Ss1.1-Utr1-UTR010015B02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCAGTGGGCGTAGCTGCTGGGCCAGAGACTACTCCAGTGGGGGTCAGTGTCCCAGGAGA TATGGCTCCCAGCTGCAGGGAAGCTGGAGAGGAATGAGCTCGAACATGCTGTGGAGTCAG GGCCCCTGCAGTGCCTGCATCAGTACTGGCCTGTCGGGAGTGGGATTTGGGCTCCGGTGG CTTGAAGAAGGAGTCAGGCAGCTTCCGGAGCCTCATGGGCACGGTCTGGGGCACGTTGGC CGTCTTGGGGTTCATGACGGCGTTGAAAAGCGCCTCCAGGTCGGTCTCCGAGTCCCCCCG AACGTGCACGATCTGGTGTCCGGCGGGGGGGGCCTGCGTCGCCGCTTGGGACCCCGGGGG TGCCGGCTGCCCCGGCCCGGACGGCGGGCCCTGCCCCTGGGGGGGCTGCGCAGGCGGCTG CCCTTGGCCCTGGGGGGCTGGTTGAGGCGGCGGCTGCTGCTGCCCGGGATCCATGGTTTC TGCCTCCCCCGACGCGCACCCAGACTAGGCGGGCAACGGCTCCACCCGGGCGCCCCGGCT CGACGGGTCGAGAGGGGAGAAGCGGCAAGGGCAGTGGGTCAGCGGCGGGAGCGGCGTTCG CCTCGCTCTCAGGGCCGGGGGGCTGCGCCGCGGCCCCGCATCCCCCGCCCCGGCGCCTCT GCCCCCGCCCTGCGCCCCGGCTCCACTGGTCCGGCGGCTGAGCCTCGGGAGGGGCTGCCA GAGACCCGAACCTGCAGCGCCCGAGAACTTTTTTCCTTCACTCCCCTGACGGATGCCGGA CAGCTAGTTGCCTTTCCCCTCCCCCTTTCTCTCTTATTTCCTTTTCGTGTTCCTTCCTTC CTCCCTTTCTTTTCCCCGGCGGCGGCTGCGCCCGACTGAGACAGAAACTTGCCTCGGACG CCAAAACTAAAGTTGAGAGAACCGCCCGCCCGAGCCGCGCGCGGCTCCGCCTCCTCGCGG CTCTTCCTTCCTCTGCGCGCCCGCCCGCACCGAATCTGTGGCCGGCCGCGGAGGGAAACT TTCCCCAGCAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCAGTGGGCGTAGCTGCTGGGCCAGAGACTACTCCAGTGGGGGTCAGTGTCCCAGGAGA TATGGCTCCCAGCTGCAGGGAAGCTGGAGAGGAATGAGCTCGAACATGCTGTGGAGTCAG GGCCCCTGCAGTGCCTGCATCAGTACTGGCCTGTCGGGAGTGGGATTTGGGCTCCGGTGG CTTGAAGAAGGAGTCAGGCAGCTTCCGGAGCCTCATGGGCACGGTCTGGGGCACGTTGGC CGTCTTGGGGTTCATGACGGCGTTGAAAAGCGCCTCCAGGTCGGTCTCCGAGTCCCCCCG AACGTGCACGATCTGGTGTCCGGCGGGGGGGGCCTGCGTCGCCGCTTGGGACCCCGGGGG TGCCGGCTGCCCCGGCCCGGACGGCGGGCCCTGCCCCTGGGGGGGCTGCGCAGGCGGCTG CCCTTGGCCCTGGGGGGCTGGTTGAGGCGGCGGCTGCTGCTGCCCGGGATCCATGGTTTC TGCCTCCCCCGACGCGCACCCAGACTAGGCGGGCAACGGCTCCACCCGGGCGCCCCGGCT CGACGGGTCGAGAGGGGAGAAGCGGCAAGGGCAGTGGGTCAGCGGCGGGAGCGGCGTTCG CCTCGCTCTCAGGGCCGGGGGGCTGCGCCGCGGCCCCGCATCCCCCGCCCCGGCGCCTCT GCCCCCGCCCTGCGCCCCGGCTCCACTGGTCCGGCGGCTGAGCCTCGGGAGGGGCTGCCA GAGACCCGAACCTGCAGCGCCCGAGAACTTTTTTCCTTCACTCCCCTGACGGATGCCGGA CAGCTAGTTGCCTTTCCCCTCCCCCTTTCTCTCTTATTTCCTTTTCGTGTTCCTTCCTTC CTCCCTTTCTTTTCCCCGGCGGCGGCTGCGCCCGACTGAGACAGAAACTTGCCTCGGACG CCAAAACTAAAGTTGAGAGAACCGCCCGCCCGAGCCGCGCGCGGCTCCGCCTCCTCGCGG CTCTTCCTTCCTCTGCGCGCCCGCCCGCACCGAATCTGTGGCCGGCCGCGGAGGGAAACT TTCCCCAGCAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 1-159, gnl|bosTau2|chr2 (84082164-84082322) | |
| 1-159, gnl|canFam2|chr5 (32502701-32502546) | |
| 1-159, gnl|canFam2|chr5 (32502705-32502546) | |
| 1-159, gnl|danRer3|chr18 (39412562-39412422) | |
| 1-159, gnl|danRer3|chr18 (39412563-39412422) | |
| 1-159, gnl|dasNov1|scaffold_152939 (803-649) | |
| 1-159, gnl|dasNov1|scaffold_152939 (807-649) | |
| 1-159, gnl|echTel1|scaffold_310331 (50005-49851) | |
| 1-159, gnl|echTel1|scaffold_310331 (50006-49851) | |
| 1-159, gnl|fr1|chrUn (142803191-142803325) | |
| 1-159, gnl|fr1|chrUn (142803190-142803325) | |
| 1-159, gnl|galGal2|chr1 (174663213-174663061) | |
| 1-159, gnl|galGal2|chr1 (174663217-174663061) | |
| 1-159, gnl|Hg17|chr11 (101490234-101490075) | |
| 1-159, gnl|hg17|chr6 (147770040-147770195) | |
| 1-159, gnl|hg17|chrX (114126944-114127090) | |
| 1-159, gnl|loxAfr1|scaffold_4174 (100378-100223) | |
| 1-159, gnl|loxAfr1|scaffold_4174 (100379-100223) | |
| 1-159, gnl|mm7|chr9 (8025598-8025443) | |
| 1-159, gnl|mm7|chr9 (8025602-8025443) | |
| 1-159, gnl|Mm7|chr9 (8025450-8025608) | |
| 1-159, gnl|monDom2|scaffold_65 (7168351-7168506) | |
| 1-159, gnl|monDom2|scaffold_65 (7168347-7168506) | |
| 1-159, gnl|oryCun1|scaffold_150665 (5038-5190) | |
| 1-159, gnl|oryCun1|scaffold_150665 (5034-5190) | |
| 1-159, gnl|panTro1|chr5 (151207726-151207881) | |
| 1-159, gnl|panTro1|chrX (118016426-118016572) | |
| 1-159, gnl|rheMac2|chrX (54814964-54815119) | |
| 1-159, gnl|rheMac2|chrX (113572259-113572410) | |
| 1-159, gnl|rn3|chr8 (4846339-4846193) | |
| 1-159, gnl|rn3|chr8 (4846343-4846193) | |
| 1-159, gnl|tetNig1|chr7 (3724687-3724801) | |
| 1-159, gnl|xenTro1|scaffold_601 (111150-111305) | |
| 1-159, gnl|xenTro1|scaffold_601 (111146-111305) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-159, gnl|bosTau2|chr2 (84082164-84082322) | |
| 1-159, gnl|canFam2|chr5 (32502701-32502546) | |
| 1-159, gnl|canFam2|chr5 (32502705-32502546) | |
| 1-159, gnl|danRer3|chr18 (39412562-39412422) | |
| 1-159, gnl|danRer3|chr18 (39412563-39412422) | |
| 1-159, gnl|dasNov1|scaffold_152939 (803-649) | |
| 1-159, gnl|dasNov1|scaffold_152939 (807-649) | |
| 1-159, gnl|echTel1|scaffold_310331 (50005-49851) | |
| 1-159, gnl|echTel1|scaffold_310331 (50006-49851) | |
| 1-159, gnl|fr1|chrUn (142803191-142803325) | |
| 1-159, gnl|fr1|chrUn (142803190-142803325) | |
| 1-159, gnl|galGal2|chr1 (174663213-174663061) | |
| 1-159, gnl|galGal2|chr1 (174663217-174663061) | |
| 1-159, gnl|Hg17|chr11 (101490234-101490075) | |
| 1-159, gnl|hg17|chr6 (147770040-147770195) | |
| 1-159, gnl|hg17|chrX (114126944-114127090) | |
| 1-159, gnl|loxAfr1|scaffold_4174 (100378-100223) | |
| 1-159, gnl|loxAfr1|scaffold_4174 (100379-100223) | |
| 1-159, gnl|mm7|chr9 (8025598-8025443) | |
| 1-159, gnl|mm7|chr9 (8025602-8025443) | |
| 1-159, gnl|Mm7|chr9 (8025450-8025608) | |
| 1-159, gnl|monDom2|scaffold_65 (7168351-7168506) | |
| 1-159, gnl|monDom2|scaffold_65 (7168347-7168506) | |
| 1-159, gnl|oryCun1|scaffold_150665 (5038-5190) | |
| 1-159, gnl|oryCun1|scaffold_150665 (5034-5190) | |
| 1-159, gnl|panTro1|chr5 (151207726-151207881) | |
| 1-159, gnl|panTro1|chrX (118016426-118016572) | |
| 1-159, gnl|rheMac2|chrX (54814964-54815119) | |
| 1-159, gnl|rheMac2|chrX (113572259-113572410) | |
| 1-159, gnl|rn3|chr8 (4846339-4846193) | |
| 1-159, gnl|rn3|chr8 (4846343-4846193) | |
| 1-159, gnl|tetNig1|chr7 (3724687-3724801) | |
| 1-159, gnl|xenTro1|scaffold_601 (111150-111305) | |
| 1-159, gnl|xenTro1|scaffold_601 (111146-111305) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.132802) |