Non-Coding RNA Search

Ss1.1-Utr1-UTR010018F02.5

Sequence:


               
               TTTGCAAAGAAGAAAAGGGAGGTTATTTAACCAGAAAGGCCCTCTGAAAATTACAGATTC
CTGTACAGTCAGCATTAATATGCTGCTTTTCAAACAATAAAAGGGGGAATTGAATTGCAA
GAGTGTCGGTGATAAAGGGCGCGTTTGTGAAATGATACCCTGATTGGTGTCCCTGCCTTT
GGAATGGCTGACGAGGTCTAATTGGCATATAATGCCCTATAAATTTATTAGCGGGCCTCA
CCTCTCATTGGCAGACCTTCTCCTGTTAACCACCAGGAAATTACCAATTTTCAGGAGTTA
GTCACTCAAGTCATACTCTAACTGGATTTAGAAAAAAAAAAAAAAAAAATCCACGCCGCT
CATGTTATAAATCAGGCTGATGCCTCGGACCGCAGCTCTCCAGCTGCAGATTCATCGCAC
GGGTAGGGAAGTTTGGGGCGAGTGGATGGCAGGGAAGAGCCCGAATTTACTGGGAAACCC
ACTGCGCCCCGCTCCTCCGCCCACTACCCCTGCCCGGGGGCCCCTTCGGCTTGGGCCCCG
TGGGGCCGGGCAGAACTTGCCGTTTTGTGGCTGTTCTCGTCCAGTGCTTTGATGTTCCCG
GGGACGCATTCAACCCCCGGGCATGTCACGCAAAGAGGACACAGCCACCCTCTTATTTCG
GGAGCATAACAGAAATATTCAGGAGCAGACATAATTACTCCAATTACTTCTCTCTGGTGT
TGGAGACACACTCACAAGTCACAAATTAGAAAATAATATTCACATGTTTCTTCTAATGGG
GAACAGATTAGAGGCATTTTATCTTTTTTAAATAATTTCCAAATGTGCCCTGGAGAGACG
GGAAGGGGCGGGAGAAAGGTGTGGAAACTCAGGCAACGCTTGGCTTTGCTGGGGGAACCA
GAGGGTGCCCCCCCCCACTTTGGGCCAGGACCTGGGGGTGGCGAGGTGCGGGGTGCGCTC
TGGCAGCGGGCCTGCGGGGCTCCAGTGGCTGTGATCTTCCTCGCTGTTCTCCTGCTGGCA
ACTCGCAGAGACAAGACGGTGTTTCCAAGCCCGACACCTTGTAACTCAGTCCTTGCTTGT
AAGTGCACGTGTGAGCCCCCTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGCAAAGAAGAAAAGGGAGGTTATTTAACCAGAAAGGCCCTCTGAAAATTACAGATTC
CTGTACAGTCAGCATTAATATGCTGCTTTTCAAACAATAAAAGGGGGAATTGAATTGCAA
GAGTGTCGGTGATAAAGGGCGCGTTTGTGAAATGATACCCTGATTGGTGTCCCTGCCTTT
GGAATGGCTGACGAGGTCTAATTGGCATATAATGCCCTATAAATTTATTAGCGGGCCTCA
CCTCTCATTGGCAGACCTTCTCCTGTTAACCACCAGGAAATTACCAATTTTCAGGAGTTA
GTCACTCAAGTCATACTCTAACTGGATTTAGAAAAAAAAAAAAAAAAAATCCACGCCGCT
CATGTTATAAATCAGGCTGATGCCTCGGACCGCAGCTCTCCAGCTGCAGATTCATCGCAC
GGGTAGGGAAGTTTGGGGCGAGTGGATGGCAGGGAAGAGCCCGAATTTACTGGGAAACCC
ACTGCGCCCCGCTCCTCCGCCCACTACCCCTGCCCGGGGGCCCCTTCGGCTTGGGCCCCG
TGGGGCCGGGCAGAACTTGCCGTTTTGTGGCTGTTCTCGTCCAGTGCTTTGATGTTCCCG
GGGACGCATTCAACCCCCGGGCATGTCACGCAAAGAGGACACAGCCACCCTCTTATTTCG
GGAGCATAACAGAAATATTCAGGAGCAGACATAATTACTCCAATTACTTCTCTCTGGTGT
TGGAGACACACTCACAAGTCACAAATTAGAAAATAATATTCACATGTTTCTTCTAATGGG
GAACAGATTAGAGGCATTTTATCTTTTTTAAATAATTTCCAAATGTGCCCTGGAGAGACG
GGAAGGGGCGGGAGAAAGGTGTGGAAACTCAGGCAACGCTTGGCTTTGCTGGGGGAACCA
GAGGGTGCCCCCCCCCACTTTGGGCCAGGACCTGGGGGTGGCGAGGTGCGGGGTGCGCTC
TGGCAGCGGGCCTGCGGGGCTCCAGTGGCTGTGATCTTCCTCGCTGTTCTCCTGCTGGCA
ACTCGCAGAGACAAGACGGTGTTTCCAAGCCCGACACCTTGTAACTCAGTCCTTGCTTGT
AAGTGCACGTGTGAGCCCCCTTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-1094, gnl|bosTau2|chr3 (82182862-82183946)
               

               
               1-1094, gnl|Hg17|chr2 (236780257-236781343)
               

               
               1-1094, gnl|Mm7|chr1 (89777664-89778664)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1094, gnl|bosTau2|chr3 (82182862-82183946)
               

               
               1-1094, gnl|Hg17|chr2 (236780257-236781343)
               

               
               1-1094, gnl|Mm7|chr1 (89777664-89778664)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               csk (0.140746)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csk (0.140746)

	1-1094, gnl\|bosTau2\|chr3 (82182862-82183946)
	1-1094, gnl\|Hg17\|chr2 (236780257-236781343)
	1-1094, gnl\|Mm7\|chr1 (89777664-89778664)