Ss1.1-Utr1-UTR010017C05.5
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CAGAGGGTGGCTAGCTGCCCGCACTGCGGCACCCAGCGGGTTCTCAGAGCCCGGGTGGCT
GGCGGCTGGGGCGGCTGCGCGGCCGCCTCACTCCCCGCCCGCCCTGCCTGGGCTCTTTTT
CCGATCCCGGGGTTGGCTTCGGCGGGACCGGCAGTTGGCTGCTCTGCGCCCTTTTCTCCG
GTGACAACCTGGTGCTGAATCTTGAACCTGTGAAATGCCTTCTTAATTACATCTGAGAAA
AGGATCCTGTTTGAGTCAATACTTTACCCTATAACTCAATGTTCTCCATAAAGCTGAGAT
ATGCCCACGGTTGAAAGTGAAGCCACAGTGGAGACCAAAGTTCGTGTTGAGGAGTTGCTT
AAGGCCCACAATGATCTAATACGTGAAAGAAAAAAACTGAAGAAAAAAATTGGCAAATCT
GGAGAAAAAATCTCACTTGGCACCCTTAGAAGCAATCTTCAGAAAATCAAGGAAACGAAA
AGTGATGCCGTAAGTGCTGCTAACACCAATAACCCAGAGAAGAACATGCGAGTCACTAAA
AACAAACCAAGGGATCCACGGTCAGCACATTCAGAGCCAGATGATGATGTTAGTGTGGAG
GAAGACAAGCAAGAAAAGGCAAATAAAATACAAACAGCCCTCCAGGTGACTGCGCCGCAA
GAGGAACTGGAAACGCCGGAGAAGGAGGATGCCACACTTCAGAAAGCGCGGACCAAGCCA
CAGCCAGGCGGCACTCAGGAGAAAAGTGAGAAGGACGAGGAAGAAAGAGAAAATAAGAGT
GTAGATGAGGAGGAAGAACTGATGCGAGTATACCAGCTCCAGGTAGCTGAAGAAATGGCA
AAGGAGATTAAGAAGAAAATCAGAAAGAAACTCAAGGAGCAGCTAACTTACTTTCCCTCA
GATACTTCATTGCATGCTGACAAATTGAGCGGTGAAAAAAGAAAAAAGAAAAAGAAGAAA
GTTCCAATCCTGTCTCAGTCTGAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CAGAGGGTGGCTAGCTGCCCGCACTGCGGCACCCAGCGGGTTCTCAGAGCCCGGGTGGCT
GGCGGCTGGGGCGGCTGCGCGGCCGCCTCACTCCCCGCCCGCCCTGCCTGGGCTCTTTTT
CCGATCCCGGGGTTGGCTTCGGCGGGACCGGCAGTTGGCTGCTCTGCGCCCTTTTCTCCG
GTGACAACCTGGTGCTGAATCTTGAACCTGTGAAATGCCTTCTTAATTACATCTGAGAAA
AGGATCCTGTTTGAGTCAATACTTTACCCTATAACTCAATGTTCTCCATAAAGCTGAGAT
ATGCCCACGGTTGAAAGTGAAGCCACAGTGGAGACCAAAGTTCGTGTTGAGGAGTTGCTT
AAGGCCCACAATGATCTAATACGTGAAAGAAAAAAACTGAAGAAAAAAATTGGCAAATCT
GGAGAAAAAATCTCACTTGGCACCCTTAGAAGCAATCTTCAGAAAATCAAGGAAACGAAA
AGTGATGCCGTAAGTGCTGCTAACACCAATAACCCAGAGAAGAACATGCGAGTCACTAAA
AACAAACCAAGGGATCCACGGTCAGCACATTCAGAGCCAGATGATGATGTTAGTGTGGAG
GAAGACAAGCAAGAAAAGGCAAATAAAATACAAACAGCCCTCCAGGTGACTGCGCCGCAA
GAGGAACTGGAAACGCCGGAGAAGGAGGATGCCACACTTCAGAAAGCGCGGACCAAGCCA
CAGCCAGGCGGCACTCAGGAGAAAAGTGAGAAGGACGAGGAAGAAAGAGAAAATAAGAGT
GTAGATGAGGAGGAAGAACTGATGCGAGTATACCAGCTCCAGGTAGCTGAAGAAATGGCA
AAGGAGATTAAGAAGAAAATCAGAAAGAAACTCAAGGAGCAGCTAACTTACTTTCCCTCA
GATACTTCATTGCATGCTGACAAATTGAGCGGTGAAAAAAGAAAAAAGAAAAAGAAGAAA
GTTCCAATCCTGTCTCAGTCTGAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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310-435, gnl|bosTau2|chr9 (42769013-42769138) |
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310-435, gnl|canFam2|chr1 (31230294-31230494) |
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310-435, gnl|dasNov1|scaffold_11806 (46853-46650) |
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310-435, gnl|echTel1|scaffold_95622 (2805-3008) |
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310-435, gnl|galGal2|chr3 (54497053-54496868) |
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310-435, gnl|hg17|chr6 (135853449-135853651) |
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310-435, gnl|Hg17|chr6 (135853579-135853454) |
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310-435, gnl|loxAfr1|scaffold_22912 (15265-15465) |
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310-435, gnl|monDom2|scaffold_0 (75049273-75049079) |
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310-435, gnl|panTro1|chr5 (138637293-138637495) |
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310-435, gnl|rheMac2|chr4 (128337679-128337477) |
| |
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446-984, gnl|bosTau2|chr9 (42782000-42782541) |
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446-984, gnl|Hg17|chr6 (135829194-135828650) |
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446-984, gnl|Mm7|chr10 (20685677-20686130) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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310-435, gnl|bosTau2|chr9 (42769013-42769138) |
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310-435, gnl|canFam2|chr1 (31230294-31230494) |
|
310-435, gnl|dasNov1|scaffold_11806 (46853-46650) |
|
310-435, gnl|echTel1|scaffold_95622 (2805-3008) |
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310-435, gnl|galGal2|chr3 (54497053-54496868) |
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310-435, gnl|hg17|chr6 (135853449-135853651) |
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310-435, gnl|Hg17|chr6 (135853579-135853454) |
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310-435, gnl|loxAfr1|scaffold_22912 (15265-15465) |
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310-435, gnl|monDom2|scaffold_0 (75049273-75049079) |
|
310-435, gnl|panTro1|chr5 (138637293-138637495) |
|
310-435, gnl|rheMac2|chr4 (128337679-128337477) |
| |
|
446-984, gnl|bosTau2|chr9 (42782000-42782541) |
|
446-984, gnl|Hg17|chr6 (135829194-135828650) |
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446-984, gnl|Mm7|chr10 (20685677-20686130) |
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sme (0.305437) |
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cut (0.169924) |
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tbr (0.154178) |
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isp (0.150376) |
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ski (0.146735) |
|
sme (0.305437) |
|
cut (0.169924) |
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tbr (0.154178) |
|
isp (0.150376) |
|
ski (0.146735) |
