Non-Coding RNA Search

Ss1.1-Utr1-UTR010019B03.5

Sequence:


               
               CCCTCCAGAAAACACAGGGCACACCTACCATGTGACTGACGCCACACCAAGACCCCCCAG
CCCCTCCTTATAGCACAAATGCAGCCCCAGATGGTAATTAAGTGAATGTAGGCAGCTTGG
GGACCTGTGGTCTAAAAATTCACATGTTGAGTTGAGCAGTCAGGTGAGATAGAAAATTCT
AGAAAATCCATGTGTTCATGCCTGCATGCATTCATCTCGTCCACAAATATTCACCCAGTG
CCCATTCGGGAGCAGTTCCTGCTGTAGATAGAGATGTCGGGGGGCCCAGGCTGTGTCCGA
GGGAGAGGCTGGGGTCACCTGTGAAATGACTCGTTGTGCCTAACAGTTAGGAATGCTCAA
ATCCACAAGAGAATAAGTGACCTTGGAGGTGGCATTGACCCCCCCTGCCCCCAAATTCCC
AGTCCGAGACGCTGCTAGACAGTTGGTGCTAGATAGATGCCTGGTGAGTGAGCGGCTTTG
ACTCTTAGTCACACTGTCCCTAAAACTCCTATCTTTGCGTCAAAGCCCTGACCCATTTGC
CCCTGACGGACTAAAATCCAGGACTGCTGCAGTGCCCTGCTCCAGCGGGCACTGTTTCTA
CAGGCTGCATCGTGCACAGCAACCTTGGGTTTGTGCAGTGAGGTGCCCCGTGAATTGCCC
CCTAAAATATGCAGGATCCCATCAAAGTCAGCAAATCCCCAGGGAGGGTCTCCACGCCCG
TGATGGAAAGTTACAGATGACATGGCCTCCGTGGGCATCCAGTGTGGCCCCAACTGAAAC
CAAACTGGTGCCTGGAGAGACTCTCTTCTTGGAACCTCACCTCGACTCCTTCCTGCCTCT
TCTCCATCTCCCAGGTGAAAGCTAGTGGGATAGTCAGTCCGATGACGGAACCGCCAGAGT
CTGGGTGACGGGCAGTCACGGAGCGGGGACGGCGAGGCTGAGGGGCTCAGTCACCTGCCA
AAGCAGGACCCCCAAGGTCAGTACGACCTCCCCAGGCGTAGCTGGACAGGGGTGCAGCCG
CCGTGGGACAGCCTCGTCTCCTGCTTACCCCCACTTCACGTGAGCGGCATGGGTCTCTCT
GAGAGCTGATAACCGGGAAAACCAAAAACCAATATTATTCCTAATAATAATAATATAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCTCCAGAAAACACAGGGCACACCTACCATGTGACTGACGCCACACCAAGACCCCCCAG
CCCCTCCTTATAGCACAAATGCAGCCCCAGATGGTAATTAAGTGAATGTAGGCAGCTTGG
GGACCTGTGGTCTAAAAATTCACATGTTGAGTTGAGCAGTCAGGTGAGATAGAAAATTCT
AGAAAATCCATGTGTTCATGCCTGCATGCATTCATCTCGTCCACAAATATTCACCCAGTG
CCCATTCGGGAGCAGTTCCTGCTGTAGATAGAGATGTCGGGGGGCCCAGGCTGTGTCCGA
GGGAGAGGCTGGGGTCACCTGTGAAATGACTCGTTGTGCCTAACAGTTAGGAATGCTCAA
ATCCACAAGAGAATAAGTGACCTTGGAGGTGGCATTGACCCCCCCTGCCCCCAAATTCCC
AGTCCGAGACGCTGCTAGACAGTTGGTGCTAGATAGATGCCTGGTGAGTGAGCGGCTTTG
ACTCTTAGTCACACTGTCCCTAAAACTCCTATCTTTGCGTCAAAGCCCTGACCCATTTGC
CCCTGACGGACTAAAATCCAGGACTGCTGCAGTGCCCTGCTCCAGCGGGCACTGTTTCTA
CAGGCTGCATCGTGCACAGCAACCTTGGGTTTGTGCAGTGAGGTGCCCCGTGAATTGCCC
CCTAAAATATGCAGGATCCCATCAAAGTCAGCAAATCCCCAGGGAGGGTCTCCACGCCCG
TGATGGAAAGTTACAGATGACATGGCCTCCGTGGGCATCCAGTGTGGCCCCAACTGAAAC
CAAACTGGTGCCTGGAGAGACTCTCTTCTTGGAACCTCACCTCGACTCCTTCCTGCCTCT
TCTCCATCTCCCAGGTGAAAGCTAGTGGGATAGTCAGTCCGATGACGGAACCGCCAGAGT
CTGGGTGACGGGCAGTCACGGAGCGGGGACGGCGAGGCTGAGGGGCTCAGTCACCTGCCA
AAGCAGGACCCCCAAGGTCAGTACGACCTCCCCAGGCGTAGCTGGACAGGGGTGCAGCCG
CCGTGGGACAGCCTCGTCTCCTGCTTACCCCCACTTCACGTGAGCGGCATGGGTCTCTCT
GAGAGCTGATAACCGGGAAAACCAAAAACCAATATTATTCCTAATAATAATAATATAATG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-1140, gnl|bosTau2|chr4 (37333972-37335112)
               

               
               1-1140, gnl|Hg17|chr22 (42965790-42964566)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1140, gnl|bosTau2|chr4 (37333972-37335112)
               

               
               1-1140, gnl|Hg17|chr22 (42965790-42964566)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               ece (0.229305)
               

               
               tes (0.207814)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               tes (0.207814)
               

               
               ebs (0.118301)

	1-1140, gnl\|bosTau2\|chr4 (37333972-37335112)
	1-1140, gnl\|Hg17\|chr22 (42965790-42964566)