Non-Coding RNA Search

Ss1.1-Utr1-UTR010015E03.5

Sequence:


               
               CCCGCTGAGCAGCCGGGCGCCCGCGTCCCCCACCGCGGCCACCGCCACCACCAGTGCTGC
CCCGTATCCGCCCAGACCCCGATCTAAAGCGTGAGGGGCCAAGTGCACGTAGGGGATGAA
GTACCCGCCCGCCACCAAGGCCGTGCCTAGAGCAAAAACCAAGAAGACCCGGCGTGTGAA
GAGATCTAGGCCGAGGGCTGCCAGAGGGCTTCGGGGTGGGGTCGGGGGGTCGCCTGGGAG
CTCCAGGGGTCGCAGCAGGGCGCCGCAGGGGGTGAGGTGGAGGGTAACGGCGCCGAGGAG
GAGCAGGGCGCCCCGCCAGCCGAAATGATCCAGGAGGAGCTGCAAGGCGGGCGCCAGGAG
CAGCGAGGAGGCCCCGTTGCCCGTGAGGGCCAGCCCCACGGCCAAGACTCGACGGCGGGA
GAAGTAACGTGAGAGGGTCCCAAGGGCAGGGGCGAACACCAGGGCCCAGCCGGCGCCAGC
AAGGACGCCCAGGCCAAGATAGAGGTGCAGCAGACTGCGGGCGAAAGCCGAGAAAACGAA
GCCGAGCGAGGTGAGGACGCCTCCAACCATCACAACCGGGCGCGCCCCCCAGCGGGTGCT
CAGGGCGCTGCCCACTGGGCTGGCTGCCTGCTGCACCGCCAAGGCCAGGGCGCTGACCCA
CGCAGTGTCCTGGCGAGGCCCAGGAAAATGCTCCGCGAGGTCAGGGAGGGCGAGGCCCAG
GGAGCGTAACAGCCCGTAGGAGAGCCCATTCACCACGAAGGCTGCGGCCGCCACCACCCA
GCCCCAGCCCCCGTCCGGGGGTCCGGCTGGCTTGGGGGTCATCGCCGCCCGACCTCTCCC
GGCGGTGCGGGGAGGGGAAGGGCGAGGAATGGCTCGGCCCGGTTTTCTCCCCGCTTTCCG
GGCGGGCGGGGCCCCAGAGGGGAGAGAATGCCGAGATGGAGCCCAACTTGCACAGGCTCT
CCGGGTAAACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCGCTGAGCAGCCGGGCGCCCGCGTCCCCCACCGCGGCCACCGCCACCACCAGTGCTGC
CCCGTATCCGCCCAGACCCCGATCTAAAGCGTGAGGGGCCAAGTGCACGTAGGGGATGAA
GTACCCGCCCGCCACCAAGGCCGTGCCTAGAGCAAAAACCAAGAAGACCCGGCGTGTGAA
GAGATCTAGGCCGAGGGCTGCCAGAGGGCTTCGGGGTGGGGTCGGGGGGTCGCCTGGGAG
CTCCAGGGGTCGCAGCAGGGCGCCGCAGGGGGTGAGGTGGAGGGTAACGGCGCCGAGGAG
GAGCAGGGCGCCCCGCCAGCCGAAATGATCCAGGAGGAGCTGCAAGGCGGGCGCCAGGAG
CAGCGAGGAGGCCCCGTTGCCCGTGAGGGCCAGCCCCACGGCCAAGACTCGACGGCGGGA
GAAGTAACGTGAGAGGGTCCCAAGGGCAGGGGCGAACACCAGGGCCCAGCCGGCGCCAGC
AAGGACGCCCAGGCCAAGATAGAGGTGCAGCAGACTGCGGGCGAAAGCCGAGAAAACGAA
GCCGAGCGAGGTGAGGACGCCTCCAACCATCACAACCGGGCGCGCCCCCCAGCGGGTGCT
CAGGGCGCTGCCCACTGGGCTGGCTGCCTGCTGCACCGCCAAGGCCAGGGCGCTGACCCA
CGCAGTGTCCTGGCGAGGCCCAGGAAAATGCTCCGCGAGGTCAGGGAGGGCGAGGCCCAG
GGAGCGTAACAGCCCGTAGGAGAGCCCATTCACCACGAAGGCTGCGGCCGCCACCACCCA
GCCCCAGCCCCCGTCCGGGGGTCCGGCTGGCTTGGGGGTCATCGCCGCCCGACCTCTCCC
GGCGGTGCGGGGAGGGGAAGGGCGAGGAATGGCTCGGCCCGGTTTTCTCCCCGCTTTCCG
GGCGGGCGGGGCCCCAGAGGGGAGAGAATGCCGAGATGGAGCCCAACTTGCACAGGCTCT
CCGGGTAAACAG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q5NC33_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5NC33_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-480, gnl|bosTau2|chr19 (14698417-14698896)
               

               
               1-480, gnl|Hg17|chr17 (6886331-6886810)
               

               
               1-480, gnl|Mm7|chr11 (70297333-70296854)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-480, gnl|bosTau2|chr19 (14698417-14698896)
               

               
               1-480, gnl|Hg17|chr17 (6886331-6886810)
               

               
               1-480, gnl|Mm7|chr11 (70297333-70296854)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	1-480, gnl\|bosTau2\|chr19 (14698417-14698896)
	1-480, gnl\|Hg17\|chr17 (6886331-6886810)
	1-480, gnl\|Mm7\|chr11 (70297333-70296854)