Non-Coding RNA Search

Ss1.1-Utr1-UTR010015D02.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTTTTTGCTTCAGATCATATTTATTGTAGGGTCCGGAGTGGGG
ATCATGGGGTTCGAGGGCAGCAACTGTGGCTGGCGGGATATGCCGCTCTCTGGCGGGAGG
GAGCTGTCAGGGTGTCAGGGGCCGGGCGGTCCCGGGCTGGAGGGCGCGCAGGATCCAGGC
GCTGCTCAGGGCAGGAGACGGCGCGCTGGCGCCTGGGGTGCGGGGTTCTCTAGACGTTTC
ACGCGCAGCAGGGCCCCCAGCACGCCCTCGGGGGGAACCTCAGGGGCCAGATCCTGGTCC
GCGGCGCGGCGGAGGCGACGCGGGGCAGCCACCGCCTCGGAGTCCGCGCTTCCGGCGAGG
ATCCGCCCCAACAAATACCTCAGTAGCTCCGGGTCCAAGTCAGGCGTCTCGTCGCCGGCG
TCCTCAGCATCTGGTACCGTGGGGCCATCATCATAGACTGGGGGCCGGGGTCTGAGCGCC
GCGGCTGGGGCAGGGGCCGGGACAAGCTGGGCTGCGAGGGCCGCAGGGTCCAAGCGGGCG
CGGAGCAAGGCGCGGGCGAGCTGTGCAGCGGGTGCATCGGGGTCGTCTTCCAAGCCCAGG
GCCGGGTCGTTGGTGCGGGGTCCGCCCCAGACGCGCAGCAGCTGCGCCAGGACGCGCGCC
TGCTGATCCTCGGCCTCCTGCGCCTCCGCCCGCGCCCGCTCCTGCCTTTCGGCCTCCAGC
AGGTGCGCCAGCGCCCGCGCCAGCTCCTGCACAGCCCCCGCCGCCTCTCCCCGGGGCGCT
GCCCGCCGGAAACGGCGGGGAGTACCGGCTTCAGCCATAGGCGGCGAGGCTGCGCCCAGG
CTGCGGGGCTCCTTTCCCGGCCTTGCGCAGAGCGCGAGGGGTGGCCCAAGTAAGCCCAAG
AGCAGCAGCACCAAAAGGCCGACGCCCCCGGCCCGCGGCCCGCGGAGCAGTGGCGACCCC
GCCATGCTGCCCCAGCGAGCCGGGCTCCGGACGGGCGGACTGGCTAGCAAGTGCGCAGCG
CCTGGGATAGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTTTTTGCTTCAGATCATATTTATTGTAGGGTCCGGAGTGGGG
ATCATGGGGTTCGAGGGCAGCAACTGTGGCTGGCGGGATATGCCGCTCTCTGGCGGGAGG
GAGCTGTCAGGGTGTCAGGGGCCGGGCGGTCCCGGGCTGGAGGGCGCGCAGGATCCAGGC
GCTGCTCAGGGCAGGAGACGGCGCGCTGGCGCCTGGGGTGCGGGGTTCTCTAGACGTTTC
ACGCGCAGCAGGGCCCCCAGCACGCCCTCGGGGGGAACCTCAGGGGCCAGATCCTGGTCC
GCGGCGCGGCGGAGGCGACGCGGGGCAGCCACCGCCTCGGAGTCCGCGCTTCCGGCGAGG
ATCCGCCCCAACAAATACCTCAGTAGCTCCGGGTCCAAGTCAGGCGTCTCGTCGCCGGCG
TCCTCAGCATCTGGTACCGTGGGGCCATCATCATAGACTGGGGGCCGGGGTCTGAGCGCC
GCGGCTGGGGCAGGGGCCGGGACAAGCTGGGCTGCGAGGGCCGCAGGGTCCAAGCGGGCG
CGGAGCAAGGCGCGGGCGAGCTGTGCAGCGGGTGCATCGGGGTCGTCTTCCAAGCCCAGG
GCCGGGTCGTTGGTGCGGGGTCCGCCCCAGACGCGCAGCAGCTGCGCCAGGACGCGCGCC
TGCTGATCCTCGGCCTCCTGCGCCTCCGCCCGCGCCCGCTCCTGCCTTTCGGCCTCCAGC
AGGTGCGCCAGCGCCCGCGCCAGCTCCTGCACAGCCCCCGCCGCCTCTCCCCGGGGCGCT
GCCCGCCGGAAACGGCGGGGAGTACCGGCTTCAGCCATAGGCGGCGAGGCTGCGCCCAGG
CTGCGGGGCTCCTTTCCCGGCCTTGCGCAGAGCGCGAGGGGTGGCCCAAGTAAGCCCAAG
AGCAGCAGCACCAAAAGGCCGACGCCCCCGGCCCGCGGCCCGCGGAGCAGTGGCGACCCC
GCCATGCTGCCCCAGCGAGCCGGGCTCCGGACGGGCGGACTGGCTAGCAAGTGCGCAGCG
CCTGGGATAGCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q9UHG2_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9UHG2_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               140-384, gnl|bosTau2|chrX (26296246-26296002)
               

               
               140-384, gnl|Hg17|chrX (48445864-48446138)
               

               
               140-384, gnl|Mm7|chrX (6356298-6356035)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               140-384, gnl|bosTau2|chrX (26296246-26296002)
               

               
               140-384, gnl|Hg17|chrX (48445864-48446138)
               

               
               140-384, gnl|Mm7|chrX (6356298-6356035)

Expressed library(ies): 17 entry(ies)

More info

Expressed library(ies): 17 entry(ies)

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               ebs (1.06471)
               

               
               hyp (0.85702)
               

               
               fcc (0.593354)
               

               
               fce (0.543183)
               

               
               ece (0.45861)
               

               
               elu (0.385356)
               

               
               pgl (0.35545)
               

               
               fbs (0.350693)
               

               
               ecc (0.345105)
               

               
               fhi (0.339155)
               

               
               pla (0.267344)
               

               
               cbr (0.255951)
               

               
               nje (0.16592)
               

               
               cov (0.132153)
               

               
               bla (0.124347)
               

               
               jca (0.11396)
               

               
               eje (0.0988338)

Expressed library(ies): 17 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (1.06471)
               

               
               hyp (0.85702)
               

               
               fcc (0.593354)
               

               
               fce (0.543183)
               

               
               ece (0.45861)
               

               
               elu (0.385356)
               

               
               pgl (0.35545)
               

               
               fbs (0.350693)
               

               
               ecc (0.345105)
               

               
               fhi (0.339155)
               

               
               pla (0.267344)
               

               
               cbr (0.255951)
               

               
               nje (0.16592)
               

               
               cov (0.132153)
               

               
               bla (0.124347)
               

               
               jca (0.11396)
               

               
               eje (0.0988338)

	140-384, gnl\|bosTau2\|chrX (26296246-26296002)
	140-384, gnl\|Hg17\|chrX (48445864-48446138)
	140-384, gnl\|Mm7\|chrX (6356298-6356035)

	ebs (1.06471)
	hyp (0.85702)
	fcc (0.593354)
	fce (0.543183)
	ece (0.45861)
	elu (0.385356)
	pgl (0.35545)
	fbs (0.350693)
	ecc (0.345105)
	fhi (0.339155)
	pla (0.267344)
	cbr (0.255951)
	nje (0.16592)
	cov (0.132153)
	bla (0.124347)
	jca (0.11396)
	eje (0.0988338)