Ss1.1-Utr1-UTR010015G09.5
|
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCTCAACGACCACCTT
TATTGGACACTCAGCTCCAGGGCTCCAGCGTGAGTGGGAAGGGAGGGGGTGTCACTGGAG
CAGGGACCCTCCGACGGGAGGTGTGGCCAGCGATGCCACCTAGCCCCCAGGACACTCGCC
GAAGCCCCTGGACATCTCTGTAACCCTCAGAGCTGATCCAGCGGGAGGGCATGTGGGGTC
ACGACCCTGACCGCCCACAGGGCGGCTCCCCCAGTTCCAGGCTCACTTGGGGGCATTGAA
GGGCATGACCCGCTGGTTCATGGGGTTGTCTGGTGAACGCAGCCACTCCTTCTTGAGCAG
CTGCTTCAGCTGCGACAGCCGCATGTTGGGGTTTTCTTGCTTGAGCCGCGGCAGCTGCGC
CTCCTCGAAGGCGGTGAAGGCCGCCCGCATGCGGCGCTCAGGATGTCGGTCTGCAGCCTC
CTCCGCCAAGCTGAGCACCGCAATGGCATCCTCGATGGTGCGCGCCTCTACGCTGCCCTC
CTCCAGCACGCGGCGGTTCACGTTCTCCTCCAGGGGTACCTCCAAGTGGCTCTTGGCTTT
CTCGGCTGCATCTGAGGCTTCCTTGTGCTGATGGTCTCGGCGGAGCGTCTCCTCAATCTG
GGCGCGGGTGACCTTGCTGGGCGCAGCTACCCGGGGGGCCTTGCCCCCCTTGAGCTTTGA
ATCCTCCTCTTCTAGCAGGCGCTGCGTCTCCTTCTTGCGCTCCAGCTGTTCCAGGCGCCG
CTTCTCCTTCTCCTCCTTGCGCTGTTCCTTCCTCATGACGTGTTTGTCCTCATCCTTCCA
ATAGGCATCCTCCAGCTCTTTCTGCTTCTTGGCATCAGCTGCTGCCTTGGCCTCAGCCCT
CCGTGCCCGGGCCGCTGCCGACTTGGTGTTCTCACCCTGGAACTTCTTGGGCATCCCTCA
GCAGGCTCCTTCCCCCGGCGCCGGCCCGGTCGCGCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCTCAACGACCACCTT
TATTGGACACTCAGCTCCAGGGCTCCAGCGTGAGTGGGAAGGGAGGGGGTGTCACTGGAG
CAGGGACCCTCCGACGGGAGGTGTGGCCAGCGATGCCACCTAGCCCCCAGGACACTCGCC
GAAGCCCCTGGACATCTCTGTAACCCTCAGAGCTGATCCAGCGGGAGGGCATGTGGGGTC
ACGACCCTGACCGCCCACAGGGCGGCTCCCCCAGTTCCAGGCTCACTTGGGGGCATTGAA
GGGCATGACCCGCTGGTTCATGGGGTTGTCTGGTGAACGCAGCCACTCCTTCTTGAGCAG
CTGCTTCAGCTGCGACAGCCGCATGTTGGGGTTTTCTTGCTTGAGCCGCGGCAGCTGCGC
CTCCTCGAAGGCGGTGAAGGCCGCCCGCATGCGGCGCTCAGGATGTCGGTCTGCAGCCTC
CTCCGCCAAGCTGAGCACCGCAATGGCATCCTCGATGGTGCGCGCCTCTACGCTGCCCTC
CTCCAGCACGCGGCGGTTCACGTTCTCCTCCAGGGGTACCTCCAAGTGGCTCTTGGCTTT
CTCGGCTGCATCTGAGGCTTCCTTGTGCTGATGGTCTCGGCGGAGCGTCTCCTCAATCTG
GGCGCGGGTGACCTTGCTGGGCGCAGCTACCCGGGGGGCCTTGCCCCCCTTGAGCTTTGA
ATCCTCCTCTTCTAGCAGGCGCTGCGTCTCCTTCTTGCGCTCCAGCTGTTCCAGGCGCCG
CTTCTCCTTCTCCTCCTTGCGCTGTTCCTTCCTCATGACGTGTTTGTCCTCATCCTTCCA
ATAGGCATCCTCCAGCTCTTTCTGCTTCTTGGCATCAGCTGCTGCCTTGGCCTCAGCCCT
CCGTGCCCGGGCCGCTGCCGACTTGGTGTTCTCACCCTGGAACTTCTTGGGCATCCCTCA
GCAGGCTCCTTCCCCCGGCGCCGGCCCGGTCGCGCC
|
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gi|61867128|ref|XP_587975.1| |
Protein identifier
|
gi|61867128|ref|XP_587975.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
43-493, gnl|bosTau2|chr7 (4486384-4486832) |
|
43-493, gnl|Hg17|chr19 (17915783-17915314) |
|
43-493, gnl|Mm7|chr8 (69322735-69323153) |
| |
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606-797, gnl|bosTau2|chr7 (4487593-4487784) |
|
606-797, gnl|canFam2|chr20 (47980106-47979929) |
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606-797, gnl|danRer3|chr8 (6019591-6019433) |
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606-797, gnl|dasNov1|scaffold_81081 (4191-4348) |
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606-797, gnl|fr1|chrUn (280464482-280464301) |
|
606-797, gnl|galGal2|chrUn (46121596-46121756) |
|
606-797, gnl|hg17|chr19 (17914445-17914626) |
|
606-797, gnl|Hg17|chr19 (17914654-17914463) |
|
606-797, gnl|loxAfr1|scaffold_7992 (31950-31789) |
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606-797, gnl|mm7|chr8 (69323626-69323456) |
|
606-797, gnl|Mm7|chr8 (69323432-69323614) |
|
606-797, gnl|monDom2|scaffold_209 (845600-845764) |
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606-797, gnl|panTro1|chr20 (18906405-18906586) |
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606-797, gnl|rheMac2|chr19 (17513482-17513663) |
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606-797, gnl|rn3|chr16 (19079191-19079357) |
|
606-797, gnl|tetNig1|chr1 (14531998-14531837) |
|
606-797, gnl|xenTro1|scaffold_83 (466688-466529) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
43-493, gnl|bosTau2|chr7 (4486384-4486832) |
|
43-493, gnl|Hg17|chr19 (17915783-17915314) |
|
43-493, gnl|Mm7|chr8 (69322735-69323153) |
| |
|
606-797, gnl|bosTau2|chr7 (4487593-4487784) |
|
606-797, gnl|canFam2|chr20 (47980106-47979929) |
|
606-797, gnl|danRer3|chr8 (6019591-6019433) |
|
606-797, gnl|dasNov1|scaffold_81081 (4191-4348) |
|
606-797, gnl|fr1|chrUn (280464482-280464301) |
|
606-797, gnl|galGal2|chrUn (46121596-46121756) |
|
606-797, gnl|hg17|chr19 (17914445-17914626) |
|
606-797, gnl|Hg17|chr19 (17914654-17914463) |
|
606-797, gnl|loxAfr1|scaffold_7992 (31950-31789) |
|
606-797, gnl|mm7|chr8 (69323626-69323456) |
|
606-797, gnl|Mm7|chr8 (69323432-69323614) |
|
606-797, gnl|monDom2|scaffold_209 (845600-845764) |
|
606-797, gnl|panTro1|chr20 (18906405-18906586) |
|
606-797, gnl|rheMac2|chr19 (17513482-17513663) |
|
606-797, gnl|rn3|chr16 (19079191-19079357) |
|
606-797, gnl|tetNig1|chr1 (14531998-14531837) |
|
606-797, gnl|xenTro1|scaffold_83 (466688-466529) |
|
elu (0.385356) |
|
ton (0.351) |
|
eru (0.240096) |
|
ece (0.229305) |
|
nco (0.161734) |
|
pty (0.142714) |
|
hlv (0.139256) |
|
ute (0.132784) |
|
ese (0.126502) |
|
cly (0.120642) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
|
eje (0.0988338) |
|
elu (0.385356) |
|
ton (0.351) |
|
eru (0.240096) |
|
ece (0.229305) |
|
nco (0.161734) |
|
pty (0.142714) |
|
hlv (0.139256) |
|
ute (0.132784) |
|
ese (0.126502) |
|
cly (0.120642) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
|
eje (0.0988338) |
