|
pty (0.285429) |
|
mas (0.210305) |
|
ill (0.175593) |
|
duo (0.172801) |
|
fhi (0.169578) |
|
nje (0.16592) |
|
hyp (0.142837) |
|
lnt (0.142308) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
cov (0.132153) |
|
ese (0.126502) |
|
cly (0.120642) |
|
ebs (0.118301) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
|
cag (0.302389) |
|
pty (0.285429) |
|
mas (0.210305) |
|
ill (0.175593) |
|
duo (0.172801) |
|
fhi (0.169578) |
|
nje (0.16592) |
|
hyp (0.142837) |
|
lnt (0.142308) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
cov (0.132153) |
|
ese (0.126502) |
|
cly (0.120642) |
|
ebs (0.118301) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
