Ss1.1-Utr1-UTR010018D11.5
|
CCCACCTATTTGTGCCATAAGGGTGTTTTTTTGGGGGAAGGGGTGGCTGAAATTAAGGTT
TCAGTCTACCCATCTCCTGAGAATTCACTTCCTGCCCACTGCCGCCACCACTGGAGCGGG
GTGCTGGGTGCCCTTCCCAGGTTGTGGGGGGGGGGGCCTTTGACCAAGGACCCTCTTTAC
CTGCTTCTGGGCAGTGGTCTTGTCTCTTTACATGGGGCTTTAGCATTTCTGAGGTTTGGA
GATGAAGCGGGTTCTGTGCGATTTTTAGCACATCCATATCTTTTCTACGTTGAATGTCTG
GATCTTCTTTTTGTGCGTGTCTGTGTGTGTGCATATGTGTCCAAGTGTTTGCAGGTGGTG
GCAGTACATAGCGACTTAGCCACGGGGCCCCCTTTCCAGGGCCAGCCACAGCATGTTGGG
CAGCAGCGAGGGGGGTGATGAAGTGGGTGCTCGGTGGTGACAGGTCTTACTGGCACAGGC
CATTTCCGGGCATGTTCTCACAATCTGGTTGAAAACCATTGTGTTCTTCTCTGGACAGAA
TGAGATCTTCAGGTTGCCCGCACACCTGGGCTTAGCCCACAGGAGCGAGTGCTGGAGGCG
GGCCCTGCACAAACCCCCTGCAGAGGGCTGGGACTTGAGAATTGCCTTCTGGTCTTGTGT
GCCCACACTGGCTACCGAGGATGAAGCAGAAAGCGTGTCCTGCCTTTGCCATGTTGTGGG
CACAGCACAGCCAGGTCCCAGGCAGTGGTCACAGCCTTGGTGTTGGGAGGGTCCTGAGCA
CACCTGCTTTGGGTTAGGCACCCCCATGGAGCTGCATAGGAGCCTGGTCCCAACAGCTTA
GGGTCCCTCCTAGCCCCCATGTCTCTGACCCAAGCCTCAGATCCATGTGTACAGGGCAGG
GTGGCTGGTGTGACATGTGTGGGACTGGGGAGTTCTTTTGGGGACCGAAGGACTGGCAGA
TGTGTGTGGGAGGTACTGAGCAGGAGTGGCTCTGCTTCTGGACAGACTGGGGTTTTGTCC
AGGGTAGCTCAGCCCTGTGTCCTTGGGCCAGGCTGAAGGCCCCCATGCCACGCTTCTCTA
GGCCCTGCCTCCTGACCACTTTGTCTCCAGGAGCTGGTGTCCGAGGGGCTGAGCTCCACT
GGAGGGTAGGGTAGGGAAGCAGGGGAGAGCTGGGGTCAGTCATGAGGCCTGTGTGCTCAG
GTGAATCCCAAGACCAGCCTTGCTTGAGTCTTGTGCTCCTGTGATAGGCAGACACACTGG
GCCCTAGAGGGACAGGCCATACCTGACCTGCCTGGTGGAGGTGGTGTCACTACTCTACAT
TGTCTTAATGCCTGTTTGTTTTCCTTTCACTAAGGGTTTTTAGTTTGGGTTTATTTTTGG
TTGGGTTGGCACTAATTCTTAAGATGCTGTGAGAACCATTACATCCAAATGCCAAATAAA
TTTGTGTTCTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCCACCTATTTGTGCCATAAGGGTGTTTTTTTGGGGGAAGGGGTGGCTGAAATTAAGGTT
TCAGTCTACCCATCTCCTGAGAATTCACTTCCTGCCCACTGCCGCCACCACTGGAGCGGG
GTGCTGGGTGCCCTTCCCAGGTTGTGGGGGGGGGGGCCTTTGACCAAGGACCCTCTTTAC
CTGCTTCTGGGCAGTGGTCTTGTCTCTTTACATGGGGCTTTAGCATTTCTGAGGTTTGGA
GATGAAGCGGGTTCTGTGCGATTTTTAGCACATCCATATCTTTTCTACGTTGAATGTCTG
GATCTTCTTTTTGTGCGTGTCTGTGTGTGTGCATATGTGTCCAAGTGTTTGCAGGTGGTG
GCAGTACATAGCGACTTAGCCACGGGGCCCCCTTTCCAGGGCCAGCCACAGCATGTTGGG
CAGCAGCGAGGGGGGTGATGAAGTGGGTGCTCGGTGGTGACAGGTCTTACTGGCACAGGC
CATTTCCGGGCATGTTCTCACAATCTGGTTGAAAACCATTGTGTTCTTCTCTGGACAGAA
TGAGATCTTCAGGTTGCCCGCACACCTGGGCTTAGCCCACAGGAGCGAGTGCTGGAGGCG
GGCCCTGCACAAACCCCCTGCAGAGGGCTGGGACTTGAGAATTGCCTTCTGGTCTTGTGT
GCCCACACTGGCTACCGAGGATGAAGCAGAAAGCGTGTCCTGCCTTTGCCATGTTGTGGG
CACAGCACAGCCAGGTCCCAGGCAGTGGTCACAGCCTTGGTGTTGGGAGGGTCCTGAGCA
CACCTGCTTTGGGTTAGGCACCCCCATGGAGCTGCATAGGAGCCTGGTCCCAACAGCTTA
GGGTCCCTCCTAGCCCCCATGTCTCTGACCCAAGCCTCAGATCCATGTGTACAGGGCAGG
GTGGCTGGTGTGACATGTGTGGGACTGGGGAGTTCTTTTGGGGACCGAAGGACTGGCAGA
TGTGTGTGGGAGGTACTGAGCAGGAGTGGCTCTGCTTCTGGACAGACTGGGGTTTTGTCC
AGGGTAGCTCAGCCCTGTGTCCTTGGGCCAGGCTGAAGGCCCCCATGCCACGCTTCTCTA
GGCCCTGCCTCCTGACCACTTTGTCTCCAGGAGCTGGTGTCCGAGGGGCTGAGCTCCACT
GGAGGGTAGGGTAGGGAAGCAGGGGAGAGCTGGGGTCAGTCATGAGGCCTGTGTGCTCAG
GTGAATCCCAAGACCAGCCTTGCTTGAGTCTTGTGCTCCTGTGATAGGCAGACACACTGG
GCCCTAGAGGGACAGGCCATACCTGACCTGCCTGGTGGAGGTGGTGTCACTACTCTACAT
TGTCTTAATGCCTGTTTGTTTTCCTTTCACTAAGGGTTTTTAGTTTGGGTTTATTTTTGG
TTGGGTTGGCACTAATTCTTAAGATGCTGTGAGAACCATTACATCCAAATGCCAAATAAA
TTTGTGTTCTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
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152-337, gnl|bosTau2|chr17 (44448850-44449033) |
|
152-337, gnl|canFam2|chr26 (33207528-33207352) |
|
152-337, gnl|dasNov1|scaffold_67627 (268-449) |
|
152-337, gnl|echTel1|scaffold_234392 (3296-3454) |
|
152-337, gnl|galGal2|chr15 (7862716-7862517) |
|
152-337, gnl|hg17|chr22 (17399622-17399782) |
|
152-337, gnl|Hg17|chr22 (17399850-17399652) |
|
152-337, gnl|mm7|chr16 (17391107-17391281) |
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152-337, gnl|Mm7|chr16 (17391352-17391159) |
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152-337, gnl|monDom2|scaffold_141 (1611953-1612125) |
|
152-337, gnl|panTro1|chr23 (17316532-17316692) |
|
152-337, gnl|rheMac2|chr10 (63080123-63080279) |
|
152-337, gnl|rn3|chr11 (85172181-85172012) |
| |
|
1288-1457, gnl|bosTau2|chr17 (44449586-44449759) |
|
1288-1457, gnl|Hg17|chr22 (17398563-17398350) |
|
1288-1457, gnl|Mm7|chr16 (17390301-17390088) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
152-337, gnl|bosTau2|chr17 (44448850-44449033) |
|
152-337, gnl|canFam2|chr26 (33207528-33207352) |
|
152-337, gnl|dasNov1|scaffold_67627 (268-449) |
|
152-337, gnl|echTel1|scaffold_234392 (3296-3454) |
|
152-337, gnl|galGal2|chr15 (7862716-7862517) |
|
152-337, gnl|hg17|chr22 (17399622-17399782) |
|
152-337, gnl|Hg17|chr22 (17399850-17399652) |
|
152-337, gnl|mm7|chr16 (17391107-17391281) |
|
152-337, gnl|Mm7|chr16 (17391352-17391159) |
|
152-337, gnl|monDom2|scaffold_141 (1611953-1612125) |
|
152-337, gnl|panTro1|chr23 (17316532-17316692) |
|
152-337, gnl|rheMac2|chr10 (63080123-63080279) |
|
152-337, gnl|rn3|chr11 (85172181-85172012) |
| |
|
1288-1457, gnl|bosTau2|chr17 (44449586-44449759) |
|
1288-1457, gnl|Hg17|chr22 (17398563-17398350) |
|
1288-1457, gnl|Mm7|chr16 (17390301-17390088) |
|
ute (0.398353) |
|
elu (0.385356) |
|
nlu (0.383362) |
|
mcp (0.341297) |
|
cty (0.31224) |
|
cly (0.241284) |
|
ece (0.229305) |
|
fcc (0.197785) |
|
fbs (0.175346) |
|
duo (0.172801) |
|
fhi (0.169578) |
|
nje (0.16592) |
|
csp (0.161186) |
|
cli (0.152812) |
|
hlv (0.139256) |
|
che (0.136314) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
eep (0.122564) |
|
clu (0.119646) |
|
ecc (0.115035) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
|
ute (0.398353) |
|
elu (0.385356) |
|
nlu (0.383362) |
|
mcp (0.341297) |
|
cty (0.31224) |
|
cly (0.241284) |
|
ece (0.229305) |
|
fcc (0.197785) |
|
fbs (0.175346) |
|
duo (0.172801) |
|
fhi (0.169578) |
|
nje (0.16592) |
|
csp (0.161186) |
|
cli (0.152812) |
|
hlv (0.139256) |
|
che (0.136314) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
eep (0.122564) |
|
clu (0.119646) |
|
ecc (0.115035) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
